RNA–Protein interactions for RNA: ENST00000340342.10

CTSL-201, Transcript of cathepsin L, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTSL, Length 1,436 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSL-201ENST00000340342 NCOA1Q15788 1441 aa21.69■■□□□ 1.06
CTSL-201ENST00000340342 DUOX2Q9NRD8 1548 aa21.69■■□□□ 1.06
CTSL-201ENST00000340342 C3P01024 1663 aa21.66■■□□□ 1.06
CTSL-201ENST00000340342 EIF2AK4Q9P2K8 1649 aaKnown RBP21.66■■□□□ 1.06
CTSL-201ENST00000340342 MROH2AA6NES4 1674 aa21.65■■□□□ 1.06
CTSL-201ENST00000340342 ZMYM3Q14202 1370 aa21.65■■□□□ 1.06
CTSL-201ENST00000340342 LMTK3Q96Q04 1460 aa21.62■■□□□ 1.05
CTSL-201ENST00000340342 RNF17Q9BXT8 1623 aaKnown RBP21.62■■□□□ 1.05
CTSL-201ENST00000340342 CLTCQ00610 1675 aaKnown RBP21.62■■□□□ 1.05
CTSL-201ENST00000340342 ERBINQ96RT1 1412 aa21.62■■□□□ 1.05
CTSL-201ENST00000340342 ROCK1Q13464 1354 aa21.6■■□□□ 1.05
CTSL-201ENST00000340342 MROH1Q8NDA8 1641 aa21.59■■□□□ 1.05
CTSL-201ENST00000340342 PREX1Q8TCU6 1659 aa21.58■■□□□ 1.05
CTSL-201ENST00000340342 WASHC2CQ9Y4E1 1318 aa21.58■■□□□ 1.04
CTSL-201ENST00000340342 FAM135AQ9P2D6 1515 aa21.57■■□□□ 1.04
CTSL-201ENST00000340342 NPATQ14207 1427 aa21.57■■□□□ 1.04
CTSL-201ENST00000340342 DEPDC5O75140 1603 aa21.56■■□□□ 1.04
CTSL-201ENST00000340342 ANKRD50Q9ULJ7 1429 aa21.55■■□□□ 1.04
CTSL-201ENST00000340342 UHRF1BP1Q6BDS2 1440 aa21.54■■□□□ 1.04
CTSL-201ENST00000340342 CEP152O94986 1710 aa21.54■■□□□ 1.04
CTSL-201ENST00000340342 KDM5DQ9BY66 1539 aa21.54■■□□□ 1.04
CTSL-201ENST00000340342 PRDM15P57071 1507 aaPredicted RBP21.53■■□□□ 1.04
CTSL-201ENST00000340342 HSPA2P54652 639 aa21.52■■□□□ 1.04
CTSL-201ENST00000340342 GCC2Q8IWJ2 1684 aa21.51■■□□□ 1.03
CTSL-201ENST00000340342 ZC3H13Q5T200 1668 aaKnown RBP21.5■■□□□ 1.03
CTSL-201ENST00000340342 ABCC3O15438 1527 aa21.49■■□□□ 1.03
CTSL-201ENST00000340342 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.49■■□□□ 1.032e-7■■■□□ 16.6
CTSL-201ENST00000340342 NAIPQ13075 1403 aa21.48■■□□□ 1.03
CTSL-201ENST00000340342 UNC13BO14795 1591 aa21.46■■□□□ 1.03
CTSL-201ENST00000340342 HFM1A2PYH4 1435 aa21.45■■□□□ 1.03
CTSL-201ENST00000340342 PZPP20742 1482 aa21.45■■□□□ 1.03
CTSL-201ENST00000340342 CAMSAP1Q5T5Y3 1602 aa21.45■■□□□ 1.02
CTSL-201ENST00000340342 CFAP65Q6ZU64 1925 aaKnown RBP21.45■■□□□ 1.02
CTSL-201ENST00000340342 VWDEQ8N2E2 1590 aa21.45■■□□□ 1.02
CTSL-201ENST00000340342 FBXO31Q5XUX0 539 aaPredicted RBP21.44■■□□□ 1.02
CTSL-201ENST00000340342 KANK1Q14678 1352 aa21.43■■□□□ 1.02
CTSL-201ENST00000340342 TNRQ92752 1358 aa21.39■■□□□ 1.01
CTSL-201ENST00000340342 DMRT2Q9Y5R5 561 aa21.38■■□□□ 1.01
CTSL-201ENST00000340342 MYO3AQ8NEV4 1616 aa21.38■■□□□ 1.01
CTSL-201ENST00000340342 LMTK2Q8IWU2 1503 aa21.38■■□□□ 1.01
CTSL-201ENST00000340342 IQGAP3Q86VI3 1631 aa21.38■■□□□ 1.01
CTSL-201ENST00000340342 ZNF142P52746 1687 aaPredicted RBP21.37■■□□□ 1.01
CTSL-201ENST00000340342 STRCQ7RTU9 1775 aa21.36■■□□□ 1.01
CTSL-201ENST00000340342 ARHGAP31Q2M1Z3 1444 aa21.36■■□□□ 1.01
CTSL-201ENST00000340342 EFCAB6Q5THR3 1501 aa21.36■■□□□ 1.01
CTSL-201ENST00000340342 CEP170BQ9Y4F5 1589 aaPredicted RBP21.35■■□□□ 1.01
CTSL-201ENST00000340342 TET3O43151 1660 aa21.35■■□□□ 1.01
CTSL-201ENST00000340342 NUP155O75694 1391 aa21.34■■□□□ 1.01
CTSL-201ENST00000340342 A2ML1A8K2U0 1454 aa21.34■■□□□ 1.01
CTSL-201ENST00000340342 SPATA31D1Q6ZQQ2 1576 aa21.32■■□□□ 1
CTSL-201ENST00000340342 NLRP1Q9C000 1473 aa21.32■■□□□ 1
CTSL-201ENST00000340342 ERVK-7P63135 1459 aa21.32■■□□□ 1
CTSL-201ENST00000340342 E9PCH4 1651 aa21.3■■□□□ 1
CTSL-201ENST00000340342 THEMISQ8N1K5 641 aaPredicted RBP21.29■■□□□ 1
CTSL-201ENST00000340342 SETD5Q9C0A6 1442 aa21.29■■□□□ 1
CTSL-201ENST00000340342 PKD2Q13563 968 aa21.29■■□□□ 1
CTSL-201ENST00000340342 PLA2R1Q13018 1463 aa21.28■■□□□ 1
CTSL-201ENST00000340342 PTPRTO14522 1441 aa21.27■■□□□ 1
CTSL-201ENST00000340342 TRIM52Q96A61 297 aa21.27■■□□□ 1
CTSL-201ENST00000340342 RAB3GAP2Q9H2M9 1393 aa21.25■□□□□ 0.99
CTSL-201ENST00000340342 SYNMO15061 1565 aa21.24■□□□□ 0.99
CTSL-201ENST00000340342 UGGT1Q9NYU2 1555 aa21.24■□□□□ 0.99
CTSL-201ENST00000340342 NCKAP5LQ9HCH0 1330 aa21.24■□□□□ 0.99
CTSL-201ENST00000340342 RPRD2Q5VT52 1461 aaKnown RBP21.24■□□□□ 0.99
CTSL-201ENST00000340342 NOS1P29475 1434 aa21.21■□□□□ 0.99
CTSL-201ENST00000340342 ANKLE2Q86XL3 938 aa21.21■□□□□ 0.99
CTSL-201ENST00000340342 SPHKAPQ2M3C7 1700 aa21.19■□□□□ 0.98
CTSL-201ENST00000340342 SLC52A1Q9NWF4 448 aa21.18■□□□□ 0.98
CTSL-201ENST00000340342 PIK3C2BO00750 1634 aa21.17■□□□□ 0.98
CTSL-201ENST00000340342 TRIM26Q12899 539 aaPredicted RBP21.17■□□□□ 0.98
CTSL-201ENST00000340342 IDI1Q13907 227 aa21.17■□□□□ 0.98
CTSL-201ENST00000340342 UBR1Q8IWV7 1749 aa21.16■□□□□ 0.98
CTSL-201ENST00000340342 SLC4A1APQ9BWU0 796 aaKnown RBP21.16■□□□□ 0.98
CTSL-201ENST00000340342 POLR1AO95602 1720 aaPredicted RBP21.15■□□□□ 0.98
CTSL-201ENST00000340342 STAG3Q9UJ98 1225 aa21.14■□□□□ 0.98
CTSL-201ENST00000340342 KDM5AP29375 1690 aaKnown RBP21.13■□□□□ 0.97
CTSL-201ENST00000340342 MYO5BQ9ULV0 1848 aa21.13■□□□□ 0.97
CTSL-201ENST00000340342 FOXD1Q16676 465 aa21.12■□□□□ 0.97
CTSL-201ENST00000340342 CERKQ8TCT0 537 aa21.11■□□□□ 0.97
CTSL-201ENST00000340342 MPHOSPH9Q99550 1183 aa21.11■□□□□ 0.97
CTSL-201ENST00000340342 MED14O60244 1454 aa21.1■□□□□ 0.97
CTSL-201ENST00000340342 NEURL4Q96JN8 1562 aa21.08■□□□□ 0.97
CTSL-201ENST00000340342 ADGRB3O60242 1522 aa21.08■□□□□ 0.97
CTSL-201ENST00000340342 SLIT1O75093 1534 aa21.08■□□□□ 0.97
CTSL-201ENST00000340342 TRPM2O94759 1503 aa21.08■□□□□ 0.97
CTSL-201ENST00000340342 EID1Q9Y6B2 187 aa21.08■□□□□ 0.97
CTSL-201ENST00000340342 ARHGAP23Q9P227 1491 aa21.08■□□□□ 0.96
CTSL-201ENST00000340342 CLTCL1P53675 1640 aa21.07■□□□□ 0.96
CTSL-201ENST00000340342 TXNDC2Q86VQ3 553 aa21.07■□□□□ 0.96
CTSL-201ENST00000340342 ACIN1Q9UKV3 1341 aaKnown RBP21.07■□□□□ 0.96
CTSL-201ENST00000340342 TMEM2Q9UHN6 1383 aa21.07■□□□□ 0.96
CTSL-201ENST00000340342 NPHP4O75161 1426 aaPredicted RBP21.06■□□□□ 0.96
CTSL-201ENST00000340342 HRCP23327 699 aa21.06■□□□□ 0.96
CTSL-201ENST00000340342 TMEM131LA2VDJ0 1609 aa21.05■□□□□ 0.96
CTSL-201ENST00000340342 ILDR1Q86SU0 546 aaPredicted RBP21.05■□□□□ 0.96
CTSL-201ENST00000340342 LTKP29376 864 aa21.04■□□□□ 0.96
CTSL-201ENST00000340342 FBXO41Q8TF61 875 aa21.04■□□□□ 0.96
CTSL-201ENST00000340342 SCAF11Q99590 1463 aaKnown RBP21.04■□□□□ 0.96
CTSL-201ENST00000340342 LTBP4Q8N2S1 1624 aa21.03■□□□□ 0.96
CTSL-201ENST00000340342 ZNF335Q9H4Z2 1342 aaPredicted RBP21.03■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms