RNA–Protein interactions for RNA: ENST00000342644.9

SNX21-201, Transcript of sorting nexin family member 21, humanhuman

TSL 1 (best) BASIC

Gene SNX21, Length 1,506 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX21-201ENST00000342644 RNF17Q9BXT8 1623 aaKnown RBP30.65■■■□□ 2.5
SNX21-201ENST00000342644 KDM5DQ9BY66 1539 aa30.63■■■□□ 2.49
SNX21-201ENST00000342644 SIGLEC1Q9BZZ2 1709 aa30.61■■■□□ 2.49
SNX21-201ENST00000342644 PRDM15P57071 1507 aaPredicted RBP30.6■■■□□ 2.49
SNX21-201ENST00000342644 MROH1Q8NDA8 1641 aa30.6■■■□□ 2.49
SNX21-201ENST00000342644 TRIM52Q96A61 297 aa30.58■■■□□ 2.49
SNX21-201ENST00000342644 NUP155O75694 1391 aa30.58■■■□□ 2.49
SNX21-201ENST00000342644 VWDEQ8N2E2 1590 aa30.56■■■□□ 2.48
SNX21-201ENST00000342644 IQGAP3Q86VI3 1631 aa30.55■■■□□ 2.48
SNX21-201ENST00000342644 PZPP20742 1482 aa30.53■■■□□ 2.48
SNX21-201ENST00000342644 KANK1Q14678 1352 aa30.53■■■□□ 2.48
SNX21-201ENST00000342644 PPP6R1Q9UPN7 881 aa30.52■■■□□ 2.48
SNX21-201ENST00000342644 DHX57Q6P158 1386 aaKnown RBP30.51■■■□□ 2.48
SNX21-201ENST00000342644 GGT6Q6P531 493 aa30.51■■■□□ 2.47
SNX21-201ENST00000342644 GRWD1Q9BQ67 446 aaKnown RBP eCLIP30.51■■■□□ 2.473e-6■■□□□ 11.7
SNX21-201ENST00000342644 FAM135AQ9P2D6 1515 aa30.5■■■□□ 2.47
SNX21-201ENST00000342644 MPHOSPH9Q99550 1183 aa30.49■■■□□ 2.47
SNX21-201ENST00000342644 LMTK2Q8IWU2 1503 aa30.48■■■□□ 2.47
SNX21-201ENST00000342644 ARID4BQ4LE39 1312 aaPredicted RBP30.46■■■□□ 2.47
SNX21-201ENST00000342644 SLC4A1APQ9BWU0 796 aaKnown RBP30.46■■■□□ 2.47
SNX21-201ENST00000342644 ZC3H13Q5T200 1668 aaKnown RBP30.45■■■□□ 2.46
SNX21-201ENST00000342644 ABCC3O15438 1527 aa30.42■■■□□ 2.46
SNX21-201ENST00000342644 TET3O43151 1660 aa30.41■■■□□ 2.46
SNX21-201ENST00000342644 WASHC2CQ9Y4E1 1318 aa30.4■■■□□ 2.46
SNX21-201ENST00000342644 CEP152O94986 1710 aa30.39■■■□□ 2.46
SNX21-201ENST00000342644 MLECQ14165 292 aa30.37■■■□□ 2.45
SNX21-201ENST00000342644 PKD2Q13563 968 aa30.36■■■□□ 2.45
SNX21-201ENST00000342644 CLSPNQ9HAW4 1339 aa30.35■■■□□ 2.45
SNX21-201ENST00000342644 EFCAB6Q5THR3 1501 aa30.35■■■□□ 2.45
SNX21-201ENST00000342644 CCER1Q8TC90 406 aaPredicted RBP30.35■■■□□ 2.45
SNX21-201ENST00000342644 CAMSAP1Q5T5Y3 1602 aa30.33■■■□□ 2.45
SNX21-201ENST00000342644 ARHGAP31Q2M1Z3 1444 aa30.33■■■□□ 2.45
SNX21-201ENST00000342644 E9PCH4 1651 aa30.31■■■□□ 2.44
SNX21-201ENST00000342644 CNTLNQ9NXG0 1405 aa30.31■■■□□ 2.44
SNX21-201ENST00000342644 RPRD2Q5VT52 1461 aaKnown RBP30.31■■■□□ 2.44
SNX21-201ENST00000342644 CLTCQ00610 1675 aaKnown RBP30.29■■■□□ 2.44
SNX21-201ENST00000342644 ESF1Q9H501 851 aaKnown RBP30.27■■■□□ 2.44
SNX21-201ENST00000342644 MROH2AA6NES4 1674 aa30.26■■■□□ 2.43
SNX21-201ENST00000342644 NPATQ14207 1427 aa30.26■■■□□ 2.43
SNX21-201ENST00000342644 ADAMTSL3P82987 1691 aa30.25■■■□□ 2.43
SNX21-201ENST00000342644 ANKRD30BQ9BXX2 1392 aa30.25■■■□□ 2.43
SNX21-201ENST00000342644 FER1L4A9Z1Z3 1794 aa30.25■■■□□ 2.43
SNX21-201ENST00000342644 FOXD1Q16676 465 aa30.24■■■□□ 2.43
SNX21-201ENST00000342644 PTPRTO14522 1441 aa30.21■■■□□ 2.43
SNX21-201ENST00000342644 ZMYM3Q14202 1370 aa30.2■■■□□ 2.43
SNX21-201ENST00000342644 MADDQ8WXG6 1647 aa30.18■■■□□ 2.42
SNX21-201ENST00000342644 PLA2R1Q13018 1463 aa30.18■■■□□ 2.42
SNX21-201ENST00000342644 SPHKAPQ2M3C7 1700 aa30.18■■■□□ 2.42
SNX21-201ENST00000342644 NOS1P29475 1434 aa30.15■■■□□ 2.42
SNX21-201ENST00000342644 TRPM2O94759 1503 aa30.15■■■□□ 2.42
SNX21-201ENST00000342644 PREX1Q8TCU6 1659 aa30.13■■■□□ 2.41
SNX21-201ENST00000342644 CFAP65Q6ZU64 1925 aaKnown RBP30.11■■■□□ 2.41
SNX21-201ENST00000342644 SPATA31D1Q6ZQQ2 1576 aa30.1■■■□□ 2.41
SNX21-201ENST00000342644 RIMS1Q86UR5 1692 aaKnown RBP30.1■■■□□ 2.41
SNX21-201ENST00000342644 ERVK-7P63135 1459 aa30.1■■■□□ 2.41
SNX21-201ENST00000342644 C3P01024 1663 aa30.1■■■□□ 2.41
SNX21-201ENST00000342644 CCDC144AA2RUR9 1427 aa30.07■■■□□ 2.4
SNX21-201ENST00000342644 SIN3AQ96ST3 1273 aa30.06■■■□□ 2.4
SNX21-201ENST00000342644 FBXO31Q5XUX0 539 aaPredicted RBP30.06■■■□□ 2.4
SNX21-201ENST00000342644 SYNMO15061 1565 aa30.05■■■□□ 2.4
SNX21-201ENST00000342644 PIK3C2BO00750 1634 aa30.02■■■□□ 2.4
SNX21-201ENST00000342644 SLC52A1Q9NWF4 448 aa30.01■■■□□ 2.4
SNX21-201ENST00000342644 CLTCL1P53675 1640 aa30.01■■■□□ 2.39
SNX21-201ENST00000342644 ZEB1P37275 1124 aaPredicted RBP30.01■■■□□ 2.39
SNX21-201ENST00000342644 CEBPAP49715 358 aaPredicted RBP29.99■■■□□ 2.39
SNX21-201ENST00000342644 PTPRMP28827 1452 aa29.98■■■□□ 2.39
SNX21-201ENST00000342644 NEUROD1Q13562 356 aa29.97■■■□□ 2.39
SNX21-201ENST00000342644 TIMELESSQ9UNS1 1208 aa29.97■■■□□ 2.39
SNX21-201ENST00000342644 NEURL4Q96JN8 1562 aa29.96■■■□□ 2.39
SNX21-201ENST00000342644 UGGT1Q9NYU2 1555 aa29.96■■■□□ 2.39
SNX21-201ENST00000342644 TNRQ92752 1358 aa29.96■■■□□ 2.39
SNX21-201ENST00000342644 KDM4FA0A1W2PPD8 638 aa29.94■■■□□ 2.38
SNX21-201ENST00000342644 KIF1BO60333 1816 aa29.92■■■□□ 2.38
SNX21-201ENST00000342644 IDI1Q13907 227 aa29.92■■■□□ 2.38
SNX21-201ENST00000342644 SPATA31E1Q6ZUB1 1445 aa29.91■■■□□ 2.38
SNX21-201ENST00000342644 SETD1BQ9UPS6 1966 aaKnown RBP29.9■■■□□ 2.38
SNX21-201ENST00000342644 NLRP1Q9C000 1473 aa29.89■■■□□ 2.38
SNX21-201ENST00000342644 TONSLQ96HA7 1378 aa29.87■■■□□ 2.37
SNX21-201ENST00000342644 ADGRB3O60242 1522 aa29.87■■■□□ 2.37
SNX21-201ENST00000342644 KDM5AP29375 1690 aaKnown RBP29.85■■■□□ 2.37
SNX21-201ENST00000342644 TMEM131LA2VDJ0 1609 aa29.83■■■□□ 2.37
SNX21-201ENST00000342644 PLPPR3Q6T4P5 718 aa29.82■■■□□ 2.36
SNX21-201ENST00000342644 MYO3AQ8NEV4 1616 aa29.81■■■□□ 2.36
SNX21-201ENST00000342644 L3MBTL2Q969R5 705 aa29.81■■■□□ 2.36
SNX21-201ENST00000342644 RGL3Q3MIN7 710 aa29.76■■■□□ 2.36
SNX21-201ENST00000342644 A2ML1A8K2U0 1454 aa29.76■■■□□ 2.35
SNX21-201ENST00000342644 CHGAP10645 457 aaKnown RBP29.76■■■□□ 2.35
SNX21-201ENST00000342644 STAC3Q96MF2 364 aa29.76■■■□□ 2.35
SNX21-201ENST00000342644 UBR1Q8IWV7 1749 aa29.75■■■□□ 2.35
SNX21-201ENST00000342644 RPGRIP1LQ68CZ1 1315 aa29.75■■■□□ 2.35
SNX21-201ENST00000342644 MYO5BQ9ULV0 1848 aa29.74■■■□□ 2.35
SNX21-201ENST00000342644 ZNF142P52746 1687 aaPredicted RBP29.74■■■□□ 2.35
SNX21-201ENST00000342644 STAG3Q9UJ98 1225 aa29.74■■■□□ 2.35
SNX21-201ENST00000342644 CEP170BQ9Y4F5 1589 aaPredicted RBP29.73■■■□□ 2.35
SNX21-201ENST00000342644 PPP1R15AO75807 674 aaPredicted RBP29.71■■■□□ 2.35
SNX21-201ENST00000342644 IFT172Q9UG01 1749 aa29.71■■■□□ 2.35
SNX21-201ENST00000342644 UHRF1BP1Q6BDS2 1440 aa29.69■■■□□ 2.34
SNX21-201ENST00000342644 ZNF326Q5BKZ1 582 aaKnown RBP29.69■■■□□ 2.34
SNX21-201ENST00000342644 DCAF11Q8TEB1 546 aa29.69■■■□□ 2.34
SNX21-201ENST00000342644 NEXMIFQ5QGS0 1516 aa29.68■■■□□ 2.34
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms