RNA–Protein interactions for RNA: ENST00000342690.4

RBM38-201, Transcript of RNA binding motif protein 38, humanhuman

TSL 3

Gene RBM38, Length 852 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM38-201ENST00000342690 PTPRMP28827 1452 aa33.21■■■□□ 2.91
RBM38-201ENST00000342690 CLTCQ00610 1675 aaKnown RBP33.17■■■□□ 2.9
RBM38-201ENST00000342690 DEPDC5O75140 1603 aa33.17■■■□□ 2.9
RBM38-201ENST00000342690 GCC2Q8IWJ2 1684 aa33.15■■■□□ 2.9
RBM38-201ENST00000342690 CNTLNQ9NXG0 1405 aa33.15■■■□□ 2.9
RBM38-201ENST00000342690 PRDM15P57071 1507 aaPredicted RBP33.14■■■□□ 2.9
RBM38-201ENST00000342690 FAM135AQ9P2D6 1515 aa33.14■■■□□ 2.9
RBM38-201ENST00000342690 ESF1Q9H501 851 aaKnown RBP33.14■■■□□ 2.9
RBM38-201ENST00000342690 KDM5DQ9BY66 1539 aa33.13■■■□□ 2.89
RBM38-201ENST00000342690 PPP6R1Q9UPN7 881 aa33.13■■■□□ 2.89
RBM38-201ENST00000342690 MROH2AA6NES4 1674 aa33.13■■■□□ 2.89
RBM38-201ENST00000342690 NAIPQ13075 1403 aa33.11■■■□□ 2.89
RBM38-201ENST00000342690 HFM1A2PYH4 1435 aa33.1■■■□□ 2.89
RBM38-201ENST00000342690 AEBP2Q6ZN18 517 aaPredicted RBP33.09■■■□□ 2.89
RBM38-201ENST00000342690 C3P01024 1663 aa33.09■■■□□ 2.89
RBM38-201ENST00000342690 ZC3H13Q5T200 1668 aaKnown RBP33.08■■■□□ 2.89
RBM38-201ENST00000342690 ABCC3O15438 1527 aa33.07■■■□□ 2.88
RBM38-201ENST00000342690 CEP152O94986 1710 aa33.06■■■□□ 2.88
RBM38-201ENST00000342690 UNC13BO14795 1591 aa33.06■■■□□ 2.88
RBM38-201ENST00000342690 TRIM26Q12899 539 aaPredicted RBP33.05■■■□□ 2.88
RBM38-201ENST00000342690 WASHC2CQ9Y4E1 1318 aa33.04■■■□□ 2.88
RBM38-201ENST00000342690 PLPPR3Q6T4P5 718 aa33.04■■■□□ 2.88
RBM38-201ENST00000342690 VWDEQ8N2E2 1590 aa33.04■■■□□ 2.88
RBM38-201ENST00000342690 CEBPAP49715 358 aaPredicted RBP33.03■■■□□ 2.88
RBM38-201ENST00000342690 GRWD1Q9BQ67 446 aaKnown RBP eCLIP33.03■■■□□ 2.88
RBM38-201ENST00000342690 ZMYM3Q14202 1370 aa33.03■■■□□ 2.88
RBM38-201ENST00000342690 KANK1Q14678 1352 aa32.99■■■□□ 2.87
RBM38-201ENST00000342690 CAMSAP1Q5T5Y3 1602 aa32.98■■■□□ 2.87
RBM38-201ENST00000342690 LMTK2Q8IWU2 1503 aa32.95■■■□□ 2.87
RBM38-201ENST00000342690 PZPP20742 1482 aa32.93■■■□□ 2.86
RBM38-201ENST00000342690 IQGAP3Q86VI3 1631 aa32.91■■■□□ 2.86
RBM38-201ENST00000342690 NPATQ14207 1427 aa32.87■■■□□ 2.85
RBM38-201ENST00000342690 EFCAB6Q5THR3 1501 aa32.87■■■□□ 2.85
RBM38-201ENST00000342690 SETD5Q9C0A6 1442 aa32.86■■■□□ 2.85
RBM38-201ENST00000342690 NUP155O75694 1391 aa32.86■■■□□ 2.85
RBM38-201ENST00000342690 TET3O43151 1660 aa32.86■■■□□ 2.85
RBM38-201ENST00000342690 ARHGAP31Q2M1Z3 1444 aa32.85■■■□□ 2.85
RBM38-201ENST00000342690 PREX1Q8TCU6 1659 aa32.82■■■□□ 2.84
RBM38-201ENST00000342690 FBXO31Q5XUX0 539 aaPredicted RBP32.82■■■□□ 2.84
RBM38-201ENST00000342690 ERVK-7P63135 1459 aa32.8■■■□□ 2.84
RBM38-201ENST00000342690 SPATA31D1Q6ZQQ2 1576 aa32.79■■■□□ 2.84
RBM38-201ENST00000342690 SETD1BQ9UPS6 1966 aaKnown RBP32.79■■■□□ 2.84
RBM38-201ENST00000342690 RAB3GAP2Q9H2M9 1393 aa32.77■■■□□ 2.84
RBM38-201ENST00000342690 CFAP65Q6ZU64 1925 aaKnown RBP32.77■■■□□ 2.84
RBM38-201ENST00000342690 MYO3AQ8NEV4 1616 aa32.77■■■□□ 2.84
RBM38-201ENST00000342690 E9PCH4 1651 aa32.75■■■□□ 2.83
RBM38-201ENST00000342690 LMTK3Q96Q04 1460 aa32.75■■■□□ 2.83
RBM38-201ENST00000342690 TRIM52Q96A61 297 aa32.75■■■□□ 2.83
RBM38-201ENST00000342690 TNRQ92752 1358 aa32.74■■■□□ 2.83
RBM38-201ENST00000342690 UHRF1BP1Q6BDS2 1440 aa32.74■■■□□ 2.83
RBM38-201ENST00000342690 RPRD2Q5VT52 1461 aaKnown RBP32.73■■■□□ 2.83
RBM38-201ENST00000342690 ZNF142P52746 1687 aaPredicted RBP32.68■■■□□ 2.82
RBM38-201ENST00000342690 NOS1P29475 1434 aa32.67■■■□□ 2.82
RBM38-201ENST00000342690 SYNMO15061 1565 aa32.66■■■□□ 2.82
RBM38-201ENST00000342690 PCGF6Q9BYE7 350 aa32.65■■■□□ 2.82
RBM38-201ENST00000342690 ACIN1Q9UKV3 1341 aaKnown RBP32.65■■■□□ 2.82
RBM38-201ENST00000342690 CEP170BQ9Y4F5 1589 aaPredicted RBP32.65■■■□□ 2.82
RBM38-201ENST00000342690 NLRP1Q9C000 1473 aa32.63■■■□□ 2.81
RBM38-201ENST00000342690 A2ML1A8K2U0 1454 aa32.61■■■□□ 2.81
RBM38-201ENST00000342690 SLC4A1APQ9BWU0 796 aaKnown RBP32.61■■■□□ 2.81
RBM38-201ENST00000342690 HRCP23327 699 aa32.59■■■□□ 2.81
RBM38-201ENST00000342690 HSPA2P54652 639 aa32.57■■■□□ 2.8
RBM38-201ENST00000342690 PKD2Q13563 968 aa32.57■■■□□ 2.8
RBM38-201ENST00000342690 SPHKAPQ2M3C7 1700 aa32.57■■■□□ 2.8
RBM38-201ENST00000342690 MPHOSPH9Q99550 1183 aa32.54■■■□□ 2.8
RBM38-201ENST00000342690 PIK3C2BO00750 1634 aa32.53■■■□□ 2.8
RBM38-201ENST00000342690 PTPRTO14522 1441 aa32.52■■■□□ 2.8
RBM38-201ENST00000342690 UGGT1Q9NYU2 1555 aa32.51■■■□□ 2.79
RBM38-201ENST00000342690 UBR1Q8IWV7 1749 aa32.49■■■□□ 2.79
RBM38-201ENST00000342690 IDI1Q13907 227 aa32.48■■■□□ 2.79
RBM38-201ENST00000342690 TRPM2O94759 1503 aa32.47■■■□□ 2.79
RBM38-201ENST00000342690 SLC52A1Q9NWF4 448 aa32.47■■■□□ 2.79
RBM38-201ENST00000342690 FOXD1Q16676 465 aa32.46■■■□□ 2.79
RBM38-201ENST00000342690 PLA2R1Q13018 1463 aa32.46■■■□□ 2.79
RBM38-201ENST00000342690 ADGRB3O60242 1522 aa32.44■■■□□ 2.78
RBM38-201ENST00000342690 KDM5AP29375 1690 aaKnown RBP32.43■■■□□ 2.78
RBM38-201ENST00000342690 CLTCL1P53675 1640 aa32.42■■■□□ 2.78
RBM38-201ENST00000342690 STRCQ7RTU9 1775 aa32.39■■■□□ 2.78
RBM38-201ENST00000342690 THEMISQ8N1K5 641 aaPredicted RBP32.38■■■□□ 2.77
RBM38-201ENST00000342690 TMEM131LA2VDJ0 1609 aa32.37■■■□□ 2.77
RBM38-201ENST00000342690 MYO5BQ9ULV0 1848 aa32.36■■■□□ 2.77
RBM38-201ENST00000342690 STAG3Q9UJ98 1225 aa32.36■■■□□ 2.77
RBM38-201ENST00000342690 SLIT1O75093 1534 aa32.32■■■□□ 2.76
RBM38-201ENST00000342690 POLR1AO95602 1720 aaPredicted RBP32.31■■■□□ 2.76
RBM38-201ENST00000342690 ARHGAP23Q9P227 1491 aa32.31■■■□□ 2.76
RBM38-201ENST00000342690 CHGAP10645 457 aaKnown RBP32.29■■■□□ 2.76
RBM38-201ENST00000342690 NCKAP5LQ9HCH0 1330 aa32.28■■■□□ 2.76
RBM38-201ENST00000342690 KIF1BO60333 1816 aa32.28■■■□□ 2.76
RBM38-201ENST00000342690 TMEM2Q9UHN6 1383 aa32.28■■■□□ 2.76
RBM38-201ENST00000342690 CCDC144AA2RUR9 1427 aa32.26■■■□□ 2.76
RBM38-201ENST00000342690 NEURL4Q96JN8 1562 aa32.26■■■□□ 2.75
RBM38-201ENST00000342690 ANKRD30BQ9BXX2 1392 aa32.24■■■□□ 2.75
RBM38-201ENST00000342690 ANKLE2Q86XL3 938 aa32.23■■■□□ 2.75
RBM38-201ENST00000342690 SCAF11Q99590 1463 aaKnown RBP32.22■■■□□ 2.75
RBM38-201ENST00000342690 ZFYVE9O95405 1425 aa32.2■■■□□ 2.75
RBM38-201ENST00000342690 RIMS2Q9UQ26 1411 aa32.19■■■□□ 2.74
RBM38-201ENST00000342690 LTKP29376 864 aa32.19■■■□□ 2.74
RBM38-201ENST00000342690 DHX57Q6P158 1386 aaKnown RBP32.19■■■□□ 2.74
RBM38-201ENST00000342690 MED14O60244 1454 aa32.17■■■□□ 2.74
RBM38-201ENST00000342690 TXNDC2Q86VQ3 553 aa32.17■■■□□ 2.74
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms