RNA–Protein interactions for RNA: ENST00000341400.11

NPIPB4-202, Transcript of nuclear pore complex interacting protein family member B4, humanhuman

TSL 2

Gene NPIPB4, Length 767 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB4-202ENST00000341400 RBM33Q96EV2 1170 aaKnown RBP12.27□□□□□ -0.45
NPIPB4-202ENST00000341400 SLAIN1Q8ND83 568 aa12.26□□□□□ -0.45
NPIPB4-202ENST00000341400 TYW1BQ6NUM6 668 aa12.25□□□□□ -0.45
NPIPB4-202ENST00000341400 TMUB1Q9BVT8 246 aa12.25□□□□□ -0.45
NPIPB4-202ENST00000341400 GPCPD1Q9NPB8 672 aa12.25□□□□□ -0.45
NPIPB4-202ENST00000341400 PCDHGA10Q9Y5H3 936 aa12.25□□□□□ -0.45
NPIPB4-202ENST00000341400 MDM2Q00987 491 aaPredicted RBP12.24□□□□□ -0.45
NPIPB4-202ENST00000341400 METRNQ9UJH8 293 aa12.24□□□□□ -0.45
NPIPB4-202ENST00000341400 TSR1Q2NL82 804 aaKnown RBP12.23□□□□□ -0.45
NPIPB4-202ENST00000341400 SH3D19Q5HYK7 790 aa12.23□□□□□ -0.45
NPIPB4-202ENST00000341400 ONECUT3O60422 494 aaPredicted RBP12.22□□□□□ -0.45
NPIPB4-202ENST00000341400 FBXW7Q969H0 707 aa12.22□□□□□ -0.45
NPIPB4-202ENST00000341400 PCDHGA4Q9Y5G9 962 aa12.22□□□□□ -0.45
NPIPB4-202ENST00000341400 UBTFP17480 764 aaKnown RBP12.21□□□□□ -0.45
NPIPB4-202ENST00000341400 SSTR3P32745 418 aaPredicted RBP12.2□□□□□ -0.46
NPIPB4-202ENST00000341400 PHOX2BQ99453 314 aa12.2□□□□□ -0.46
NPIPB4-202ENST00000341400 JPH4Q96JJ6 628 aa12.19□□□□□ -0.46
NPIPB4-202ENST00000341400 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.19□□□□□ -0.46
NPIPB4-202ENST00000341400 ARID3AQ99856 593 aa12.18□□□□□ -0.46
NPIPB4-202ENST00000341400 OATP04181 439 aa12.17□□□□□ -0.46
NPIPB4-202ENST00000341400 SKIV2LQ15477 1246 aaKnown RBP12.17□□□□□ -0.46
NPIPB4-202ENST00000341400 CERKQ8TCT0 537 aa12.17□□□□□ -0.46
NPIPB4-202ENST00000341400 C1orf115Q9H7X2 142 aa12.17□□□□□ -0.46
NPIPB4-202ENST00000341400 APBB1O00213 710 aa12.15□□□□□ -0.46
NPIPB4-202ENST00000341400 METTL3Q86U44 580 aaKnown RBP12.15□□□□□ -0.46
NPIPB4-202ENST00000341400 BEGAINQ9BUH8 593 aa12.15□□□□□ -0.46
NPIPB4-202ENST00000341400 A6NJR5 290 aa12.14□□□□□ -0.47
NPIPB4-202ENST00000341400 ARID3CA6NKF2 412 aa12.14□□□□□ -0.47
NPIPB4-202ENST00000341400 FAM217BQ9NTX9 383 aaPredicted RBP12.14□□□□□ -0.47
NPIPB4-202ENST00000341400 FAM161AQ3B820 660 aa12.13□□□□□ -0.47
NPIPB4-202ENST00000341400 ATP1B4Q9UN42 357 aaPredicted RBP12.13□□□□□ -0.47
NPIPB4-202ENST00000341400 KDM4FA0A1W2PPD8 638 aa12.12□□□□□ -0.47
NPIPB4-202ENST00000341400 FOSBP53539 338 aa12.12□□□□□ -0.47
NPIPB4-202ENST00000341400 C6orf132Q5T0Z8 1188 aa12.12□□□□□ -0.47
NPIPB4-202ENST00000341400 PADI6Q6TGC4 694 aa12.12□□□□□ -0.47
NPIPB4-202ENST00000341400 MCM6Q14566 821 aa12.11□□□□□ -0.47
NPIPB4-202ENST00000341400 PXYLP1Q8TE99 480 aa12.11□□□□□ -0.47
NPIPB4-202ENST00000341400 CLUAP1Q96AJ1 413 aa12.11□□□□□ -0.47
NPIPB4-202ENST00000341400 ZDHHC16Q969W1 377 aa12.1□□□□□ -0.47
NPIPB4-202ENST00000341400 RBM27Q9P2N5 1060 aaKnown RBP12.1□□□□□ -0.47
NPIPB4-202ENST00000341400 ADGRG1Q9Y653 693 aa12.1□□□□□ -0.47
NPIPB4-202ENST00000341400 TRAK2O60296 914 aa12.08□□□□□ -0.48
NPIPB4-202ENST00000341400 ZNF454Q8N9F8 522 aa12.08□□□□□ -0.48
NPIPB4-202ENST00000341400 NLRP7Q8WX94 980 aa12.08□□□□□ -0.48
NPIPB4-202ENST00000341400 POTEIP0CG38 1075 aa12.07□□□□□ -0.48
NPIPB4-202ENST00000341400 PROCA1Q8NCQ7 364 aaPredicted RBP12.07□□□□□ -0.48
NPIPB4-202ENST00000341400 POLR3EQ9NVU0 708 aa12.07□□□□□ -0.48
NPIPB4-202ENST00000341400 TTC13Q8NBP0 860 aa12.06□□□□□ -0.48
NPIPB4-202ENST00000341400 MYSM1Q5VVJ2 828 aa12.05□□□□□ -0.48
NPIPB4-202ENST00000341400 RBM46Q8TBY0 533 aaKnown RBP12.04□□□□□ -0.48
NPIPB4-202ENST00000341400 PRSS12P56730 875 aa12.03□□□□□ -0.48
NPIPB4-202ENST00000341400 DIXDC1Q155Q3 683 aa12.03□□□□□ -0.48
NPIPB4-202ENST00000341400 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.03□□□□□ -0.48
NPIPB4-202ENST00000341400 CLK2P49760 499 aaKnown RBP12.02□□□□□ -0.49
NPIPB4-202ENST00000341400 ADAM33Q9BZ11 813 aa12.02□□□□□ -0.49
NPIPB4-202ENST00000341400 NUDT7P0C024 238 aa12.01□□□□□ -0.49
NPIPB4-202ENST00000341400 RAD21O60216 631 aa12□□□□□ -0.49
NPIPB4-202ENST00000341400 DOK7Q18PE1 504 aa12□□□□□ -0.49
NPIPB4-202ENST00000341400 PROSER2Q86WR7 435 aaPredicted RBP12□□□□□ -0.49
NPIPB4-202ENST00000341400 CDCA7LQ96GN5 454 aa12□□□□□ -0.49
NPIPB4-202ENST00000341400 TBC1D2Q9BYX2 928 aa12□□□□□ -0.49
NPIPB4-202ENST00000341400 PODXL2Q9NZ53 605 aa12□□□□□ -0.49
NPIPB4-202ENST00000341400 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.98□□□□□ -0.49
NPIPB4-202ENST00000341400 ARSIQ5FYB1 569 aa11.98□□□□□ -0.49
NPIPB4-202ENST00000341400 CCDC82Q8N4S0 544 aa11.98□□□□□ -0.49
NPIPB4-202ENST00000341400 SPDYE5A6NIY4 337 aa11.97□□□□□ -0.49
NPIPB4-202ENST00000341400 RIMBP2O15034 1052 aa11.97□□□□□ -0.49
NPIPB4-202ENST00000341400 KHSRPQ92945 711 aaKnown RBP eCLIP11.97□□□□□ -0.49
NPIPB4-202ENST00000341400 POTEHQ6S545 545 aa11.96□□□□□ -0.49
NPIPB4-202ENST00000341400 ZSWIM6Q9HCJ5 1215 aa11.96□□□□□ -0.49
NPIPB4-202ENST00000341400 BANK1Q8NDB2 785 aa11.95□□□□□ -0.5
NPIPB4-202ENST00000341400 POM121Q96HA1 1249 aa11.95□□□□□ -0.5
NPIPB4-202ENST00000341400 RFC5P40937 340 aa11.94□□□□□ -0.5
NPIPB4-202ENST00000341400 RCCD1A6NED2 376 aa11.93□□□□□ -0.5
NPIPB4-202ENST00000341400 HOXB3P14651 431 aaPredicted RBP11.93□□□□□ -0.5
NPIPB4-202ENST00000341400 FNBP4Q8N3X1 1017 aaPredicted RBP11.93□□□□□ -0.5
NPIPB4-202ENST00000341400 ZNF777Q9ULD5 760 aaPredicted RBP11.93□□□□□ -0.5
NPIPB4-202ENST00000341400 TMEM259Q4ZIN3 620 aa11.92□□□□□ -0.5
NPIPB4-202ENST00000341400 GPR153Q6NV75 609 aa11.92□□□□□ -0.5
NPIPB4-202ENST00000341400 TRIM26Q12899 539 aaPredicted RBP11.91□□□□□ -0.5
NPIPB4-202ENST00000341400 PPP4R3BQ5MIZ7 849 aa11.91□□□□□ -0.5
NPIPB4-202ENST00000341400 RIC3Q7Z5B4 369 aa11.91□□□□□ -0.5
NPIPB4-202ENST00000341400 SPIRE2Q8WWL2 714 aa11.91□□□□□ -0.5
NPIPB4-202ENST00000341400 FAM198AQ9UFP1 575 aa11.91□□□□□ -0.5
NPIPB4-202ENST00000341400 LIMD1Q9UGP4 676 aa11.91□□□□□ -0.5
NPIPB4-202ENST00000341400 CD46P15529 392 aa11.9□□□□□ -0.5
NPIPB4-202ENST00000341400 PPP2R2DQ66LE6 453 aa11.9□□□□□ -0.5
NPIPB4-202ENST00000341400 SULF1Q8IWU6 871 aa11.9□□□□□ -0.5
NPIPB4-202ENST00000341400 EYA1Q99502 592 aa11.9□□□□□ -0.5
NPIPB4-202ENST00000341400 COG6Q9Y2V7 657 aa11.9□□□□□ -0.5
NPIPB4-202ENST00000341400 PSDA5PKW4 1024 aaPredicted RBP11.89□□□□□ -0.51
NPIPB4-202ENST00000341400 COL9A1P20849 921 aa11.89□□□□□ -0.51
NPIPB4-202ENST00000341400 SNRKQ9NRH2 765 aa11.89□□□□□ -0.51
NPIPB4-202ENST00000341400 LHX6Q9UPM6 363 aa11.89□□□□□ -0.51
NPIPB4-202ENST00000341400 TUSC1Q2TAM9 212 aa11.88□□□□□ -0.51
NPIPB4-202ENST00000341400 NUTM1Q86Y26 1132 aa11.88□□□□□ -0.51
NPIPB4-202ENST00000341400 ZNF710Q8N1W2 664 aa11.88□□□□□ -0.51
NPIPB4-202ENST00000341400 BCL2L12Q9HB09 334 aa11.88□□□□□ -0.51
NPIPB4-202ENST00000341400 PPP1R3GB7ZBB8 358 aa11.87□□□□□ -0.51
NPIPB4-202ENST00000341400 CCDC97Q96F63 343 aaPredicted RBP11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms