RNA–Protein interactions for RNA: ENST00000341181.10

CLDND1-201, Transcript of claudin domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLDND1, Length 2,161 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-201ENST00000341181 REREQ9P2R6 1566 aa30.49■■■□□ 2.47
CLDND1-201ENST00000341181 PZPP20742 1482 aa30.48■■■□□ 2.47
CLDND1-201ENST00000341181 NUP155O75694 1391 aa30.48■■■□□ 2.47
CLDND1-201ENST00000341181 CCER1Q8TC90 406 aaPredicted RBP30.47■■■□□ 2.47
CLDND1-201ENST00000341181 GRWD1Q9BQ67 446 aaKnown RBP eCLIP30.47■■■□□ 2.47
CLDND1-201ENST00000341181 KDM5DQ9BY66 1539 aa30.46■■■□□ 2.47
CLDND1-201ENST00000341181 BCORL1Q5H9F3 1711 aa30.46■■■□□ 2.47
CLDND1-201ENST00000341181 RNF17Q9BXT8 1623 aaKnown RBP30.45■■■□□ 2.46
CLDND1-201ENST00000341181 PRDM15P57071 1507 aaPredicted RBP30.44■■■□□ 2.46
CLDND1-201ENST00000341181 FAM135AQ9P2D6 1515 aa30.42■■■□□ 2.46
CLDND1-201ENST00000341181 IQGAP3Q86VI3 1631 aa30.4■■■□□ 2.46
CLDND1-201ENST00000341181 MPHOSPH9Q99550 1183 aa30.4■■■□□ 2.46
CLDND1-201ENST00000341181 AGLP35573 1532 aa30.39■■■□□ 2.45
CLDND1-201ENST00000341181 GGT6Q6P531 493 aa30.38■■■□□ 2.45
CLDND1-201ENST00000341181 SLC4A1APQ9BWU0 796 aaKnown RBP30.38■■■□□ 2.45
CLDND1-201ENST00000341181 VWDEQ8N2E2 1590 aa30.37■■■□□ 2.45
CLDND1-201ENST00000341181 FOXD1Q16676 465 aa30.36■■■□□ 2.45
CLDND1-201ENST00000341181 ACIN1Q9UKV3 1341 aaKnown RBP30.34■■■□□ 2.45
CLDND1-201ENST00000341181 CEP152O94986 1710 aa30.3■■■□□ 2.44
CLDND1-201ENST00000341181 PKD2Q13563 968 aa30.29■■■□□ 2.44
CLDND1-201ENST00000341181 KANK1Q14678 1352 aa30.28■■■□□ 2.44
CLDND1-201ENST00000341181 MLECQ14165 292 aa30.28■■■□□ 2.44
CLDND1-201ENST00000341181 ARID4BQ4LE39 1312 aaPredicted RBP30.27■■■□□ 2.44
CLDND1-201ENST00000341181 ABCC3O15438 1527 aa30.26■■■□□ 2.44
CLDND1-201ENST00000341181 TET3O43151 1660 aa30.24■■■□□ 2.43
CLDND1-201ENST00000341181 LMTK2Q8IWU2 1503 aa30.22■■■□□ 2.43
CLDND1-201ENST00000341181 E9PCH4 1651 aa30.22■■■□□ 2.43
CLDND1-201ENST00000341181 WASHC2CQ9Y4E1 1318 aa30.22■■■□□ 2.43
CLDND1-201ENST00000341181 EFCAB6Q5THR3 1501 aa30.21■■■□□ 2.43
CLDND1-201ENST00000341181 ZC3H13Q5T200 1668 aaKnown RBP30.18■■■□□ 2.42
CLDND1-201ENST00000341181 CLSPNQ9HAW4 1339 aa30.18■■■□□ 2.42
CLDND1-201ENST00000341181 CAMSAP1Q5T5Y3 1602 aa30.17■■■□□ 2.42
CLDND1-201ENST00000341181 ANKRD30BQ9BXX2 1392 aa30.17■■■□□ 2.42
CLDND1-201ENST00000341181 SIN3AQ96ST3 1273 aa30.16■■■□□ 2.42
CLDND1-201ENST00000341181 CLTCQ00610 1675 aaKnown RBP30.15■■■□□ 2.42
CLDND1-201ENST00000341181 NPATQ14207 1427 aa30.13■■■□□ 2.41
CLDND1-201ENST00000341181 PLA2R1Q13018 1463 aa30.12■■■□□ 2.41
CLDND1-201ENST00000341181 NEUROD1Q13562 356 aa30.07■■■□□ 2.4
CLDND1-201ENST00000341181 PPP6R1Q9UPN7 881 aa30.07■■■□□ 2.4
CLDND1-201ENST00000341181 SPHKAPQ2M3C7 1700 aa30.05■■■□□ 2.4
CLDND1-201ENST00000341181 ZEB1P37275 1124 aaPredicted RBP30.05■■■□□ 2.4
CLDND1-201ENST00000341181 RPRD2Q5VT52 1461 aaKnown RBP30.04■■■□□ 2.4
CLDND1-201ENST00000341181 CFAP65Q6ZU64 1925 aaKnown RBP30.04■■■□□ 2.4
CLDND1-201ENST00000341181 ARHGAP31Q2M1Z3 1444 aa30.03■■■□□ 2.4
CLDND1-201ENST00000341181 FER1L4A9Z1Z3 1794 aa30.03■■■□□ 2.4
CLDND1-201ENST00000341181 PTPRTO14522 1441 aa30.02■■■□□ 2.4
CLDND1-201ENST00000341181 TRPM2O94759 1503 aa30.01■■■□□ 2.4
CLDND1-201ENST00000341181 UGGT1Q9NYU2 1555 aa30■■■□□ 2.39
CLDND1-201ENST00000341181 MADDQ8WXG6 1647 aa30■■■□□ 2.39
CLDND1-201ENST00000341181 ESF1Q9H501 851 aaKnown RBP29.99■■■□□ 2.39
CLDND1-201ENST00000341181 CCDC144AA2RUR9 1427 aa29.97■■■□□ 2.39
CLDND1-201ENST00000341181 ZMYM3Q14202 1370 aa29.97■■■□□ 2.39
CLDND1-201ENST00000341181 PREX1Q8TCU6 1659 aa29.96■■■□□ 2.39
CLDND1-201ENST00000341181 FBXO31Q5XUX0 539 aaPredicted RBP29.96■■■□□ 2.39
CLDND1-201ENST00000341181 ADAMTSL3P82987 1691 aa29.95■■■□□ 2.39
CLDND1-201ENST00000341181 CNTLNQ9NXG0 1405 aa29.95■■■□□ 2.39
CLDND1-201ENST00000341181 SYNMO15061 1565 aa29.95■■■□□ 2.39
CLDND1-201ENST00000341181 CLTCL1P53675 1640 aa29.95■■■□□ 2.39
CLDND1-201ENST00000341181 NOS1P29475 1434 aa29.95■■■□□ 2.38
CLDND1-201ENST00000341181 MROH2AA6NES4 1674 aa29.95■■■□□ 2.38
CLDND1-201ENST00000341181 ERVK-7P63135 1459 aa29.93■■■□□ 2.38
CLDND1-201ENST00000341181 RIMS1Q86UR5 1692 aaKnown RBP29.91■■■□□ 2.38
CLDND1-201ENST00000341181 C3P01024 1663 aa29.89■■■□□ 2.38
CLDND1-201ENST00000341181 CEBPAP49715 358 aaPredicted RBP29.88■■■□□ 2.37
CLDND1-201ENST00000341181 SPATA31D1Q6ZQQ2 1576 aa29.88■■■□□ 2.37
CLDND1-201ENST00000341181 TONSLQ96HA7 1378 aa29.85■■■□□ 2.37
CLDND1-201ENST00000341181 PIK3C2BO00750 1634 aa29.85■■■□□ 2.37
CLDND1-201ENST00000341181 PLPPR3Q6T4P5 718 aa29.84■■■□□ 2.37
CLDND1-201ENST00000341181 SPATA31E1Q6ZUB1 1445 aa29.8■■■□□ 2.36
CLDND1-201ENST00000341181 L3MBTL2Q969R5 705 aa29.79■■■□□ 2.36
CLDND1-201ENST00000341181 IDI1Q13907 227 aa29.77■■■□□ 2.36
CLDND1-201ENST00000341181 RGL3Q3MIN7 710 aa29.76■■■□□ 2.35
CLDND1-201ENST00000341181 ADGRB3O60242 1522 aa29.74■■■□□ 2.35
CLDND1-201ENST00000341181 KIF1BO60333 1816 aa29.74■■■□□ 2.35
CLDND1-201ENST00000341181 TNRQ92752 1358 aa29.74■■■□□ 2.35
CLDND1-201ENST00000341181 SLC52A1Q9NWF4 448 aa29.72■■■□□ 2.35
CLDND1-201ENST00000341181 TIMELESSQ9UNS1 1208 aa29.72■■■□□ 2.35
CLDND1-201ENST00000341181 PTPRMP28827 1452 aa29.71■■■□□ 2.35
CLDND1-201ENST00000341181 CHGAP10645 457 aaKnown RBP29.7■■■□□ 2.34
CLDND1-201ENST00000341181 TMEM131LA2VDJ0 1609 aa29.68■■■□□ 2.34
CLDND1-201ENST00000341181 NEURL4Q96JN8 1562 aa29.67■■■□□ 2.34
CLDND1-201ENST00000341181 MYO5BQ9ULV0 1848 aa29.67■■■□□ 2.34
CLDND1-201ENST00000341181 KDM4FA0A1W2PPD8 638 aa29.66■■■□□ 2.34
CLDND1-201ENST00000341181 PPP1R15AO75807 674 aaPredicted RBP29.65■■■□□ 2.34
CLDND1-201ENST00000341181 DCAF11Q8TEB1 546 aa29.64■■■□□ 2.34
CLDND1-201ENST00000341181 MYO3AQ8NEV4 1616 aa29.63■■■□□ 2.33
CLDND1-201ENST00000341181 KDM2AQ9Y2K7 1162 aa29.62■■■□□ 2.33
CLDND1-201ENST00000341181 ZNF326Q5BKZ1 582 aaKnown RBP29.6■■■□□ 2.33
CLDND1-201ENST00000341181 NLRP1Q9C000 1473 aa29.6■■■□□ 2.33
CLDND1-201ENST00000341181 A2ML1A8K2U0 1454 aa29.59■■■□□ 2.33
CLDND1-201ENST00000341181 IFT172Q9UG01 1749 aa29.59■■■□□ 2.33
CLDND1-201ENST00000341181 NBPF8Q3BBV2 869 aa29.57■■■□□ 2.32
CLDND1-201ENST00000341181 UBR1Q8IWV7 1749 aa29.57■■■□□ 2.32
CLDND1-201ENST00000341181 NEXMIFQ5QGS0 1516 aa29.56■■■□□ 2.32
CLDND1-201ENST00000341181 STAG3Q9UJ98 1225 aa29.56■■■□□ 2.32
CLDND1-201ENST00000341181 PPLO60437 1756 aa29.55■■■□□ 2.32
CLDND1-201ENST00000341181 NUTM2DQ5VT03 806 aaPredicted RBP29.52■■■□□ 2.32
CLDND1-201ENST00000341181 PRAG1Q86YV5 1406 aa29.52■■■□□ 2.32
CLDND1-201ENST00000341181 CEP170BQ9Y4F5 1589 aaPredicted RBP29.52■■■□□ 2.32
CLDND1-201ENST00000341181 UHRF1BP1Q6BDS2 1440 aa29.51■■■□□ 2.32
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms