RNA–Protein interactions for RNA: ENST00000355500.1

COMMD9-202, Transcript of COMM domain containing 9, humanhuman

TSL 2

Gene COMMD9, Length 2,738 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD9-202ENST00000355500 FER1L4A9Z1Z3 1794 aa11.59□□□□□ -0.55
COMMD9-202ENST00000355500 PTPRKQ15262 1439 aa11.59□□□□□ -0.55
COMMD9-202ENST00000355500 ADGRL2O95490 1459 aa11.59□□□□□ -0.55
COMMD9-202ENST00000355500 SHANK2Q9UPX8 1470 aa11.59□□□□□ -0.55
COMMD9-202ENST00000355500 DIEXFQ68CQ4 756 aaKnown RBP11.58□□□□□ -0.56
COMMD9-202ENST00000355500 MLH3Q9UHC1 1453 aa11.57□□□□□ -0.56
COMMD9-202ENST00000355500 ZNF518AQ6AHZ1 1483 aa11.56□□□□□ -0.56
COMMD9-202ENST00000355500 C9orf84Q5VXU9 1444 aa11.56□□□□□ -0.56
COMMD9-202ENST00000355500 IGSF3O75054 1194 aa11.56□□□□□ -0.56
COMMD9-202ENST00000355500 FAM50AQ14320 339 aaKnown RBP11.56□□□□□ -0.56
COMMD9-202ENST00000355500 ATP10AO60312 1499 aa11.56□□□□□ -0.56
COMMD9-202ENST00000355500 PLEKHD1A6NEE1 506 aa11.56□□□□□ -0.56
COMMD9-202ENST00000355500 ARHGEF5Q12774 1597 aa11.56□□□□□ -0.56
COMMD9-202ENST00000355500 DAPK1P53355 1430 aa11.55□□□□□ -0.56
COMMD9-202ENST00000355500 RIMS1Q86UR5 1692 aaKnown RBP11.55□□□□□ -0.56
COMMD9-202ENST00000355500 ATP1B4Q9UN42 357 aaPredicted RBP11.55□□□□□ -0.56
COMMD9-202ENST00000355500 IQSEC2Q5JU85 1478 aa11.55□□□□□ -0.56
COMMD9-202ENST00000355500 CDC42BPAQ5VT25 1732 aa11.55□□□□□ -0.56
COMMD9-202ENST00000355500 CDC42BPBQ9Y5S2 1711 aa11.54□□□□□ -0.56
COMMD9-202ENST00000355500 LMTK3Q96Q04 1460 aa11.54□□□□□ -0.56
COMMD9-202ENST00000355500 CCDC136Q96JN2 1154 aa11.54□□□□□ -0.56
COMMD9-202ENST00000355500 SETD1BQ9UPS6 1966 aaKnown RBP11.53□□□□□ -0.56
COMMD9-202ENST00000355500 ABCC1P33527 1531 aa11.53□□□□□ -0.56
COMMD9-202ENST00000355500 CAMSAP2Q08AD1 1489 aa11.52□□□□□ -0.56
COMMD9-202ENST00000355500 GPATCH8Q9UKJ3 1502 aaKnown RBP11.52□□□□□ -0.57
COMMD9-202ENST00000355500 ANP32EQ9BTT0 268 aa11.52□□□□□ -0.57
COMMD9-202ENST00000355500 SIGLEC1Q9BZZ2 1709 aa11.52□□□□□ -0.57
COMMD9-202ENST00000355500 DIP2CQ9Y2E4 1556 aa11.51□□□□□ -0.57
COMMD9-202ENST00000355500 PLEKHH2Q8IVE3 1493 aa11.51□□□□□ -0.57
COMMD9-202ENST00000355500 ABCC5O15440 1437 aa11.5□□□□□ -0.57
COMMD9-202ENST00000355500 MAST1Q9Y2H9 1570 aa11.5□□□□□ -0.57
COMMD9-202ENST00000355500 KDM5DQ9BY66 1539 aa11.5□□□□□ -0.57
COMMD9-202ENST00000355500 CNTLNQ9NXG0 1405 aa11.5□□□□□ -0.57
COMMD9-202ENST00000355500 ZNF142P52746 1687 aaPredicted RBP11.48□□□□□ -0.57
COMMD9-202ENST00000355500 KDM2AQ9Y2K7 1162 aa11.48□□□□□ -0.57
COMMD9-202ENST00000355500 KIAA1107Q9UPP5 1409 aa11.48□□□□□ -0.57
COMMD9-202ENST00000355500 PLXNC1O60486 1568 aa11.47□□□□□ -0.57
COMMD9-202ENST00000355500 ITGAEP38570 1179 aa11.47□□□□□ -0.57
COMMD9-202ENST00000355500 KCNH8Q96L42 1107 aa11.46□□□□□ -0.57
COMMD9-202ENST00000355500 NPATQ14207 1427 aa11.46□□□□□ -0.57
COMMD9-202ENST00000355500 EFCAB2Q5VUJ9 269 aa11.46□□□□□ -0.58
COMMD9-202ENST00000355500 INO80Q9ULG1 1556 aaPredicted RBP11.46□□□□□ -0.58
COMMD9-202ENST00000355500 ABCA6Q8N139 1617 aa11.46□□□□□ -0.58
COMMD9-202ENST00000355500 KIDINS220Q9ULH0 1771 aa11.45□□□□□ -0.58
COMMD9-202ENST00000355500 PTPRTO14522 1441 aa11.45□□□□□ -0.58
COMMD9-202ENST00000355500 SCAPERQ9BY12 1400 aa11.45□□□□□ -0.58
COMMD9-202ENST00000355500 CFAP44Q96MT7 982 aa11.45□□□□□ -0.58
COMMD9-202ENST00000355500 NPM3O75607 178 aaKnown RBP11.44□□□□□ -0.58
COMMD9-202ENST00000355500 FBXO41Q8TF61 875 aa11.44□□□□□ -0.58
COMMD9-202ENST00000355500 C3P01024 1663 aa11.44□□□□□ -0.58
COMMD9-202ENST00000355500 FKBP8Q14318 412 aa11.44□□□□□ -0.58
COMMD9-202ENST00000355500 NCOA1Q15788 1441 aa11.42□□□□□ -0.58
COMMD9-202ENST00000355500 ARHGAP5Q13017 1502 aa11.42□□□□□ -0.58
COMMD9-202ENST00000355500 A0A0U1RQG5 324 aaPredicted RBP11.42□□□□□ -0.58
COMMD9-202ENST00000355500 SAMD9LQ8IVG5 1584 aa11.41□□□□□ -0.58
COMMD9-202ENST00000355500 PAXIP1Q6ZW49 1069 aaPredicted RBP11.41□□□□□ -0.58
COMMD9-202ENST00000355500 YEATS2Q9ULM3 1422 aa11.41□□□□□ -0.58
COMMD9-202ENST00000355500 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.41□□□□□ -0.58
COMMD9-202ENST00000355500 STRCQ7RTU9 1775 aa11.41□□□□□ -0.58
COMMD9-202ENST00000355500 RTEL1-TNFRSF6BF6WH68 1400 aa11.4□□□□□ -0.58
COMMD9-202ENST00000355500 PPP1R15AO75807 674 aaPredicted RBP11.4□□□□□ -0.58
COMMD9-202ENST00000355500 IRX6P78412 446 aaPredicted RBP11.4□□□□□ -0.58
COMMD9-202ENST00000355500 POLR1AO95602 1720 aaPredicted RBP11.4□□□□□ -0.58
COMMD9-202ENST00000355500 RPRD2Q5VT52 1461 aaKnown RBP11.4□□□□□ -0.58
COMMD9-202ENST00000355500 ANKRD30AQ9BXX3 1397 aa11.39□□□□□ -0.59
COMMD9-202ENST00000355500 RSPH4AQ5TD94 716 aa11.39□□□□□ -0.59
COMMD9-202ENST00000355500 UNC13BO14795 1591 aa11.39□□□□□ -0.59
COMMD9-202ENST00000355500 TONSLQ96HA7 1378 aa11.39□□□□□ -0.59
COMMD9-202ENST00000355500 HSP90B1P14625 803 aaKnown RBP11.39□□□□□ -0.59
COMMD9-202ENST00000355500 RAPGEF3O95398 923 aa11.38□□□□□ -0.59
COMMD9-202ENST00000355500 PZPP20742 1482 aa11.38□□□□□ -0.59
COMMD9-202ENST00000355500 PLA2R1Q13018 1463 aa11.38□□□□□ -0.59
COMMD9-202ENST00000355500 CCDC141Q6ZP82 1450 aa11.38□□□□□ -0.59
COMMD9-202ENST00000355500 MBD5Q9P267 1494 aa11.38□□□□□ -0.59
COMMD9-202ENST00000355500 ILDR1Q86SU0 546 aaPredicted RBP11.38□□□□□ -0.59
COMMD9-202ENST00000355500 AAMPQ13685 434 aa11.37□□□□□ -0.59
COMMD9-202ENST00000355500 VSIG10Q8N0Z9 540 aa11.37□□□□□ -0.59
COMMD9-202ENST00000355500 DMRT2Q9Y5R5 561 aa11.37□□□□□ -0.59
COMMD9-202ENST00000355500 ANKRD30BQ9BXX2 1392 aa11.36□□□□□ -0.59
COMMD9-202ENST00000355500 CFDP1Q9UEE9 299 aaPredicted RBP11.36□□□□□ -0.59
COMMD9-202ENST00000355500 ZC3H13Q5T200 1668 aaKnown RBP11.36□□□□□ -0.59
COMMD9-202ENST00000355500 ARID3CA6NKF2 412 aa11.36□□□□□ -0.59
COMMD9-202ENST00000355500 ATP7AQ04656 1500 aa11.35□□□□□ -0.59
COMMD9-202ENST00000355500 TRAPPC8Q9Y2L5 1435 aa11.35□□□□□ -0.59
COMMD9-202ENST00000355500 EIF2AK4Q9P2K8 1649 aaKnown RBP11.35□□□□□ -0.59
COMMD9-202ENST00000355500 UHRF1BP1Q6BDS2 1440 aa11.35□□□□□ -0.59
COMMD9-202ENST00000355500 SALL2Q9Y467 1007 aaPredicted RBP11.34□□□□□ -0.59
COMMD9-202ENST00000355500 POLR3GLQ9BT43 218 aa11.33□□□□□ -0.6
COMMD9-202ENST00000355500 MPHOSPH9Q99550 1183 aa11.32□□□□□ -0.6
COMMD9-202ENST00000355500 IQGAP3Q86VI3 1631 aa11.32□□□□□ -0.6
COMMD9-202ENST00000355500 ANKRD50Q9ULJ7 1429 aa11.32□□□□□ -0.6
COMMD9-202ENST00000355500 RNF17Q9BXT8 1623 aaKnown RBP11.31□□□□□ -0.6
COMMD9-202ENST00000355500 MYO3AQ8NEV4 1616 aa11.31□□□□□ -0.6
COMMD9-202ENST00000355500 SIN3AQ96ST3 1273 aa11.31□□□□□ -0.6
COMMD9-202ENST00000355500 DUOX2Q9NRD8 1548 aa11.3□□□□□ -0.6
COMMD9-202ENST00000355500 KDM5AP29375 1690 aaKnown RBP11.3□□□□□ -0.6
COMMD9-202ENST00000355500 LTBP4Q8N2S1 1624 aa11.3□□□□□ -0.6
COMMD9-202ENST00000355500 RRP7BPQ9NSQ0 103 aa11.29□□□□□ -0.6
COMMD9-202ENST00000355500 DEPDC5O75140 1603 aa11.29□□□□□ -0.6
COMMD9-202ENST00000355500 ERBINQ96RT1 1412 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms