RNA–Protein interactions for RNA: ENST00000355135.6

GPM6B-202, Transcript of glycoprotein M6B, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene GPM6B, Length 1,673 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPM6B-202ENST00000355135 RAB3GAP2Q9H2M9 1393 aa20.5■□□□□ 0.87
GPM6B-202ENST00000355135 CEBPAP49715 358 aaPredicted RBP20.5■□□□□ 0.87
GPM6B-202ENST00000355135 KIF3BO15066 747 aa20.48■□□□□ 0.87
GPM6B-202ENST00000355135 CLTCQ00610 1675 aaKnown RBP20.48■□□□□ 0.87
GPM6B-202ENST00000355135 SETD1BQ9UPS6 1966 aaKnown RBP20.47■□□□□ 0.87
GPM6B-202ENST00000355135 LMTK3Q96Q04 1460 aa20.47■□□□□ 0.87
GPM6B-202ENST00000355135 DUOX2Q9NRD8 1548 aa20.46■□□□□ 0.87
GPM6B-202ENST00000355135 PTPRKQ15262 1439 aa20.46■□□□□ 0.87
GPM6B-202ENST00000355135 EIF2AK4Q9P2K8 1649 aaKnown RBP20.46■□□□□ 0.87
GPM6B-202ENST00000355135 CLSPNQ9HAW4 1339 aa20.44■□□□□ 0.86
GPM6B-202ENST00000355135 PREX1Q8TCU6 1659 aa20.44■□□□□ 0.86
GPM6B-202ENST00000355135 FAM135AQ9P2D6 1515 aa20.44■□□□□ 0.86
GPM6B-202ENST00000355135 ZMYM3Q14202 1370 aa20.44■□□□□ 0.86
GPM6B-202ENST00000355135 KIF15Q9NS87 1388 aa20.44■□□□□ 0.86
GPM6B-202ENST00000355135 RNF17Q9BXT8 1623 aaKnown RBP20.43■□□□□ 0.86
GPM6B-202ENST00000355135 ANKRD30AQ9BXX3 1397 aa20.42■□□□□ 0.86
GPM6B-202ENST00000355135 RRP7BPQ9NSQ0 103 aa20.41■□□□□ 0.86
GPM6B-202ENST00000355135 HFM1A2PYH4 1435 aa20.4■□□□□ 0.86
GPM6B-202ENST00000355135 KDM5DQ9BY66 1539 aa20.4■□□□□ 0.86
GPM6B-202ENST00000355135 CHIC2Q9UKJ5 165 aa20.4■□□□□ 0.86
GPM6B-202ENST00000355135 NPATQ14207 1427 aa20.4■□□□□ 0.86
GPM6B-202ENST00000355135 ERBINQ96RT1 1412 aa20.4■□□□□ 0.86
GPM6B-202ENST00000355135 ADGRL2O95490 1459 aa20.4■□□□□ 0.86
GPM6B-202ENST00000355135 NCOA1Q15788 1441 aa20.39■□□□□ 0.85
GPM6B-202ENST00000355135 UHRF1BP1Q6BDS2 1440 aa20.37■□□□□ 0.85
GPM6B-202ENST00000355135 WASHC2CQ9Y4E1 1318 aa20.37■□□□□ 0.85
GPM6B-202ENST00000355135 GCC2Q8IWJ2 1684 aa20.36■□□□□ 0.85
GPM6B-202ENST00000355135 MROH1Q8NDA8 1641 aa20.35■□□□□ 0.85
GPM6B-202ENST00000355135 ZC3H13Q5T200 1668 aaKnown RBP20.35■□□□□ 0.85
GPM6B-202ENST00000355135 NAIPQ13075 1403 aa20.34■□□□□ 0.85
GPM6B-202ENST00000355135 HSPA2P54652 639 aa20.34■□□□□ 0.85
GPM6B-202ENST00000355135 ABCC3O15438 1527 aa20.32■□□□□ 0.84
GPM6B-202ENST00000355135 PRDM15P57071 1507 aaPredicted RBP20.31■□□□□ 0.84
GPM6B-202ENST00000355135 DEPDC5O75140 1603 aa20.31■□□□□ 0.84
GPM6B-202ENST00000355135 PZPP20742 1482 aa20.31■□□□□ 0.84
GPM6B-202ENST00000355135 ROCK1Q13464 1354 aa20.29■□□□□ 0.84
GPM6B-202ENST00000355135 CEP152O94986 1710 aa20.29■□□□□ 0.84
GPM6B-202ENST00000355135 MYO3AQ8NEV4 1616 aa20.28■□□□□ 0.84
GPM6B-202ENST00000355135 ANKRD50Q9ULJ7 1429 aa20.27■□□□□ 0.84
GPM6B-202ENST00000355135 CAMSAP1Q5T5Y3 1602 aa20.26■□□□□ 0.83
GPM6B-202ENST00000355135 ZNF142P52746 1687 aaPredicted RBP20.26■□□□□ 0.83
GPM6B-202ENST00000355135 KANK1Q14678 1352 aa20.25■□□□□ 0.83
GPM6B-202ENST00000355135 FBXO31Q5XUX0 539 aaPredicted RBP20.25■□□□□ 0.83
GPM6B-202ENST00000355135 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.24■□□□□ 0.83
GPM6B-202ENST00000355135 TNRQ92752 1358 aa20.24■□□□□ 0.83
GPM6B-202ENST00000355135 CEP170BQ9Y4F5 1589 aaPredicted RBP20.23■□□□□ 0.83
GPM6B-202ENST00000355135 VWDEQ8N2E2 1590 aa20.22■□□□□ 0.83
GPM6B-202ENST00000355135 STRCQ7RTU9 1775 aa20.21■□□□□ 0.83
GPM6B-202ENST00000355135 ARHGAP31Q2M1Z3 1444 aa20.21■□□□□ 0.83
GPM6B-202ENST00000355135 LMTK2Q8IWU2 1503 aa20.21■□□□□ 0.83
GPM6B-202ENST00000355135 A2ML1A8K2U0 1454 aa20.2■□□□□ 0.82
GPM6B-202ENST00000355135 SPATA31D1Q6ZQQ2 1576 aa20.2■□□□□ 0.82
GPM6B-202ENST00000355135 ERVK-7P63135 1459 aa20.19■□□□□ 0.82
GPM6B-202ENST00000355135 CFAP65Q6ZU64 1925 aaKnown RBP20.19■□□□□ 0.82
GPM6B-202ENST00000355135 NLRP1Q9C000 1473 aa20.17■□□□□ 0.82
GPM6B-202ENST00000355135 UNC13BO14795 1591 aa20.17■□□□□ 0.82
GPM6B-202ENST00000355135 DMRT2Q9Y5R5 561 aa20.16■□□□□ 0.82
GPM6B-202ENST00000355135 PLA2R1Q13018 1463 aa20.14■□□□□ 0.81
GPM6B-202ENST00000355135 EFCAB6Q5THR3 1501 aa20.14■□□□□ 0.81
GPM6B-202ENST00000355135 TET3O43151 1660 aa20.11■□□□□ 0.81
GPM6B-202ENST00000355135 PTPRTO14522 1441 aa20.11■□□□□ 0.81
GPM6B-202ENST00000355135 UGGT1Q9NYU2 1555 aa20.1■□□□□ 0.81
GPM6B-202ENST00000355135 ACIN1Q9UKV3 1341 aaKnown RBP20.09■□□□□ 0.81
GPM6B-202ENST00000355135 PKD2Q13563 968 aa20.09■□□□□ 0.81
GPM6B-202ENST00000355135 IQGAP3Q86VI3 1631 aa20.09■□□□□ 0.81
GPM6B-202ENST00000355135 RPRD2Q5VT52 1461 aaKnown RBP20.08■□□□□ 0.81
GPM6B-202ENST00000355135 THEMISQ8N1K5 641 aaPredicted RBP20.08■□□□□ 0.81
GPM6B-202ENST00000355135 NCKAP5LQ9HCH0 1330 aa20.06■□□□□ 0.8
GPM6B-202ENST00000355135 NUP155O75694 1391 aa20.05■□□□□ 0.8
GPM6B-202ENST00000355135 NOS1P29475 1434 aa20.05■□□□□ 0.8
GPM6B-202ENST00000355135 SIN3AQ96ST3 1273 aa20.05■□□□□ 0.8
GPM6B-202ENST00000355135 POLR1AO95602 1720 aaPredicted RBP20.05■□□□□ 0.8
GPM6B-202ENST00000355135 TRIM52Q96A61 297 aa20.04■□□□□ 0.8
GPM6B-202ENST00000355135 UBR1Q8IWV7 1749 aa20.04■□□□□ 0.8
GPM6B-202ENST00000355135 ZNF316A6NFI3 1004 aaPredicted RBP20.03■□□□□ 0.8
GPM6B-202ENST00000355135 SYNMO15061 1565 aa20.03■□□□□ 0.8
GPM6B-202ENST00000355135 E9PCH4 1651 aa20.02■□□□□ 0.8
GPM6B-202ENST00000355135 PIK3C2BO00750 1634 aa20.01■□□□□ 0.79
GPM6B-202ENST00000355135 NEUROD1Q13562 356 aa20■□□□□ 0.79
GPM6B-202ENST00000355135 ANKLE2Q86XL3 938 aa20■□□□□ 0.79
GPM6B-202ENST00000355135 TIMELESSQ9UNS1 1208 aa20■□□□□ 0.79
GPM6B-202ENST00000355135 KDM5AP29375 1690 aaKnown RBP20■□□□□ 0.79
GPM6B-202ENST00000355135 NEURL4Q96JN8 1562 aa19.99■□□□□ 0.79
GPM6B-202ENST00000355135 IDI1Q13907 227 aa19.99■□□□□ 0.79
GPM6B-202ENST00000355135 SLC52A1Q9NWF4 448 aa19.99■□□□□ 0.79
GPM6B-202ENST00000355135 MPHOSPH9Q99550 1183 aa19.98■□□□□ 0.79
GPM6B-202ENST00000355135 SLIT1O75093 1534 aa19.96■□□□□ 0.79
GPM6B-202ENST00000355135 MED14O60244 1454 aa19.96■□□□□ 0.79
GPM6B-202ENST00000355135 STAG3Q9UJ98 1225 aa19.95■□□□□ 0.78
GPM6B-202ENST00000355135 ARHGAP23Q9P227 1491 aa19.95■□□□□ 0.78
GPM6B-202ENST00000355135 ADGRB3O60242 1522 aa19.94■□□□□ 0.78
GPM6B-202ENST00000355135 NPHP4O75161 1426 aaPredicted RBP19.93■□□□□ 0.78
GPM6B-202ENST00000355135 CERKQ8TCT0 537 aa19.92■□□□□ 0.78
GPM6B-202ENST00000355135 TONSLQ96HA7 1378 aa19.92■□□□□ 0.78
GPM6B-202ENST00000355135 SCAF11Q99590 1463 aaKnown RBP19.92■□□□□ 0.78
GPM6B-202ENST00000355135 IQGAP1P46940 1657 aa19.91■□□□□ 0.78
GPM6B-202ENST00000355135 LTBP4Q8N2S1 1624 aa19.91■□□□□ 0.78
GPM6B-202ENST00000355135 TMEM2Q9UHN6 1383 aa19.91■□□□□ 0.78
GPM6B-202ENST00000355135 SPHKAPQ2M3C7 1700 aa19.9■□□□□ 0.78
GPM6B-202ENST00000355135 TXNDC2Q86VQ3 553 aa19.89■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms