RNA–Protein interactions for RNA: ENST00000345519.9

CLTA-202, Transcript of clathrin light chain A, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CLTA, Length 1,073 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTA-202ENST00000345519 PRDM15P57071 1507 aaPredicted RBP30.82■■■□□ 2.52
CLTA-202ENST00000345519 ERBINQ96RT1 1412 aa30.81■■■□□ 2.52
CLTA-202ENST00000345519 ZMYM3Q14202 1370 aa30.8■■■□□ 2.52
CLTA-202ENST00000345519 MYO3AQ8NEV4 1616 aa30.8■■■□□ 2.52
CLTA-202ENST00000345519 CEBPAP49715 358 aaPredicted RBP30.79■■■□□ 2.52
CLTA-202ENST00000345519 CEP152O94986 1710 aa30.78■■■□□ 2.52
CLTA-202ENST00000345519 ESF1Q9H501 851 aaKnown RBP30.77■■■□□ 2.52
CLTA-202ENST00000345519 KIF15Q9NS87 1388 aa30.77■■■□□ 2.52
CLTA-202ENST00000345519 PTPRKQ15262 1439 aa30.76■■■□□ 2.51
CLTA-202ENST00000345519 UHRF1BP1Q6BDS2 1440 aa30.75■■■□□ 2.51
CLTA-202ENST00000345519 STRCQ7RTU9 1775 aa30.75■■■□□ 2.51
CLTA-202ENST00000345519 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP30.75■■■□□ 2.51
CLTA-202ENST00000345519 NCOA1Q15788 1441 aa30.74■■■□□ 2.51
CLTA-202ENST00000345519 ABCC3O15438 1527 aa30.74■■■□□ 2.51
CLTA-202ENST00000345519 KIF3BO15066 747 aa30.74■■■□□ 2.51
CLTA-202ENST00000345519 GGT6Q6P531 493 aa30.74■■■□□ 2.51
CLTA-202ENST00000345519 PZPP20742 1482 aa30.73■■■□□ 2.51
CLTA-202ENST00000345519 CAMSAP1Q5T5Y3 1602 aa30.73■■■□□ 2.51
CLTA-202ENST00000345519 ANKRD30AQ9BXX3 1397 aa30.69■■■□□ 2.5
CLTA-202ENST00000345519 VWDEQ8N2E2 1590 aa30.69■■■□□ 2.5
CLTA-202ENST00000345519 CEP170BQ9Y4F5 1589 aaPredicted RBP30.66■■■□□ 2.5
CLTA-202ENST00000345519 PLPPR3Q6T4P5 718 aa30.66■■■□□ 2.5
CLTA-202ENST00000345519 RRBP1Q9P2E9 1410 aaKnown RBP30.65■■■□□ 2.5
CLTA-202ENST00000345519 SPATA31D1Q6ZQQ2 1576 aa30.63■■■□□ 2.49
CLTA-202ENST00000345519 LMTK2Q8IWU2 1503 aa30.61■■■□□ 2.49
CLTA-202ENST00000345519 ROCK1Q13464 1354 aa30.6■■■□□ 2.49
CLTA-202ENST00000345519 FAM50AQ14320 339 aaKnown RBP30.59■■■□□ 2.49
CLTA-202ENST00000345519 UNC13BO14795 1591 aa30.58■■■□□ 2.49
CLTA-202ENST00000345519 RRP7BPQ9NSQ0 103 aa30.58■■■□□ 2.49
CLTA-202ENST00000345519 WASHC2CQ9Y4E1 1318 aa30.57■■■□□ 2.48
CLTA-202ENST00000345519 HSPA2P54652 639 aa30.57■■■□□ 2.48
CLTA-202ENST00000345519 ARHGAP31Q2M1Z3 1444 aa30.56■■■□□ 2.48
CLTA-202ENST00000345519 CFAP65Q6ZU64 1925 aaKnown RBP30.54■■■□□ 2.48
CLTA-202ENST00000345519 A2ML1A8K2U0 1454 aa30.54■■■□□ 2.48
CLTA-202ENST00000345519 PLA2R1Q13018 1463 aa30.52■■■□□ 2.48
CLTA-202ENST00000345519 CHIC2Q9UKJ5 165 aa30.52■■■□□ 2.48
CLTA-202ENST00000345519 ANKRD50Q9ULJ7 1429 aa30.52■■■□□ 2.48
CLTA-202ENST00000345519 ERVK-7P63135 1459 aa30.51■■■□□ 2.48
CLTA-202ENST00000345519 NLRP1Q9C000 1473 aa30.5■■■□□ 2.47
CLTA-202ENST00000345519 POLR1AO95602 1720 aaPredicted RBP30.5■■■□□ 2.47
CLTA-202ENST00000345519 GCC2Q8IWJ2 1684 aa30.5■■■□□ 2.47
CLTA-202ENST00000345519 EFCAB6Q5THR3 1501 aa30.5■■■□□ 2.47
CLTA-202ENST00000345519 PPARGC1BQ86YN6 1023 aaKnown RBP30.48■■■□□ 2.47
CLTA-202ENST00000345519 TNRQ92752 1358 aa30.48■■■□□ 2.47
CLTA-202ENST00000345519 TET3O43151 1660 aa30.48■■■□□ 2.47
CLTA-202ENST00000345519 KDM5AP29375 1690 aaKnown RBP30.46■■■□□ 2.47
CLTA-202ENST00000345519 IQGAP3Q86VI3 1631 aa30.45■■■□□ 2.47
CLTA-202ENST00000345519 UBR1Q8IWV7 1749 aa30.44■■■□□ 2.46
CLTA-202ENST00000345519 PTPRTO14522 1441 aa30.42■■■□□ 2.46
CLTA-202ENST00000345519 FBXO31Q5XUX0 539 aaPredicted RBP30.42■■■□□ 2.46
CLTA-202ENST00000345519 KANK1Q14678 1352 aa30.41■■■□□ 2.46
CLTA-202ENST00000345519 UGGT1Q9NYU2 1555 aa30.38■■■□□ 2.45
CLTA-202ENST00000345519 RPRD2Q5VT52 1461 aaKnown RBP30.38■■■□□ 2.45
CLTA-202ENST00000345519 SYNMO15061 1565 aa30.37■■■□□ 2.45
CLTA-202ENST00000345519 NEURL4Q96JN8 1562 aa30.37■■■□□ 2.45
CLTA-202ENST00000345519 E9PCH4 1651 aa30.36■■■□□ 2.45
CLTA-202ENST00000345519 PIK3C2BO00750 1634 aa30.33■■■□□ 2.45
CLTA-202ENST00000345519 NOS1P29475 1434 aa30.31■■■□□ 2.44
CLTA-202ENST00000345519 DMRT2Q9Y5R5 561 aa30.31■■■□□ 2.44
CLTA-202ENST00000345519 NAIPQ13075 1403 aa30.26■■■□□ 2.43
CLTA-202ENST00000345519 GRWD1Q9BQ67 446 aaKnown RBP eCLIP30.26■■■□□ 2.434e-7■■■□□ 15.1
CLTA-202ENST00000345519 PKD2Q13563 968 aa30.25■■■□□ 2.43
CLTA-202ENST00000345519 HFM1A2PYH4 1435 aa30.24■■■□□ 2.43
CLTA-202ENST00000345519 SLIT1O75093 1534 aa30.24■■■□□ 2.43
CLTA-202ENST00000345519 MED14O60244 1454 aa30.24■■■□□ 2.43
CLTA-202ENST00000345519 LTBP4Q8N2S1 1624 aa30.23■■■□□ 2.43
CLTA-202ENST00000345519 ARHGAP23Q9P227 1491 aa30.23■■■□□ 2.43
CLTA-202ENST00000345519 IQGAP1P46940 1657 aa30.22■■■□□ 2.43
CLTA-202ENST00000345519 MYO5BQ9ULV0 1848 aa30.21■■■□□ 2.43
CLTA-202ENST00000345519 ADGRB3O60242 1522 aa30.19■■■□□ 2.42
CLTA-202ENST00000345519 ITGAEP38570 1179 aa30.19■■■□□ 2.42
CLTA-202ENST00000345519 SPHKAPQ2M3C7 1700 aa30.19■■■□□ 2.42
CLTA-202ENST00000345519 THEMISQ8N1K5 641 aaPredicted RBP30.17■■■□□ 2.42
CLTA-202ENST00000345519 NCKAP5LQ9HCH0 1330 aa30.16■■■□□ 2.42
CLTA-202ENST00000345519 TMEM131LA2VDJ0 1609 aa30.13■■■□□ 2.41
CLTA-202ENST00000345519 NUP155O75694 1391 aa30.1■■■□□ 2.41
CLTA-202ENST00000345519 IQSEC2Q5JU85 1478 aa30.1■■■□□ 2.41
CLTA-202ENST00000345519 SCAF11Q99590 1463 aaKnown RBP30.07■■■□□ 2.4
CLTA-202ENST00000345519 NPHP4O75161 1426 aaPredicted RBP30.05■■■□□ 2.4
CLTA-202ENST00000345519 ANKLE2Q86XL3 938 aa30.05■■■□□ 2.4
CLTA-202ENST00000345519 SLC52A1Q9NWF4 448 aa30.05■■■□□ 2.4
CLTA-202ENST00000345519 IDI1Q13907 227 aa30.04■■■□□ 2.4
CLTA-202ENST00000345519 TMEM2Q9UHN6 1383 aa30.03■■■□□ 2.4
CLTA-202ENST00000345519 STRCP1A6NGW2 1772 aa30.03■■■□□ 2.4
CLTA-202ENST00000345519 CERKQ8TCT0 537 aa30.01■■■□□ 2.39
CLTA-202ENST00000345519 TRPM2O94759 1503 aa30■■■□□ 2.39
CLTA-202ENST00000345519 ZFYVE9O95405 1425 aa29.97■■■□□ 2.39
CLTA-202ENST00000345519 ILDR1Q86SU0 546 aaPredicted RBP29.97■■■□□ 2.39
CLTA-202ENST00000345519 FBXO41Q8TF61 875 aa29.97■■■□□ 2.39
CLTA-202ENST00000345519 CPS1P31327 1500 aa29.96■■■□□ 2.39
CLTA-202ENST00000345519 CLTCL1P53675 1640 aa29.95■■■□□ 2.38
CLTA-202ENST00000345519 KIF1BO60333 1816 aa29.94■■■□□ 2.38
CLTA-202ENST00000345519 ZNF335Q9H4Z2 1342 aaPredicted RBP29.94■■■□□ 2.38
CLTA-202ENST00000345519 LTKP29376 864 aa29.92■■■□□ 2.38
CLTA-202ENST00000345519 XIRP1Q702N8 1843 aaKnown RBP29.87■■■□□ 2.37
CLTA-202ENST00000345519 TXNDC2Q86VQ3 553 aa29.84■■■□□ 2.37
CLTA-202ENST00000345519 NWD1Q149M9 1564 aa29.84■■■□□ 2.37
CLTA-202ENST00000345519 STAG3Q9UJ98 1225 aa29.83■■■□□ 2.37
CLTA-202ENST00000345519 EID1Q9Y6B2 187 aa29.83■■■□□ 2.37
CLTA-202ENST00000345519 RIMS2Q9UQ26 1411 aa29.82■■■□□ 2.36
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms