RNA–Protein interactions for RNA: ENST00000340840.6

TRERF1-201, Transcript of transcriptional regulating factor 1, humanhuman

TSL 5 BASIC

Gene TRERF1, Length 4,174 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRERF1-201ENST00000340840 PRG4Q92954 1404 aaPredicted RBP12.35□□□□□ -0.43
TRERF1-201ENST00000340840 CDCA8Q53HL2 280 aa12.34□□□□□ -0.43
TRERF1-201ENST00000340840 KIAA0586Q9BVV6 1533 aa12.34□□□□□ -0.43
TRERF1-201ENST00000340840 SPATA31E1Q6ZUB1 1445 aa12.34□□□□□ -0.43
TRERF1-201ENST00000340840 DHX29Q7Z478 1369 aaKnown RBP12.33□□□□□ -0.44
TRERF1-201ENST00000340840 WDR62O43379 1518 aa12.33□□□□□ -0.44
TRERF1-201ENST00000340840 STAG3Q9UJ98 1225 aa12.33□□□□□ -0.44
TRERF1-201ENST00000340840 CAMSAP2Q08AD1 1489 aa12.32□□□□□ -0.44
TRERF1-201ENST00000340840 HNRNPMP52272 730 aaKnown RBP eCLIP12.32□□□□□ -0.44
TRERF1-201ENST00000340840 CCDC144AA2RUR9 1427 aa12.32□□□□□ -0.44
TRERF1-201ENST00000340840 RSPH4AQ5TD94 716 aa12.32□□□□□ -0.44
TRERF1-201ENST00000340840 KDM6BO15054 1643 aa12.31□□□□□ -0.44
TRERF1-201ENST00000340840 RNF123Q5XPI4 1314 aa12.31□□□□□ -0.44
TRERF1-201ENST00000340840 DNMT1P26358 1616 aaKnown RBP12.3□□□□□ -0.44
TRERF1-201ENST00000340840 DENND4BO75064 1496 aaPredicted RBP12.3□□□□□ -0.44
TRERF1-201ENST00000340840 C9orf84Q5VXU9 1444 aa12.29□□□□□ -0.44
TRERF1-201ENST00000340840 PLIN1O60240 522 aa12.29□□□□□ -0.44
TRERF1-201ENST00000340840 WASHC2CQ9Y4E1 1318 aa12.29□□□□□ -0.44
TRERF1-201ENST00000340840 CRBNQ96SW2 442 aa12.29□□□□□ -0.44
TRERF1-201ENST00000340840 PANK3Q9H999 370 aa12.29□□□□□ -0.44
TRERF1-201ENST00000340840 PZPP20742 1482 aa12.28□□□□□ -0.44
TRERF1-201ENST00000340840 BACH2Q9BYV9 841 aa12.28□□□□□ -0.44
TRERF1-201ENST00000340840 CHGAP10645 457 aaKnown RBP12.27□□□□□ -0.44
TRERF1-201ENST00000340840 RALGAPBQ86X10 1494 aa12.27□□□□□ -0.44
TRERF1-201ENST00000340840 NUP153P49790 1475 aaKnown RBP12.27□□□□□ -0.45
TRERF1-201ENST00000340840 RGS3P49796 1198 aa12.27□□□□□ -0.45
TRERF1-201ENST00000340840 CDCA7LQ96GN5 454 aa12.26□□□□□ -0.45
TRERF1-201ENST00000340840 UPF2Q9HAU5 1272 aaKnown RBP12.26□□□□□ -0.45
TRERF1-201ENST00000340840 CENPQQ7L2Z9 268 aaPredicted RBP12.26□□□□□ -0.45
TRERF1-201ENST00000340840 RTN4Q9NQC3 1192 aaKnown RBP12.26□□□□□ -0.45
TRERF1-201ENST00000340840 GPATCH8Q9UKJ3 1502 aaKnown RBP12.25□□□□□ -0.45
TRERF1-201ENST00000340840 GOLGA2Q08379 1002 aa12.25□□□□□ -0.45
TRERF1-201ENST00000340840 ADAMTS12P58397 1594 aa12.25□□□□□ -0.45
TRERF1-201ENST00000340840 RAPGEF6Q8TEU7 1601 aa12.24□□□□□ -0.45
TRERF1-201ENST00000340840 SENP3Q9H4L4 574 aaPredicted RBP12.23□□□□□ -0.45
TRERF1-201ENST00000340840 BECN1Q14457 450 aa12.23□□□□□ -0.45
TRERF1-201ENST00000340840 LRPPRCP42704 1394 aaKnown RBP12.23□□□□□ -0.45
TRERF1-201ENST00000340840 UHRF1BP1Q6BDS2 1440 aa12.22□□□□□ -0.45
TRERF1-201ENST00000340840 LRRIQ1Q96JM4 1722 aa12.22□□□□□ -0.45
TRERF1-201ENST00000340840 PLB1Q6P1J6 1458 aa12.22□□□□□ -0.45
TRERF1-201ENST00000340840 SYNJ2O15056 1496 aa12.22□□□□□ -0.45
TRERF1-201ENST00000340840 SLC24A1O60721 1099 aa12.22□□□□□ -0.45
TRERF1-201ENST00000340840 FAM161AQ3B820 660 aa12.22□□□□□ -0.45
TRERF1-201ENST00000340840 NBPF1Q3BBV0 1214 aa12.22□□□□□ -0.45
TRERF1-201ENST00000340840 ITSN2Q9NZM3 1697 aa12.21□□□□□ -0.45
TRERF1-201ENST00000340840 KIF14Q15058 1648 aa12.21□□□□□ -0.45
TRERF1-201ENST00000340840 GRIN2AQ12879 1464 aa12.21□□□□□ -0.45
TRERF1-201ENST00000340840 KIAA0556O60303 1618 aa12.21□□□□□ -0.46
TRERF1-201ENST00000340840 ARHGEF12Q9NZN5 1544 aa12.21□□□□□ -0.46
TRERF1-201ENST00000340840 ADGRL2O95490 1459 aa12.2□□□□□ -0.46
TRERF1-201ENST00000340840 MAGI1Q96QZ7 1491 aaPredicted RBP12.2□□□□□ -0.46
TRERF1-201ENST00000340840 GSE1Q14687 1217 aa12.18□□□□□ -0.46
TRERF1-201ENST00000340840 ADAMTS8Q9UP79 889 aa12.18□□□□□ -0.46
TRERF1-201ENST00000340840 TARBP1Q13395 1621 aaKnown RBP12.18□□□□□ -0.46
TRERF1-201ENST00000340840 PARD3Q8TEW0 1356 aa12.18□□□□□ -0.46
TRERF1-201ENST00000340840 DISP1Q96F81 1524 aa12.18□□□□□ -0.46
TRERF1-201ENST00000340840 PBRM1Q86U86 1689 aa12.18□□□□□ -0.46
TRERF1-201ENST00000340840 EFCAB2Q5VUJ9 269 aa12.18□□□□□ -0.46
TRERF1-201ENST00000340840 MBD5Q9P267 1494 aa12.17□□□□□ -0.46
TRERF1-201ENST00000340840 EIF5BO60841 1220 aaKnown RBP12.17□□□□□ -0.46
TRERF1-201ENST00000340840 PLEKHH2Q8IVE3 1493 aa12.16□□□□□ -0.46
TRERF1-201ENST00000340840 ERBINQ96RT1 1412 aa12.16□□□□□ -0.46
TRERF1-201ENST00000340840 SLC4A3P48751 1232 aa12.16□□□□□ -0.46
TRERF1-201ENST00000340840 EIF4G3O43432 1585 aaKnown RBP12.15□□□□□ -0.46
TRERF1-201ENST00000340840 GGT6Q6P531 493 aa12.15□□□□□ -0.46
TRERF1-201ENST00000340840 KDM5CP41229 1560 aa12.15□□□□□ -0.46
TRERF1-201ENST00000340840 EIF3AQ14152 1382 aaKnown RBP12.15□□□□□ -0.47
TRERF1-201ENST00000340840 NFKBIBQ15653 356 aa12.15□□□□□ -0.47
TRERF1-201ENST00000340840 CCDC146Q8IYE0 955 aa12.14□□□□□ -0.47
TRERF1-201ENST00000340840 SHANK2Q9UPX8 1470 aa12.14□□□□□ -0.47
TRERF1-201ENST00000340840 CCDC141Q6ZP82 1450 aa12.14□□□□□ -0.47
TRERF1-201ENST00000340840 PPP2R1AP30153 589 aa12.14□□□□□ -0.47
TRERF1-201ENST00000340840 FRAT1Q92837 279 aaPredicted RBP12.13□□□□□ -0.47
TRERF1-201ENST00000340840 ADGBQ8N7X0 1667 aa12.13□□□□□ -0.47
TRERF1-201ENST00000340840 E9PSI1 815 aa12.12□□□□□ -0.47
TRERF1-201ENST00000340840 NGEFQ8N5V2 710 aa12.12□□□□□ -0.47
TRERF1-201ENST00000340840 PRAG1Q86YV5 1406 aa12.12□□□□□ -0.47
TRERF1-201ENST00000340840 IL27Q8NEV9 243 aa12.12□□□□□ -0.47
TRERF1-201ENST00000340840 APAF1O14727 1248 aa12.11□□□□□ -0.47
TRERF1-201ENST00000340840 NEUROD2Q15784 382 aa12.11□□□□□ -0.47
TRERF1-201ENST00000340840 CFAP53Q96M91 514 aa12.11□□□□□ -0.47
TRERF1-201ENST00000340840 STAC3Q96MF2 364 aa12.11□□□□□ -0.47
TRERF1-201ENST00000340840 CGNL1Q0VF96 1302 aa12.11□□□□□ -0.47
TRERF1-201ENST00000340840 PER1O15534 1290 aaPredicted RBP12.11□□□□□ -0.47
TRERF1-201ENST00000340840 POLR1AO95602 1720 aaPredicted RBP12.11□□□□□ -0.47
TRERF1-201ENST00000340840 BCORL1Q5H9F3 1711 aa12.11□□□□□ -0.47
TRERF1-201ENST00000340840 CENPJQ9HC77 1338 aaPredicted RBP12.1□□□□□ -0.47
TRERF1-201ENST00000340840 MAPK8IP3Q9UPT6 1336 aa12.1□□□□□ -0.47
TRERF1-201ENST00000340840 KANK1Q14678 1352 aa12.1□□□□□ -0.47
TRERF1-201ENST00000340840 DISP3Q9P2K9 1392 aa12.09□□□□□ -0.47
TRERF1-201ENST00000340840 C20orf194Q5TEA3 1177 aa12.09□□□□□ -0.47
TRERF1-201ENST00000340840 INSRP06213 1382 aa12.09□□□□□ -0.47
TRERF1-201ENST00000340840 SKAP1Q86WV1 359 aa12.09□□□□□ -0.47
TRERF1-201ENST00000340840 PMFBP1Q8TBY8 1022 aa12.08□□□□□ -0.48
TRERF1-201ENST00000340840 ARHGAP5Q13017 1502 aa12.08□□□□□ -0.48
TRERF1-201ENST00000340840 MORC1Q86VD1 984 aa12.08□□□□□ -0.48
TRERF1-201ENST00000340840 TESK2Q96S53 571 aa12.08□□□□□ -0.48
TRERF1-201ENST00000340840 FAM135AQ9P2D6 1515 aa12.07□□□□□ -0.48
TRERF1-201ENST00000340840 ATP10BO94823 1461 aa12.07□□□□□ -0.48
TRERF1-201ENST00000340840 SPAG9O60271 1321 aaKnown RBP12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 8.9 ms