RNA–Protein interactions for RNA: ENST00000354473.4

VPS72-201, Transcript of vacuolar protein sorting 72 homolog, humanhuman

TSL 3

Gene VPS72, Length 1,347 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS72-201ENST00000354473 CHIC2Q9UKJ5 165 aa28.94■■■□□ 2.22
VPS72-201ENST00000354473 ZMYM3Q14202 1370 aa28.93■■■□□ 2.22
VPS72-201ENST00000354473 ANKRD30AQ9BXX3 1397 aa28.93■■■□□ 2.22
VPS72-201ENST00000354473 KDM5DQ9BY66 1539 aa28.91■■■□□ 2.22
VPS72-201ENST00000354473 FAM135AQ9P2D6 1515 aa28.91■■■□□ 2.22
VPS72-201ENST00000354473 ADGRL2O95490 1459 aa28.9■■■□□ 2.22
VPS72-201ENST00000354473 ERBINQ96RT1 1412 aa28.89■■■□□ 2.22
VPS72-201ENST00000354473 SETD1BQ9UPS6 1966 aaKnown RBP28.89■■■□□ 2.22
VPS72-201ENST00000354473 NCOA1Q15788 1441 aa28.89■■■□□ 2.21
VPS72-201ENST00000354473 MROH1Q8NDA8 1641 aa28.86■■■□□ 2.21
VPS72-201ENST00000354473 NPATQ14207 1427 aa28.85■■■□□ 2.21
VPS72-201ENST00000354473 WASHC2CQ9Y4E1 1318 aa28.84■■■□□ 2.21
VPS72-201ENST00000354473 UHRF1BP1Q6BDS2 1440 aa28.84■■■□□ 2.21
VPS72-201ENST00000354473 PTPRKQ15262 1439 aa28.83■■■□□ 2.21
VPS72-201ENST00000354473 ZC3H13Q5T200 1668 aaKnown RBP28.82■■■□□ 2.2
VPS72-201ENST00000354473 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP28.82■■■□□ 2.2
VPS72-201ENST00000354473 HSPA2P54652 639 aa28.82■■■□□ 2.2
VPS72-201ENST00000354473 ABCC3O15438 1527 aa28.81■■■□□ 2.2
VPS72-201ENST00000354473 PRDM15P57071 1507 aaPredicted RBP28.79■■■□□ 2.2
VPS72-201ENST00000354473 RRBP1Q9P2E9 1410 aaKnown RBP28.79■■■□□ 2.2
VPS72-201ENST00000354473 CEP152O94986 1710 aa28.78■■■□□ 2.2
VPS72-201ENST00000354473 DEPDC5O75140 1603 aa28.78■■■□□ 2.2
VPS72-201ENST00000354473 ITGAEP38570 1179 aa28.77■■■□□ 2.2
VPS72-201ENST00000354473 PZPP20742 1482 aa28.76■■■□□ 2.2
VPS72-201ENST00000354473 MYO3AQ8NEV4 1616 aa28.75■■■□□ 2.19
VPS72-201ENST00000354473 ROCK1Q13464 1354 aa28.73■■■□□ 2.19
VPS72-201ENST00000354473 CAMSAP1Q5T5Y3 1602 aa28.73■■■□□ 2.19
VPS72-201ENST00000354473 ANKRD50Q9ULJ7 1429 aa28.72■■■□□ 2.19
VPS72-201ENST00000354473 GRWD1Q9BQ67 446 aaKnown RBP eCLIP28.7■■■□□ 2.196e-7■■■■□ 25.4
VPS72-201ENST00000354473 FBXO31Q5XUX0 539 aaPredicted RBP28.69■■■□□ 2.18
VPS72-201ENST00000354473 ZNF142P52746 1687 aaPredicted RBP28.69■■■□□ 2.18
VPS72-201ENST00000354473 KANK1Q14678 1352 aa28.68■■■□□ 2.18
VPS72-201ENST00000354473 CEP170BQ9Y4F5 1589 aaPredicted RBP28.67■■■□□ 2.18
VPS72-201ENST00000354473 TNRQ92752 1358 aa28.66■■■□□ 2.18
VPS72-201ENST00000354473 VWDEQ8N2E2 1590 aa28.65■■■□□ 2.18
VPS72-201ENST00000354473 SPATA31D1Q6ZQQ2 1576 aa28.61■■■□□ 2.17
VPS72-201ENST00000354473 STRCQ7RTU9 1775 aa28.61■■■□□ 2.17
VPS72-201ENST00000354473 ERVK-7P63135 1459 aa28.61■■■□□ 2.17
VPS72-201ENST00000354473 CFAP65Q6ZU64 1925 aaKnown RBP28.6■■■□□ 2.17
VPS72-201ENST00000354473 LMTK2Q8IWU2 1503 aa28.6■■■□□ 2.17
VPS72-201ENST00000354473 A2ML1A8K2U0 1454 aa28.6■■■□□ 2.17
VPS72-201ENST00000354473 UNC13BO14795 1591 aa28.59■■■□□ 2.17
VPS72-201ENST00000354473 ARHGAP31Q2M1Z3 1444 aa28.58■■■□□ 2.17
VPS72-201ENST00000354473 NLRP1Q9C000 1473 aa28.55■■■□□ 2.16
VPS72-201ENST00000354473 EFCAB6Q5THR3 1501 aa28.54■■■□□ 2.16
VPS72-201ENST00000354473 GCC2Q8IWJ2 1684 aa28.51■■■□□ 2.15
VPS72-201ENST00000354473 TET3O43151 1660 aa28.5■■■□□ 2.15
VPS72-201ENST00000354473 PLA2R1Q13018 1463 aa28.49■■■□□ 2.15
VPS72-201ENST00000354473 UGGT1Q9NYU2 1555 aa28.47■■■□□ 2.15
VPS72-201ENST00000354473 IQGAP3Q86VI3 1631 aa28.47■■■□□ 2.15
VPS72-201ENST00000354473 NAIPQ13075 1403 aa28.46■■■□□ 2.15
VPS72-201ENST00000354473 DMRT2Q9Y5R5 561 aa28.46■■■□□ 2.15
VPS72-201ENST00000354473 HFM1A2PYH4 1435 aa28.43■■■□□ 2.14
VPS72-201ENST00000354473 NUP155O75694 1391 aa28.43■■■□□ 2.14
VPS72-201ENST00000354473 RPRD2Q5VT52 1461 aaKnown RBP28.42■■■□□ 2.14
VPS72-201ENST00000354473 NCKAP5LQ9HCH0 1330 aa28.42■■■□□ 2.14
VPS72-201ENST00000354473 PTPRTO14522 1441 aa28.41■■■□□ 2.14
VPS72-201ENST00000354473 SYNMO15061 1565 aa28.41■■■□□ 2.14
VPS72-201ENST00000354473 UBR1Q8IWV7 1749 aa28.4■■■□□ 2.14
VPS72-201ENST00000354473 PKD2Q13563 968 aa28.4■■■□□ 2.14
VPS72-201ENST00000354473 NOS1P29475 1434 aa28.39■■■□□ 2.14
VPS72-201ENST00000354473 POLR1AO95602 1720 aaPredicted RBP28.39■■■□□ 2.14
VPS72-201ENST00000354473 THEMISQ8N1K5 641 aaPredicted RBP28.39■■■□□ 2.13
VPS72-201ENST00000354473 E9PCH4 1651 aa28.38■■■□□ 2.13
VPS72-201ENST00000354473 PIK3C2BO00750 1634 aa28.37■■■□□ 2.13
VPS72-201ENST00000354473 NEURL4Q96JN8 1562 aa28.32■■■□□ 2.12
VPS72-201ENST00000354473 ANKLE2Q86XL3 938 aa28.3■■■□□ 2.12
VPS72-201ENST00000354473 KDM5AP29375 1690 aaKnown RBP28.3■■■□□ 2.12
VPS72-201ENST00000354473 IDI1Q13907 227 aa28.29■■■□□ 2.12
VPS72-201ENST00000354473 ADGRB3O60242 1522 aa28.26■■■□□ 2.11
VPS72-201ENST00000354473 SLC52A1Q9NWF4 448 aa28.26■■■□□ 2.11
VPS72-201ENST00000354473 STAG3Q9UJ98 1225 aa28.26■■■□□ 2.11
VPS72-201ENST00000354473 SLIT1O75093 1534 aa28.25■■■□□ 2.11
VPS72-201ENST00000354473 ARHGAP23Q9P227 1491 aa28.24■■■□□ 2.11
VPS72-201ENST00000354473 TRIM52Q96A61 297 aa28.23■■■□□ 2.11
VPS72-201ENST00000354473 MED14O60244 1454 aa28.22■■■□□ 2.11
VPS72-201ENST00000354473 SPHKAPQ2M3C7 1700 aa28.21■■■□□ 2.11
VPS72-201ENST00000354473 NPHP4O75161 1426 aaPredicted RBP28.21■■■□□ 2.11
VPS72-201ENST00000354473 IQGAP1P46940 1657 aa28.21■■■□□ 2.11
VPS72-201ENST00000354473 SCAF11Q99590 1463 aaKnown RBP28.21■■■□□ 2.11
VPS72-201ENST00000354473 TMEM2Q9UHN6 1383 aa28.2■■■□□ 2.1
VPS72-201ENST00000354473 MYO5BQ9ULV0 1848 aa28.19■■■□□ 2.1
VPS72-201ENST00000354473 LTBP4Q8N2S1 1624 aa28.18■■■□□ 2.1
VPS72-201ENST00000354473 TMEM131LA2VDJ0 1609 aa28.17■■■□□ 2.1
VPS72-201ENST00000354473 ZNF335Q9H4Z2 1342 aaPredicted RBP28.17■■■□□ 2.1
VPS72-201ENST00000354473 CERKQ8TCT0 537 aa28.17■■■□□ 2.1
VPS72-201ENST00000354473 LTKP29376 864 aa28.16■■■□□ 2.1
VPS72-201ENST00000354473 TXNDC2Q86VQ3 553 aa28.16■■■□□ 2.1
VPS72-201ENST00000354473 EID1Q9Y6B2 187 aa28.15■■■□□ 2.1
VPS72-201ENST00000354473 SETD5Q9C0A6 1442 aa28.14■■■□□ 2.09
VPS72-201ENST00000354473 SLC4A1APQ9BWU0 796 aaKnown RBP28.12■■■□□ 2.09
VPS72-201ENST00000354473 TRPM2O94759 1503 aa28.1■■■□□ 2.09
VPS72-201ENST00000354473 CHGAP10645 457 aaKnown RBP28.1■■■□□ 2.09
VPS72-201ENST00000354473 ILDR1Q86SU0 546 aaPredicted RBP28.08■■■□□ 2.09
VPS72-201ENST00000354473 CLTCL1P53675 1640 aa28.06■■■□□ 2.08
VPS72-201ENST00000354473 FBXO41Q8TF61 875 aa28.06■■■□□ 2.08
VPS72-201ENST00000354473 ZFYVE9O95405 1425 aa28.06■■■□□ 2.08
VPS72-201ENST00000354473 RIMS2Q9UQ26 1411 aa28.05■■■□□ 2.08
VPS72-201ENST00000354473 RAB3GAP2Q9H2M9 1393 aa28.04■■■□□ 2.08
VPS72-201ENST00000354473 ACIN1Q9UKV3 1341 aaKnown RBP28.01■■■□□ 2.07
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms