RNA–Protein interactions for RNA: ENST00000340473.7

GTF2F2-201, Transcript of general transcription factor IIF subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF2F2, Length 2,239 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2F2-201ENST00000340473 NUP155O75694 1391 aa19.69■□□□□ 0.74
GTF2F2-201ENST00000340473 KDM5DQ9BY66 1539 aa19.69■□□□□ 0.74
GTF2F2-201ENST00000340473 DEPDC5O75140 1603 aa19.68■□□□□ 0.74
GTF2F2-201ENST00000340473 MPHOSPH9Q99550 1183 aa19.67■□□□□ 0.74
GTF2F2-201ENST00000340473 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.67■□□□□ 0.74
GTF2F2-201ENST00000340473 BCORL1Q5H9F3 1711 aa19.67■□□□□ 0.74
GTF2F2-201ENST00000340473 REREQ9P2R6 1566 aa19.67■□□□□ 0.74
GTF2F2-201ENST00000340473 MROH1Q8NDA8 1641 aa19.66■□□□□ 0.74
GTF2F2-201ENST00000340473 SIGLEC1Q9BZZ2 1709 aa19.66■□□□□ 0.74
GTF2F2-201ENST00000340473 RNF17Q9BXT8 1623 aaKnown RBP19.65■□□□□ 0.74
GTF2F2-201ENST00000340473 FAM135AQ9P2D6 1515 aa19.65■□□□□ 0.74
GTF2F2-201ENST00000340473 IQGAP3Q86VI3 1631 aa19.64■□□□□ 0.73
GTF2F2-201ENST00000340473 PRDM15P57071 1507 aaPredicted RBP19.64■□□□□ 0.73
GTF2F2-201ENST00000340473 SLC4A1APQ9BWU0 796 aaKnown RBP19.64■□□□□ 0.73
GTF2F2-201ENST00000340473 VWDEQ8N2E2 1590 aa19.61■□□□□ 0.73
GTF2F2-201ENST00000340473 AGLP35573 1532 aa19.61■□□□□ 0.73
GTF2F2-201ENST00000340473 FOXD1Q16676 465 aa19.59■□□□□ 0.73
GTF2F2-201ENST00000340473 GGT6Q6P531 493 aa19.59■□□□□ 0.73
GTF2F2-201ENST00000340473 CLSPNQ9HAW4 1339 aa19.59■□□□□ 0.73
GTF2F2-201ENST00000340473 KANK1Q14678 1352 aa19.58■□□□□ 0.73
GTF2F2-201ENST00000340473 PKD2Q13563 968 aa19.57■□□□□ 0.72
GTF2F2-201ENST00000340473 CEP152O94986 1710 aa19.55■□□□□ 0.72
GTF2F2-201ENST00000340473 TET3O43151 1660 aa19.53■□□□□ 0.72
GTF2F2-201ENST00000340473 LMTK2Q8IWU2 1503 aa19.53■□□□□ 0.72
GTF2F2-201ENST00000340473 ABCC3O15438 1527 aa19.52■□□□□ 0.72
GTF2F2-201ENST00000340473 ANKRD30BQ9BXX2 1392 aa19.51■□□□□ 0.71
GTF2F2-201ENST00000340473 E9PCH4 1651 aa19.51■□□□□ 0.71
GTF2F2-201ENST00000340473 SIN3AQ96ST3 1273 aa19.51■□□□□ 0.71
GTF2F2-201ENST00000340473 ARID4BQ4LE39 1312 aaPredicted RBP19.5■□□□□ 0.71
GTF2F2-201ENST00000340473 WASHC2CQ9Y4E1 1318 aa19.5■□□□□ 0.71
GTF2F2-201ENST00000340473 MLECQ14165 292 aa19.5■□□□□ 0.71
GTF2F2-201ENST00000340473 EFCAB6Q5THR3 1501 aa19.49■□□□□ 0.71
GTF2F2-201ENST00000340473 ZC3H13Q5T200 1668 aaKnown RBP19.48■□□□□ 0.71
GTF2F2-201ENST00000340473 CAMSAP1Q5T5Y3 1602 aa19.47■□□□□ 0.71
GTF2F2-201ENST00000340473 NEUROD1Q13562 356 aa19.45■□□□□ 0.7
GTF2F2-201ENST00000340473 ZEB1P37275 1124 aaPredicted RBP19.45■□□□□ 0.7
GTF2F2-201ENST00000340473 PPP6R1Q9UPN7 881 aa19.45■□□□□ 0.7
GTF2F2-201ENST00000340473 PLA2R1Q13018 1463 aa19.45■□□□□ 0.7
GTF2F2-201ENST00000340473 CLTCQ00610 1675 aaKnown RBP19.43■□□□□ 0.7
GTF2F2-201ENST00000340473 NPATQ14207 1427 aa19.43■□□□□ 0.7
GTF2F2-201ENST00000340473 RPRD2Q5VT52 1461 aaKnown RBP19.41■□□□□ 0.7
GTF2F2-201ENST00000340473 SPHKAPQ2M3C7 1700 aa19.41■□□□□ 0.7
GTF2F2-201ENST00000340473 PTPRTO14522 1441 aa19.4■□□□□ 0.7
GTF2F2-201ENST00000340473 ARHGAP31Q2M1Z3 1444 aa19.4■□□□□ 0.7
GTF2F2-201ENST00000340473 TRPM2O94759 1503 aa19.38■□□□□ 0.69
GTF2F2-201ENST00000340473 CFAP65Q6ZU64 1925 aaKnown RBP19.37■□□□□ 0.69
GTF2F2-201ENST00000340473 CCDC144AA2RUR9 1427 aa19.37■□□□□ 0.69
GTF2F2-201ENST00000340473 ESF1Q9H501 851 aaKnown RBP19.36■□□□□ 0.69
GTF2F2-201ENST00000340473 FER1L4A9Z1Z3 1794 aa19.34■□□□□ 0.69
GTF2F2-201ENST00000340473 NOS1P29475 1434 aa19.33■□□□□ 0.69
GTF2F2-201ENST00000340473 CNTLNQ9NXG0 1405 aa19.33■□□□□ 0.69
GTF2F2-201ENST00000340473 CLTCL1P53675 1640 aa19.33■□□□□ 0.69
GTF2F2-201ENST00000340473 ZMYM3Q14202 1370 aa19.33■□□□□ 0.69
GTF2F2-201ENST00000340473 TONSLQ96HA7 1378 aa19.33■□□□□ 0.69
GTF2F2-201ENST00000340473 UGGT1Q9NYU2 1555 aa19.33■□□□□ 0.68
GTF2F2-201ENST00000340473 PREX1Q8TCU6 1659 aa19.33■□□□□ 0.68
GTF2F2-201ENST00000340473 MROH2AA6NES4 1674 aa19.32■□□□□ 0.68
GTF2F2-201ENST00000340473 SYNMO15061 1565 aa19.32■□□□□ 0.68
GTF2F2-201ENST00000340473 FBXO31Q5XUX0 539 aaPredicted RBP19.31■□□□□ 0.68
GTF2F2-201ENST00000340473 TIMELESSQ9UNS1 1208 aa19.31■□□□□ 0.68
GTF2F2-201ENST00000340473 ERVK-7P63135 1459 aa19.3■□□□□ 0.68
GTF2F2-201ENST00000340473 MADDQ8WXG6 1647 aa19.3■□□□□ 0.68
GTF2F2-201ENST00000340473 ADAMTSL3P82987 1691 aa19.29■□□□□ 0.68
GTF2F2-201ENST00000340473 SPATA31D1Q6ZQQ2 1576 aa19.28■□□□□ 0.68
GTF2F2-201ENST00000340473 PIK3C2BO00750 1634 aa19.27■□□□□ 0.67
GTF2F2-201ENST00000340473 L3MBTL2Q969R5 705 aa19.27■□□□□ 0.67
GTF2F2-201ENST00000340473 C3P01024 1663 aa19.26■□□□□ 0.67
GTF2F2-201ENST00000340473 RIMS1Q86UR5 1692 aaKnown RBP19.25■□□□□ 0.67
GTF2F2-201ENST00000340473 SPATA31E1Q6ZUB1 1445 aa19.25■□□□□ 0.67
GTF2F2-201ENST00000340473 CEBPAP49715 358 aaPredicted RBP19.24■□□□□ 0.67
GTF2F2-201ENST00000340473 RGL3Q3MIN7 710 aa19.23■□□□□ 0.67
GTF2F2-201ENST00000340473 KIF1BO60333 1816 aa19.22■□□□□ 0.67
GTF2F2-201ENST00000340473 PPP1R15AO75807 674 aaPredicted RBP19.22■□□□□ 0.67
GTF2F2-201ENST00000340473 IDI1Q13907 227 aa19.21■□□□□ 0.67
GTF2F2-201ENST00000340473 SLC52A1Q9NWF4 448 aa19.21■□□□□ 0.67
GTF2F2-201ENST00000340473 ADGRB3O60242 1522 aa19.2■□□□□ 0.66
GTF2F2-201ENST00000340473 PLPPR3Q6T4P5 718 aa19.2■□□□□ 0.66
GTF2F2-201ENST00000340473 NEURL4Q96JN8 1562 aa19.2■□□□□ 0.66
GTF2F2-201ENST00000340473 TNRQ92752 1358 aa19.18■□□□□ 0.66
GTF2F2-201ENST00000340473 CHGAP10645 457 aaKnown RBP19.17■□□□□ 0.66
GTF2F2-201ENST00000340473 DCAF11Q8TEB1 546 aa19.17■□□□□ 0.66
GTF2F2-201ENST00000340473 TMEM131LA2VDJ0 1609 aa19.15■□□□□ 0.66
GTF2F2-201ENST00000340473 KDM2AQ9Y2K7 1162 aa19.15■□□□□ 0.66
GTF2F2-201ENST00000340473 MYO5BQ9ULV0 1848 aa19.14■□□□□ 0.65
GTF2F2-201ENST00000340473 NBPF8Q3BBV2 869 aa19.13■□□□□ 0.65
GTF2F2-201ENST00000340473 PTPRMP28827 1452 aa19.12■□□□□ 0.65
GTF2F2-201ENST00000340473 ZNF326Q5BKZ1 582 aaKnown RBP19.12■□□□□ 0.65
GTF2F2-201ENST00000340473 IFT172Q9UG01 1749 aa19.11■□□□□ 0.65
GTF2F2-201ENST00000340473 UHRF1BP1Q6BDS2 1440 aa19.1■□□□□ 0.65
GTF2F2-201ENST00000340473 NLRP1Q9C000 1473 aa19.1■□□□□ 0.65
GTF2F2-201ENST00000340473 A2ML1A8K2U0 1454 aa19.09■□□□□ 0.65
GTF2F2-201ENST00000340473 STAG3Q9UJ98 1225 aa19.09■□□□□ 0.65
GTF2F2-201ENST00000340473 PPLO60437 1756 aa19.09■□□□□ 0.65
GTF2F2-201ENST00000340473 MYO3AQ8NEV4 1616 aa19.09■□□□□ 0.65
GTF2F2-201ENST00000340473 PRAG1Q86YV5 1406 aa19.08■□□□□ 0.64
GTF2F2-201ENST00000340473 NEXMIFQ5QGS0 1516 aa19.07■□□□□ 0.64
GTF2F2-201ENST00000340473 UBR1Q8IWV7 1749 aa19.07■□□□□ 0.64
GTF2F2-201ENST00000340473 RPGRIP1LQ68CZ1 1315 aa19.07■□□□□ 0.64
GTF2F2-201ENST00000340473 KDM4FA0A1W2PPD8 638 aa19.06■□□□□ 0.64
GTF2F2-201ENST00000340473 MYOM2P54296 1465 aa19.06■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms