RNA–Protein interactions for RNA: ENST00000346495.6

TSPAN3-202, Transcript of tetraspanin 3, humanhuman

TSL 2 BASIC

Gene TSPAN3, Length 1,647 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-202ENST00000346495 TEX14Q8IWB6 1497 aa30.95■■■□□ 2.54
TSPAN3-202ENST00000346495 TSPOAP1O95153 1857 aa30.95■■■□□ 2.54
TSPAN3-202ENST00000346495 RICTORQ6R327 1708 aa30.95■■■□□ 2.54
TSPAN3-202ENST00000346495 DHX29Q7Z478 1369 aaKnown RBP30.94■■■□□ 2.54
TSPAN3-202ENST00000346495 PPP1R15AO75807 674 aaPredicted RBP30.94■■■□□ 2.54
TSPAN3-202ENST00000346495 DEPDC5O75140 1603 aa30.93■■■□□ 2.54
TSPAN3-202ENST00000346495 GRWD1Q9BQ67 446 aaKnown RBP eCLIP30.91■■■□□ 2.54
TSPAN3-202ENST00000346495 A2MP01023 1474 aa30.88■■■□□ 2.53
TSPAN3-202ENST00000346495 RAPGEF3O95398 923 aa30.86■■■□□ 2.53
TSPAN3-202ENST00000346495 ABCA6Q8N139 1617 aa30.85■■■□□ 2.53
TSPAN3-202ENST00000346495 FRMPD1Q5SYB0 1578 aa30.82■■■□□ 2.53
TSPAN3-202ENST00000346495 KIF3BO15066 747 aa30.8■■■□□ 2.52
TSPAN3-202ENST00000346495 PRDM15P57071 1507 aaPredicted RBP30.8■■■□□ 2.52
TSPAN3-202ENST00000346495 KANK1Q14678 1352 aa30.8■■■□□ 2.52
TSPAN3-202ENST00000346495 VWDEQ8N2E2 1590 aa30.79■■■□□ 2.52
TSPAN3-202ENST00000346495 ZMYM4Q5VZL5 1548 aa30.79■■■□□ 2.52
TSPAN3-202ENST00000346495 BCORL1Q5H9F3 1711 aa30.78■■■□□ 2.52
TSPAN3-202ENST00000346495 DIP2CQ9Y2E4 1556 aa30.78■■■□□ 2.52
TSPAN3-202ENST00000346495 RNF17Q9BXT8 1623 aaKnown RBP30.77■■■□□ 2.52
TSPAN3-202ENST00000346495 MROH1Q8NDA8 1641 aa30.77■■■□□ 2.52
TSPAN3-202ENST00000346495 L3MBTL2Q969R5 705 aa30.76■■■□□ 2.51
TSPAN3-202ENST00000346495 TET3O43151 1660 aa30.75■■■□□ 2.51
TSPAN3-202ENST00000346495 E9PCH4 1651 aa30.72■■■□□ 2.51
TSPAN3-202ENST00000346495 ATP10AO60312 1499 aa30.71■■■□□ 2.51
TSPAN3-202ENST00000346495 CCDC144AA2RUR9 1427 aa30.68■■■□□ 2.5
TSPAN3-202ENST00000346495 PLA2R1Q13018 1463 aa30.68■■■□□ 2.5
TSPAN3-202ENST00000346495 YEATS2Q9ULM3 1422 aa30.66■■■□□ 2.5
TSPAN3-202ENST00000346495 LMTK2Q8IWU2 1503 aa30.65■■■□□ 2.5
TSPAN3-202ENST00000346495 SPHKAPQ2M3C7 1700 aa30.61■■■□□ 2.49
TSPAN3-202ENST00000346495 CEP152O94986 1710 aa30.61■■■□□ 2.49
TSPAN3-202ENST00000346495 DIEXFQ68CQ4 756 aaKnown RBP30.6■■■□□ 2.49
TSPAN3-202ENST00000346495 EFCAB6Q5THR3 1501 aa30.59■■■□□ 2.49
TSPAN3-202ENST00000346495 TRPM2O94759 1503 aa30.58■■■□□ 2.49
TSPAN3-202ENST00000346495 PTPRTO14522 1441 aa30.57■■■□□ 2.48
TSPAN3-202ENST00000346495 REREQ9P2R6 1566 aa30.57■■■□□ 2.48
TSPAN3-202ENST00000346495 COL17A1Q9UMD9 1497 aaPredicted RBP30.55■■■□□ 2.48
TSPAN3-202ENST00000346495 GGT6Q6P531 493 aa30.55■■■□□ 2.48
TSPAN3-202ENST00000346495 DNAJC5Q9H3Z4 198 aa30.55■■■□□ 2.48
TSPAN3-202ENST00000346495 ABCC3O15438 1527 aa30.51■■■□□ 2.47
TSPAN3-202ENST00000346495 NBPF8Q3BBV2 869 aa30.51■■■□□ 2.47
TSPAN3-202ENST00000346495 ZC3H13Q5T200 1668 aaKnown RBP30.5■■■□□ 2.47
TSPAN3-202ENST00000346495 UHRF1BP1Q6BDS2 1440 aa30.5■■■□□ 2.47
TSPAN3-202ENST00000346495 ARHGEF40Q8TER5 1519 aa30.48■■■□□ 2.47
TSPAN3-202ENST00000346495 AGLP35573 1532 aa30.48■■■□□ 2.47
TSPAN3-202ENST00000346495 WASHC2CQ9Y4E1 1318 aa30.46■■■□□ 2.47
TSPAN3-202ENST00000346495 CLTCL1P53675 1640 aa30.46■■■□□ 2.47
TSPAN3-202ENST00000346495 CAMSAP1Q5T5Y3 1602 aa30.46■■■□□ 2.47
TSPAN3-202ENST00000346495 DCAF11Q8TEB1 546 aa30.42■■■□□ 2.46
TSPAN3-202ENST00000346495 NPATQ14207 1427 aa30.4■■■□□ 2.46
TSPAN3-202ENST00000346495 SPATA31E1Q6ZUB1 1445 aa30.4■■■□□ 2.46
TSPAN3-202ENST00000346495 NEURL4Q96JN8 1562 aa30.39■■■□□ 2.46
TSPAN3-202ENST00000346495 TRHP20396 242 aaPredicted RBP30.39■■■□□ 2.46
TSPAN3-202ENST00000346495 RGL3Q3MIN7 710 aa30.38■■■□□ 2.45
TSPAN3-202ENST00000346495 EIF4G2P78344 907 aaKnown RBP eCLIP30.37■■■□□ 2.45
TSPAN3-202ENST00000346495 KDM2AQ9Y2K7 1162 aa30.37■■■□□ 2.45
TSPAN3-202ENST00000346495 RALGAPBQ86X10 1494 aa30.37■■■□□ 2.45
TSPAN3-202ENST00000346495 ZNF326Q5BKZ1 582 aaKnown RBP30.36■■■□□ 2.45
TSPAN3-202ENST00000346495 ARHGAP31Q2M1Z3 1444 aa30.36■■■□□ 2.45
TSPAN3-202ENST00000346495 KIF1BO60333 1816 aa30.35■■■□□ 2.45
TSPAN3-202ENST00000346495 CNTLNQ9NXG0 1405 aa30.34■■■□□ 2.45
TSPAN3-202ENST00000346495 PPP6R1Q9UPN7 881 aa30.34■■■□□ 2.45
TSPAN3-202ENST00000346495 SIGLEC1Q9BZZ2 1709 aa30.33■■■□□ 2.45
TSPAN3-202ENST00000346495 HSPA5P11021 654 aaKnown RBP30.33■■■□□ 2.45
TSPAN3-202ENST00000346495 HIRIP3Q9BW71 556 aaPredicted RBP30.33■■■□□ 2.45
TSPAN3-202ENST00000346495 PRAG1Q86YV5 1406 aa30.32■■■□□ 2.44
TSPAN3-202ENST00000346495 CFAP65Q6ZU64 1925 aaKnown RBP30.31■■■□□ 2.44
TSPAN3-202ENST00000346495 UGGT1Q9NYU2 1555 aa30.3■■■□□ 2.44
TSPAN3-202ENST00000346495 NOS1P29475 1434 aa30.29■■■□□ 2.44
TSPAN3-202ENST00000346495 TRPM1Q7Z4N2 1603 aa30.28■■■□□ 2.44
TSPAN3-202ENST00000346495 STAC3Q96MF2 364 aa30.28■■■□□ 2.44
TSPAN3-202ENST00000346495 ADGRB3O60242 1522 aa30.21■■■□□ 2.43
TSPAN3-202ENST00000346495 PIK3C2BO00750 1634 aa30.21■■■□□ 2.43
TSPAN3-202ENST00000346495 MROH2AA6NES4 1674 aa30.21■■■□□ 2.43
TSPAN3-202ENST00000346495 CLTCQ00610 1675 aaKnown RBP30.21■■■□□ 2.43
TSPAN3-202ENST00000346495 PREX1Q8TCU6 1659 aa30.21■■■□□ 2.43
TSPAN3-202ENST00000346495 SYNMO15061 1565 aa30.21■■■□□ 2.43
TSPAN3-202ENST00000346495 MADDQ8WXG6 1647 aa30.19■■■□□ 2.42
TSPAN3-202ENST00000346495 ROCK2O75116 1388 aaKnown RBP30.19■■■□□ 2.42
TSPAN3-202ENST00000346495 USP47Q96K76 1375 aa30.19■■■□□ 2.42
TSPAN3-202ENST00000346495 CARD11Q9BXL7 1154 aa30.18■■■□□ 2.42
TSPAN3-202ENST00000346495 IFT172Q9UG01 1749 aa30.18■■■□□ 2.42
TSPAN3-202ENST00000346495 LAMC1P11047 1609 aa30.18■■■□□ 2.42
TSPAN3-202ENST00000346495 GPRASP1Q5JY77 1395 aa30.14■■■□□ 2.42
TSPAN3-202ENST00000346495 MYOM2P54296 1465 aa30.14■■■□□ 2.42
TSPAN3-202ENST00000346495 POLR1AO95602 1720 aaPredicted RBP30.13■■■□□ 2.41
TSPAN3-202ENST00000346495 MLECQ14165 292 aa30.13■■■□□ 2.41
TSPAN3-202ENST00000346495 DDX10Q13206 875 aaKnown RBP30.12■■■□□ 2.41
TSPAN3-202ENST00000346495 SLC52A1Q9NWF4 448 aa30.11■■■□□ 2.41
TSPAN3-202ENST00000346495 ERVK-7P63135 1459 aa30.11■■■□□ 2.41
TSPAN3-202ENST00000346495 CHGAP10645 457 aaKnown RBP30.09■■■□□ 2.41
TSPAN3-202ENST00000346495 MIER1Q8N108 512 aa30.09■■■□□ 2.41
TSPAN3-202ENST00000346495 ARID4BQ4LE39 1312 aaPredicted RBP30.09■■■□□ 2.41
TSPAN3-202ENST00000346495 KIAA1210Q9ULL0 1709 aa30.09■■■□□ 2.41
TSPAN3-202ENST00000346495 ESF1Q9H501 851 aaKnown RBP30.07■■■□□ 2.4
TSPAN3-202ENST00000346495 PPLO60437 1756 aa30.07■■■□□ 2.4
TSPAN3-202ENST00000346495 WASHC2AQ641Q2 1341 aa30.06■■■□□ 2.4
TSPAN3-202ENST00000346495 RPGRIP1LQ68CZ1 1315 aa30.06■■■□□ 2.4
TSPAN3-202ENST00000346495 NBPF1Q3BBV0 1214 aa30.06■■■□□ 2.4
TSPAN3-202ENST00000346495 SPATA31D1Q6ZQQ2 1576 aa30.04■■■□□ 2.4
TSPAN3-202ENST00000346495 IDI1Q13907 227 aa30.03■■■□□ 2.4
Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms