RNA–Protein interactions for RNA: ENST00000355572.6

PDLIM7-201, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best) BASIC

Gene PDLIM7, Length 977 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-201ENST00000355572 KDM5DQ9BY66 1539 aa26.28■■□□□ 1.8
PDLIM7-201ENST00000355572 TSPY4P0CV99 314 aa26.27■■□□□ 1.8
PDLIM7-201ENST00000355572 TSPY10P0CW01 314 aa26.27■■□□□ 1.8
PDLIM7-201ENST00000355572 EIF2AK4Q9P2K8 1649 aaKnown RBP26.26■■□□□ 1.79
PDLIM7-201ENST00000355572 CEP152O94986 1710 aa26.25■■□□□ 1.79
PDLIM7-201ENST00000355572 CEP170BQ9Y4F5 1589 aaPredicted RBP26.24■■□□□ 1.79
PDLIM7-201ENST00000355572 CAMSAP1Q5T5Y3 1602 aa26.24■■□□□ 1.79
PDLIM7-201ENST00000355572 DAPK1P53355 1430 aa26.23■■□□□ 1.79
PDLIM7-201ENST00000355572 SHANK2Q9UPX8 1470 aa26.22■■□□□ 1.79
PDLIM7-201ENST00000355572 FBXO31Q5XUX0 539 aaPredicted RBP26.21■■□□□ 1.79
PDLIM7-201ENST00000355572 PPP6R1Q9UPN7 881 aa26.21■■□□□ 1.79
PDLIM7-201ENST00000355572 NCOA1Q15788 1441 aa26.21■■□□□ 1.79
PDLIM7-201ENST00000355572 FAM135AQ9P2D6 1515 aa26.2■■□□□ 1.79
PDLIM7-201ENST00000355572 ABCC3O15438 1527 aa26.19■■□□□ 1.78
PDLIM7-201ENST00000355572 DUOX2Q9NRD8 1548 aa26.19■■□□□ 1.78
PDLIM7-201ENST00000355572 PZPP20742 1482 aa26.19■■□□□ 1.78
PDLIM7-201ENST00000355572 CFAP65Q6ZU64 1925 aaKnown RBP26.18■■□□□ 1.78
PDLIM7-201ENST00000355572 ZC3H13Q5T200 1668 aaKnown RBP26.18■■□□□ 1.78
PDLIM7-201ENST00000355572 KIF15Q9NS87 1388 aa26.15■■□□□ 1.78
PDLIM7-201ENST00000355572 WASHC2CQ9Y4E1 1318 aa26.14■■□□□ 1.77
PDLIM7-201ENST00000355572 DEPDC5O75140 1603 aa26.13■■□□□ 1.77
PDLIM7-201ENST00000355572 RRP7BPQ9NSQ0 103 aa26.12■■□□□ 1.77
PDLIM7-201ENST00000355572 PTPRTO14522 1441 aa26.12■■□□□ 1.77
PDLIM7-201ENST00000355572 A2ML1A8K2U0 1454 aa26.11■■□□□ 1.77
PDLIM7-201ENST00000355572 PRDM15P57071 1507 aaPredicted RBP26.11■■□□□ 1.77
PDLIM7-201ENST00000355572 TNRQ92752 1358 aa26.1■■□□□ 1.77
PDLIM7-201ENST00000355572 CHIC2Q9UKJ5 165 aa26.1■■□□□ 1.77
PDLIM7-201ENST00000355572 NCKAP5LQ9HCH0 1330 aa26.1■■□□□ 1.77
PDLIM7-201ENST00000355572 FBXO41Q8TF61 875 aa26.09■■□□□ 1.77
PDLIM7-201ENST00000355572 SPATA31D1Q6ZQQ2 1576 aa26.07■■□□□ 1.76
PDLIM7-201ENST00000355572 LTBP4Q8N2S1 1624 aa26.07■■□□□ 1.76
PDLIM7-201ENST00000355572 ERBINQ96RT1 1412 aa26.07■■□□□ 1.76
PDLIM7-201ENST00000355572 PLA2R1Q13018 1463 aa26.07■■□□□ 1.76
PDLIM7-201ENST00000355572 PPARGC1BQ86YN6 1023 aaKnown RBP26.07■■□□□ 1.76
PDLIM7-201ENST00000355572 POLR1AO95602 1720 aaPredicted RBP26.06■■□□□ 1.76
PDLIM7-201ENST00000355572 CERKQ8TCT0 537 aa26.05■■□□□ 1.76
PDLIM7-201ENST00000355572 ADGRL2O95490 1459 aa26.04■■□□□ 1.76
PDLIM7-201ENST00000355572 NEURL4Q96JN8 1562 aa26.04■■□□□ 1.76
PDLIM7-201ENST00000355572 ERVK-7P63135 1459 aa26.04■■□□□ 1.76
PDLIM7-201ENST00000355572 FAM50AQ14320 339 aaKnown RBP26.02■■□□□ 1.76
PDLIM7-201ENST00000355572 DMRT2Q9Y5R5 561 aa26.02■■□□□ 1.76
PDLIM7-201ENST00000355572 VWDEQ8N2E2 1590 aa26.01■■□□□ 1.75
PDLIM7-201ENST00000355572 ANKRD30AQ9BXX3 1397 aa25.99■■□□□ 1.75
PDLIM7-201ENST00000355572 NLRP1Q9C000 1473 aa25.97■■□□□ 1.75
PDLIM7-201ENST00000355572 UBR1Q8IWV7 1749 aa25.97■■□□□ 1.75
PDLIM7-201ENST00000355572 UGGT1Q9NYU2 1555 aa25.96■■□□□ 1.75
PDLIM7-201ENST00000355572 GRWD1Q9BQ67 446 aaKnown RBP eCLIP25.95■■□□□ 1.74
PDLIM7-201ENST00000355572 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP25.95■■□□□ 1.742e-6■■■■□ 23.1
PDLIM7-201ENST00000355572 ZNF335Q9H4Z2 1342 aaPredicted RBP25.92■■□□□ 1.74
PDLIM7-201ENST00000355572 LMTK2Q8IWU2 1503 aa25.92■■□□□ 1.74
PDLIM7-201ENST00000355572 ARHGAP31Q2M1Z3 1444 aa25.91■■□□□ 1.74
PDLIM7-201ENST00000355572 PKD2Q13563 968 aa25.91■■□□□ 1.74
PDLIM7-201ENST00000355572 PIK3C2BO00750 1634 aa25.89■■□□□ 1.74
PDLIM7-201ENST00000355572 SYNMO15061 1565 aa25.88■■□□□ 1.73
PDLIM7-201ENST00000355572 EFCAB6Q5THR3 1501 aa25.87■■□□□ 1.73
PDLIM7-201ENST00000355572 ANKRD50Q9ULJ7 1429 aa25.87■■□□□ 1.73
PDLIM7-201ENST00000355572 UNC13BO14795 1591 aa25.86■■□□□ 1.73
PDLIM7-201ENST00000355572 STRCP1A6NGW2 1772 aa25.84■■□□□ 1.73
PDLIM7-201ENST00000355572 IQGAP1P46940 1657 aa25.83■■□□□ 1.73
PDLIM7-201ENST00000355572 MED14O60244 1454 aa25.81■■□□□ 1.72
PDLIM7-201ENST00000355572 KANK1Q14678 1352 aa25.81■■□□□ 1.72
PDLIM7-201ENST00000355572 TET3O43151 1660 aa25.8■■□□□ 1.72
PDLIM7-201ENST00000355572 THEMISQ8N1K5 641 aaPredicted RBP25.8■■□□□ 1.72
PDLIM7-201ENST00000355572 GCC2Q8IWJ2 1684 aa25.8■■□□□ 1.72
PDLIM7-201ENST00000355572 MYO5BQ9ULV0 1848 aa25.79■■□□□ 1.72
PDLIM7-201ENST00000355572 ITGAEP38570 1179 aa25.78■■□□□ 1.72
PDLIM7-201ENST00000355572 NPHP4O75161 1426 aaPredicted RBP25.78■■□□□ 1.72
PDLIM7-201ENST00000355572 NOS1P29475 1434 aa25.78■■□□□ 1.72
PDLIM7-201ENST00000355572 ARHGAP23Q9P227 1491 aa25.78■■□□□ 1.72
PDLIM7-201ENST00000355572 E9PCH4 1651 aa25.77■■□□□ 1.72
PDLIM7-201ENST00000355572 ROCK1Q13464 1354 aa25.77■■□□□ 1.72
PDLIM7-201ENST00000355572 ANKLE2Q86XL3 938 aa25.76■■□□□ 1.71
PDLIM7-201ENST00000355572 IQSEC2Q5JU85 1478 aa25.76■■□□□ 1.71
PDLIM7-201ENST00000355572 SLIT1O75093 1534 aa25.76■■□□□ 1.71
PDLIM7-201ENST00000355572 IQGAP3Q86VI3 1631 aa25.74■■□□□ 1.71
PDLIM7-201ENST00000355572 RRBP1Q9P2E9 1410 aaKnown RBP25.74■■□□□ 1.71
PDLIM7-201ENST00000355572 KDM5AP29375 1690 aaKnown RBP25.74■■□□□ 1.71
PDLIM7-201ENST00000355572 LTKP29376 864 aa25.72■■□□□ 1.71
PDLIM7-201ENST00000355572 IDI1Q13907 227 aa25.71■■□□□ 1.71
PDLIM7-201ENST00000355572 SCAF11Q99590 1463 aaKnown RBP25.7■■□□□ 1.7
PDLIM7-201ENST00000355572 ADGRB3O60242 1522 aa25.68■■□□□ 1.7
PDLIM7-201ENST00000355572 RPRD2Q5VT52 1461 aaKnown RBP25.66■■□□□ 1.7
PDLIM7-201ENST00000355572 CPS1P31327 1500 aa25.65■■□□□ 1.7
PDLIM7-201ENST00000355572 ALKQ9UM73 1620 aa25.64■■□□□ 1.7
PDLIM7-201ENST00000355572 XIRP1Q702N8 1843 aaKnown RBP25.64■■□□□ 1.7
PDLIM7-201ENST00000355572 TMEM2Q9UHN6 1383 aa25.64■■□□□ 1.69
PDLIM7-201ENST00000355572 TMEM131LA2VDJ0 1609 aa25.63■■□□□ 1.69
PDLIM7-201ENST00000355572 TXNDC2Q86VQ3 553 aa25.61■■□□□ 1.69
PDLIM7-201ENST00000355572 NUP155O75694 1391 aa25.58■■□□□ 1.69
PDLIM7-201ENST00000355572 LRRC7Q96NW7 1537 aa25.58■■□□□ 1.68
PDLIM7-201ENST00000355572 NAIPQ13075 1403 aa25.57■■□□□ 1.68
PDLIM7-201ENST00000355572 SPHKAPQ2M3C7 1700 aa25.55■■□□□ 1.68
PDLIM7-201ENST00000355572 UBAP1LF5GYI3 381 aa25.55■■□□□ 1.68
PDLIM7-201ENST00000355572 ZFYVE9O95405 1425 aa25.54■■□□□ 1.68
PDLIM7-201ENST00000355572 STAG3Q9UJ98 1225 aa25.54■■□□□ 1.68
PDLIM7-201ENST00000355572 SLC52A1Q9NWF4 448 aa25.52■■□□□ 1.68
PDLIM7-201ENST00000355572 SENP3Q9H4L4 574 aaPredicted RBP25.51■■□□□ 1.67
PDLIM7-201ENST00000355572 EID1Q9Y6B2 187 aa25.49■■□□□ 1.67
PDLIM7-201ENST00000355572 RIMS2Q9UQ26 1411 aa25.47■■□□□ 1.67
PDLIM7-201ENST00000355572 SLC26A8Q96RN1 970 aa25.46■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms