RNA–Protein interactions for RNA: ENST00000342631.7

SNED1-202, Transcript of sushi, nidogen and EGF like domains 1, humanhuman

TSL 1 (best) BASIC

Gene SNED1, Length 1,930 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1-202ENST00000342631 TRIM52Q96A61 297 aa24.16■■□□□ 1.46
SNED1-202ENST00000342631 RNF17Q9BXT8 1623 aaKnown RBP24.15■■□□□ 1.46
SNED1-202ENST00000342631 KIF3BO15066 747 aa24.15■■□□□ 1.46
SNED1-202ENST00000342631 NUP155O75694 1391 aa24.12■■□□□ 1.45
SNED1-202ENST00000342631 DHX57Q6P158 1386 aaKnown RBP24.12■■□□□ 1.45
SNED1-202ENST00000342631 PRDM15P57071 1507 aaPredicted RBP24.12■■□□□ 1.45
SNED1-202ENST00000342631 IQGAP3Q86VI3 1631 aa24.1■■□□□ 1.45
SNED1-202ENST00000342631 KANK1Q14678 1352 aa24.1■■□□□ 1.45
SNED1-202ENST00000342631 PZPP20742 1482 aa24.08■■□□□ 1.45
SNED1-202ENST00000342631 MROH1Q8NDA8 1641 aa24.08■■□□□ 1.44
SNED1-202ENST00000342631 CCER1Q8TC90 406 aaPredicted RBP24.08■■□□□ 1.44
SNED1-202ENST00000342631 VWDEQ8N2E2 1590 aa24.07■■□□□ 1.44
SNED1-202ENST00000342631 CLSPNQ9HAW4 1339 aa24.07■■□□□ 1.44
SNED1-202ENST00000342631 MPHOSPH9Q99550 1183 aa24.07■■□□□ 1.44
SNED1-202ENST00000342631 FAM135AQ9P2D6 1515 aa24.07■■□□□ 1.44
SNED1-202ENST00000342631 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.06■■□□□ 1.44
SNED1-202ENST00000342631 PPP6R1Q9UPN7 881 aa24.06■■□□□ 1.44
SNED1-202ENST00000342631 SLC4A1APQ9BWU0 796 aaKnown RBP24.05■■□□□ 1.44
SNED1-202ENST00000342631 SIGLEC1Q9BZZ2 1709 aa24.03■■□□□ 1.44
SNED1-202ENST00000342631 LMTK2Q8IWU2 1503 aa24.02■■□□□ 1.44
SNED1-202ENST00000342631 GGT6Q6P531 493 aa24.02■■□□□ 1.44
SNED1-202ENST00000342631 ZC3H13Q5T200 1668 aaKnown RBP24■■□□□ 1.43
SNED1-202ENST00000342631 TET3O43151 1660 aa23.99■■□□□ 1.43
SNED1-202ENST00000342631 ARID4BQ4LE39 1312 aaPredicted RBP23.96■■□□□ 1.43
SNED1-202ENST00000342631 PKD2Q13563 968 aa23.96■■□□□ 1.43
SNED1-202ENST00000342631 WASHC2CQ9Y4E1 1318 aa23.95■■□□□ 1.42
SNED1-202ENST00000342631 ABCC3O15438 1527 aa23.95■■□□□ 1.42
SNED1-202ENST00000342631 CEP152O94986 1710 aa23.94■■□□□ 1.42
SNED1-202ENST00000342631 EFCAB6Q5THR3 1501 aa23.92■■□□□ 1.42
SNED1-202ENST00000342631 RPRD2Q5VT52 1461 aaKnown RBP23.9■■□□□ 1.42
SNED1-202ENST00000342631 E9PCH4 1651 aa23.89■■□□□ 1.42
SNED1-202ENST00000342631 CAMSAP1Q5T5Y3 1602 aa23.89■■□□□ 1.41
SNED1-202ENST00000342631 ARHGAP31Q2M1Z3 1444 aa23.89■■□□□ 1.41
SNED1-202ENST00000342631 ANKRD30BQ9BXX2 1392 aa23.88■■□□□ 1.41
SNED1-202ENST00000342631 MLECQ14165 292 aa23.87■■□□□ 1.41
SNED1-202ENST00000342631 CNTLNQ9NXG0 1405 aa23.87■■□□□ 1.41
SNED1-202ENST00000342631 ESF1Q9H501 851 aaKnown RBP23.86■■□□□ 1.41
SNED1-202ENST00000342631 FOXD1Q16676 465 aa23.84■■□□□ 1.41
SNED1-202ENST00000342631 CLTCQ00610 1675 aaKnown RBP23.84■■□□□ 1.41
SNED1-202ENST00000342631 NPATQ14207 1427 aa23.82■■□□□ 1.4
SNED1-202ENST00000342631 MROH2AA6NES4 1674 aa23.82■■□□□ 1.4
SNED1-202ENST00000342631 PTPRTO14522 1441 aa23.82■■□□□ 1.4
SNED1-202ENST00000342631 ZEB1P37275 1124 aaPredicted RBP23.81■■□□□ 1.4
SNED1-202ENST00000342631 SPHKAPQ2M3C7 1700 aa23.8■■□□□ 1.4
SNED1-202ENST00000342631 FER1L4A9Z1Z3 1794 aa23.79■■□□□ 1.4
SNED1-202ENST00000342631 TRPM2O94759 1503 aa23.78■■□□□ 1.4
SNED1-202ENST00000342631 PLA2R1Q13018 1463 aa23.77■■□□□ 1.4
SNED1-202ENST00000342631 ADAMTSL3P82987 1691 aa23.76■■□□□ 1.39
SNED1-202ENST00000342631 ZMYM3Q14202 1370 aa23.76■■□□□ 1.39
SNED1-202ENST00000342631 CCDC144AA2RUR9 1427 aa23.75■■□□□ 1.39
SNED1-202ENST00000342631 TIMELESSQ9UNS1 1208 aa23.75■■□□□ 1.39
SNED1-202ENST00000342631 NOS1P29475 1434 aa23.75■■□□□ 1.39
SNED1-202ENST00000342631 SIN3AQ96ST3 1273 aa23.74■■□□□ 1.39
SNED1-202ENST00000342631 PREX1Q8TCU6 1659 aa23.73■■□□□ 1.39
SNED1-202ENST00000342631 CFAP65Q6ZU64 1925 aaKnown RBP23.71■■□□□ 1.39
SNED1-202ENST00000342631 NEUROD1Q13562 356 aa23.71■■□□□ 1.39
SNED1-202ENST00000342631 MADDQ8WXG6 1647 aa23.7■■□□□ 1.38
SNED1-202ENST00000342631 ERVK-7P63135 1459 aa23.7■■□□□ 1.38
SNED1-202ENST00000342631 SPATA31D1Q6ZQQ2 1576 aa23.69■■□□□ 1.38
SNED1-202ENST00000342631 SLC52A1Q9NWF4 448 aa23.67■■□□□ 1.38
SNED1-202ENST00000342631 CLTCL1P53675 1640 aa23.66■■□□□ 1.38
SNED1-202ENST00000342631 C3P01024 1663 aa23.66■■□□□ 1.38
SNED1-202ENST00000342631 SYNMO15061 1565 aa23.66■■□□□ 1.38
SNED1-202ENST00000342631 RIMS1Q86UR5 1692 aaKnown RBP23.66■■□□□ 1.38
SNED1-202ENST00000342631 TONSLQ96HA7 1378 aa23.65■■□□□ 1.38
SNED1-202ENST00000342631 NEURL4Q96JN8 1562 aa23.65■■□□□ 1.38
SNED1-202ENST00000342631 PIK3C2BO00750 1634 aa23.65■■□□□ 1.38
SNED1-202ENST00000342631 FBXO31Q5XUX0 539 aaPredicted RBP23.63■■□□□ 1.37
SNED1-202ENST00000342631 KIF1BO60333 1816 aa23.62■■□□□ 1.37
SNED1-202ENST00000342631 UGGT1Q9NYU2 1555 aa23.59■■□□□ 1.37
SNED1-202ENST00000342631 TNRQ92752 1358 aa23.58■■□□□ 1.37
SNED1-202ENST00000342631 SPATA31E1Q6ZUB1 1445 aa23.58■■□□□ 1.37
SNED1-202ENST00000342631 IDI1Q13907 227 aa23.55■■□□□ 1.36
SNED1-202ENST00000342631 CEBPAP49715 358 aaPredicted RBP23.55■■□□□ 1.36
SNED1-202ENST00000342631 ADGRB3O60242 1522 aa23.55■■□□□ 1.36
SNED1-202ENST00000342631 NLRP1Q9C000 1473 aa23.54■■□□□ 1.36
SNED1-202ENST00000342631 L3MBTL2Q969R5 705 aa23.54■■□□□ 1.36
SNED1-202ENST00000342631 PTPRMP28827 1452 aa23.53■■□□□ 1.36
SNED1-202ENST00000342631 STAC3Q96MF2 364 aa23.53■■□□□ 1.36
SNED1-202ENST00000342631 KDM5AP29375 1690 aaKnown RBP23.52■■□□□ 1.36
SNED1-202ENST00000342631 SETD1BQ9UPS6 1966 aaKnown RBP23.5■■□□□ 1.35
SNED1-202ENST00000342631 TMEM131LA2VDJ0 1609 aa23.5■■□□□ 1.35
SNED1-202ENST00000342631 PPP1R15AO75807 674 aaPredicted RBP23.49■■□□□ 1.35
SNED1-202ENST00000342631 RPGRIP1LQ68CZ1 1315 aa23.49■■□□□ 1.35
SNED1-202ENST00000342631 RGL3Q3MIN7 710 aa23.48■■□□□ 1.35
SNED1-202ENST00000342631 CHGAP10645 457 aaKnown RBP23.46■■□□□ 1.35
SNED1-202ENST00000342631 STAG3Q9UJ98 1225 aa23.45■■□□□ 1.35
SNED1-202ENST00000342631 MYO3AQ8NEV4 1616 aa23.44■■□□□ 1.34
SNED1-202ENST00000342631 KDM4FA0A1W2PPD8 638 aa23.44■■□□□ 1.34
SNED1-202ENST00000342631 DCAF11Q8TEB1 546 aa23.44■■□□□ 1.34
SNED1-202ENST00000342631 IFT172Q9UG01 1749 aa23.43■■□□□ 1.34
SNED1-202ENST00000342631 A2ML1A8K2U0 1454 aa23.43■■□□□ 1.34
SNED1-202ENST00000342631 ZNF326Q5BKZ1 582 aaKnown RBP23.43■■□□□ 1.34
SNED1-202ENST00000342631 PLPPR3Q6T4P5 718 aa23.43■■□□□ 1.34
SNED1-202ENST00000342631 MYO5BQ9ULV0 1848 aa23.42■■□□□ 1.34
SNED1-202ENST00000342631 UHRF1BP1Q6BDS2 1440 aa23.42■■□□□ 1.34
SNED1-202ENST00000342631 UBR1Q8IWV7 1749 aa23.42■■□□□ 1.34
SNED1-202ENST00000342631 MYOM2P54296 1465 aa23.41■■□□□ 1.34
SNED1-202ENST00000342631 PPLO60437 1756 aa23.4■■□□□ 1.34
SNED1-202ENST00000342631 ZNF142P52746 1687 aaPredicted RBP23.39■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms