RNA–Protein interactions for RNA: ENST00000340192.11

ERCC1-203, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 1 (best) BASIC

Gene ERCC1, Length 949 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-203ENST00000340192 NPATQ14207 1427 aa22.62■■□□□ 1.21
ERCC1-203ENST00000340192 KDM5DQ9BY66 1539 aa22.61■■□□□ 1.21
ERCC1-203ENST00000340192 FAM135AQ9P2D6 1515 aa22.61■■□□□ 1.21
ERCC1-203ENST00000340192 FAM50AQ14320 339 aaKnown RBP22.59■■□□□ 1.21
ERCC1-203ENST00000340192 KIF15Q9NS87 1388 aa22.59■■□□□ 1.21
ERCC1-203ENST00000340192 PPARGC1BQ86YN6 1023 aaKnown RBP22.58■■□□□ 1.21
ERCC1-203ENST00000340192 PTPRKQ15262 1439 aa22.57■■□□□ 1.2
ERCC1-203ENST00000340192 RRP7BPQ9NSQ0 103 aa22.57■■□□□ 1.2
ERCC1-203ENST00000340192 WASHC2CQ9Y4E1 1318 aa22.57■■□□□ 1.2
ERCC1-203ENST00000340192 CHIC2Q9UKJ5 165 aa22.56■■□□□ 1.2
ERCC1-203ENST00000340192 MROH1Q8NDA8 1641 aa22.55■■□□□ 1.2
ERCC1-203ENST00000340192 MYO3AQ8NEV4 1616 aa22.54■■□□□ 1.2
ERCC1-203ENST00000340192 ZC3H13Q5T200 1668 aaKnown RBP22.54■■□□□ 1.2
ERCC1-203ENST00000340192 ERBINQ96RT1 1412 aa22.54■■□□□ 1.2
ERCC1-203ENST00000340192 ANKRD30AQ9BXX3 1397 aa22.53■■□□□ 1.2
ERCC1-203ENST00000340192 STRCQ7RTU9 1775 aa22.53■■□□□ 1.2
ERCC1-203ENST00000340192 ABCC3O15438 1527 aa22.52■■□□□ 1.19
ERCC1-203ENST00000340192 NCOA1Q15788 1441 aa22.51■■□□□ 1.19
ERCC1-203ENST00000340192 ADGRL2O95490 1459 aa22.51■■□□□ 1.19
ERCC1-203ENST00000340192 PZPP20742 1482 aa22.51■■□□□ 1.19
ERCC1-203ENST00000340192 ZNF142P52746 1687 aaPredicted RBP22.51■■□□□ 1.19
ERCC1-203ENST00000340192 CEP152O94986 1710 aa22.51■■□□□ 1.19
ERCC1-203ENST00000340192 DEPDC5O75140 1603 aa22.49■■□□□ 1.19
ERCC1-203ENST00000340192 PRDM15P57071 1507 aaPredicted RBP22.48■■□□□ 1.19
ERCC1-203ENST00000340192 CEP170BQ9Y4F5 1589 aaPredicted RBP22.47■■□□□ 1.19
ERCC1-203ENST00000340192 CAMSAP1Q5T5Y3 1602 aa22.46■■□□□ 1.19
ERCC1-203ENST00000340192 FBXO31Q5XUX0 539 aaPredicted RBP22.46■■□□□ 1.19
ERCC1-203ENST00000340192 TNRQ92752 1358 aa22.43■■□□□ 1.18
ERCC1-203ENST00000340192 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.41■■□□□ 1.185e-7■■□□□ 12.5
ERCC1-203ENST00000340192 CFAP65Q6ZU64 1925 aaKnown RBP22.41■■□□□ 1.18
ERCC1-203ENST00000340192 A2ML1A8K2U0 1454 aa22.41■■□□□ 1.18
ERCC1-203ENST00000340192 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.4■■□□□ 1.187e-7■■■■■ 52.8
ERCC1-203ENST00000340192 SPATA31D1Q6ZQQ2 1576 aa22.38■■□□□ 1.17
ERCC1-203ENST00000340192 DMRT2Q9Y5R5 561 aa22.38■■□□□ 1.17
ERCC1-203ENST00000340192 ANKRD50Q9ULJ7 1429 aa22.38■■□□□ 1.17
ERCC1-203ENST00000340192 KANK1Q14678 1352 aa22.38■■□□□ 1.17
ERCC1-203ENST00000340192 VWDEQ8N2E2 1590 aa22.37■■□□□ 1.17
ERCC1-203ENST00000340192 ERVK-7P63135 1459 aa22.36■■□□□ 1.17
ERCC1-203ENST00000340192 ITGAEP38570 1179 aa22.36■■□□□ 1.17
ERCC1-203ENST00000340192 ROCK1Q13464 1354 aa22.36■■□□□ 1.17
ERCC1-203ENST00000340192 NLRP1Q9C000 1473 aa22.35■■□□□ 1.17
ERCC1-203ENST00000340192 RRBP1Q9P2E9 1410 aaKnown RBP22.35■■□□□ 1.17
ERCC1-203ENST00000340192 PLA2R1Q13018 1463 aa22.34■■□□□ 1.17
ERCC1-203ENST00000340192 ARHGAP31Q2M1Z3 1444 aa22.34■■□□□ 1.17
ERCC1-203ENST00000340192 PTPRTO14522 1441 aa22.33■■□□□ 1.17
ERCC1-203ENST00000340192 LMTK2Q8IWU2 1503 aa22.33■■□□□ 1.17
ERCC1-203ENST00000340192 NCKAP5LQ9HCH0 1330 aa22.31■■□□□ 1.16
ERCC1-203ENST00000340192 UGGT1Q9NYU2 1555 aa22.3■■□□□ 1.16
ERCC1-203ENST00000340192 UNC13BO14795 1591 aa22.29■■□□□ 1.16
ERCC1-203ENST00000340192 POLR1AO95602 1720 aaPredicted RBP22.29■■□□□ 1.16
ERCC1-203ENST00000340192 EFCAB6Q5THR3 1501 aa22.29■■□□□ 1.16
ERCC1-203ENST00000340192 PKD2Q13563 968 aa22.27■■□□□ 1.16
ERCC1-203ENST00000340192 ILDR1Q86SU0 546 aaPredicted RBP22.27■■□□□ 1.16
ERCC1-203ENST00000340192 UBR1Q8IWV7 1749 aa22.25■■□□□ 1.15
ERCC1-203ENST00000340192 TET3O43151 1660 aa22.24■■□□□ 1.15
ERCC1-203ENST00000340192 THEMISQ8N1K5 641 aaPredicted RBP22.24■■□□□ 1.15
ERCC1-203ENST00000340192 GCC2Q8IWJ2 1684 aa22.23■■□□□ 1.15
ERCC1-203ENST00000340192 NEURL4Q96JN8 1562 aa22.22■■□□□ 1.15
ERCC1-203ENST00000340192 SYNMO15061 1565 aa22.21■■□□□ 1.15
ERCC1-203ENST00000340192 PIK3C2BO00750 1634 aa22.2■■□□□ 1.15
ERCC1-203ENST00000340192 IQGAP3Q86VI3 1631 aa22.2■■□□□ 1.15
ERCC1-203ENST00000340192 CERKQ8TCT0 537 aa22.2■■□□□ 1.14
ERCC1-203ENST00000340192 RPRD2Q5VT52 1461 aaKnown RBP22.19■■□□□ 1.14
ERCC1-203ENST00000340192 ANKLE2Q86XL3 938 aa22.18■■□□□ 1.14
ERCC1-203ENST00000340192 LTBP4Q8N2S1 1624 aa22.17■■□□□ 1.14
ERCC1-203ENST00000340192 NOS1P29475 1434 aa22.17■■□□□ 1.14
ERCC1-203ENST00000340192 FBXO41Q8TF61 875 aa22.17■■□□□ 1.14
ERCC1-203ENST00000340192 E9PCH4 1651 aa22.17■■□□□ 1.14
ERCC1-203ENST00000340192 KDM5AP29375 1690 aaKnown RBP22.16■■□□□ 1.14
ERCC1-203ENST00000340192 NUP155O75694 1391 aa22.14■■□□□ 1.14
ERCC1-203ENST00000340192 MED14O60244 1454 aa22.14■■□□□ 1.13
ERCC1-203ENST00000340192 NAIPQ13075 1403 aa22.14■■□□□ 1.13
ERCC1-203ENST00000340192 IQGAP1P46940 1657 aa22.14■■□□□ 1.13
ERCC1-203ENST00000340192 ZNF335Q9H4Z2 1342 aaPredicted RBP22.12■■□□□ 1.13
ERCC1-203ENST00000340192 IDI1Q13907 227 aa22.12■■□□□ 1.13
ERCC1-203ENST00000340192 SLIT1O75093 1534 aa22.11■■□□□ 1.13
ERCC1-203ENST00000340192 ARHGAP23Q9P227 1491 aa22.11■■□□□ 1.13
ERCC1-203ENST00000340192 NPHP4O75161 1426 aaPredicted RBP22.11■■□□□ 1.13
ERCC1-203ENST00000340192 HFM1A2PYH4 1435 aa22.09■■□□□ 1.13
ERCC1-203ENST00000340192 SLC52A1Q9NWF4 448 aa22.09■■□□□ 1.13
ERCC1-203ENST00000340192 STAG3Q9UJ98 1225 aa22.09■■□□□ 1.13
ERCC1-203ENST00000340192 ADGRB3O60242 1522 aa22.09■■□□□ 1.13
ERCC1-203ENST00000340192 SCAF11Q99590 1463 aaKnown RBP22.08■■□□□ 1.12
ERCC1-203ENST00000340192 MYO5BQ9ULV0 1848 aa22.07■■□□□ 1.12
ERCC1-203ENST00000340192 TMEM2Q9UHN6 1383 aa22.06■■□□□ 1.12
ERCC1-203ENST00000340192 LTKP29376 864 aa22.05■■□□□ 1.12
ERCC1-203ENST00000340192 TXNDC2Q86VQ3 553 aa22.04■■□□□ 1.12
ERCC1-203ENST00000340192 EID1Q9Y6B2 187 aa22.03■■□□□ 1.12
ERCC1-203ENST00000340192 IQSEC2Q5JU85 1478 aa22.03■■□□□ 1.12
ERCC1-203ENST00000340192 TMEM131LA2VDJ0 1609 aa22.02■■□□□ 1.12
ERCC1-203ENST00000340192 SPHKAPQ2M3C7 1700 aa22.02■■□□□ 1.12
ERCC1-203ENST00000340192 CPS1P31327 1500 aa21.98■■□□□ 1.11
ERCC1-203ENST00000340192 STRCP1A6NGW2 1772 aa21.97■■□□□ 1.11
ERCC1-203ENST00000340192 TRIM52Q96A61 297 aa21.96■■□□□ 1.11
ERCC1-203ENST00000340192 CHGAP10645 457 aaKnown RBP21.94■■□□□ 1.1
ERCC1-203ENST00000340192 ZFYVE9O95405 1425 aa21.94■■□□□ 1.1
ERCC1-203ENST00000340192 RIMS2Q9UQ26 1411 aa21.92■■□□□ 1.1
ERCC1-203ENST00000340192 TRPM2O94759 1503 aa21.9■■□□□ 1.1
ERCC1-203ENST00000340192 CLTCL1P53675 1640 aa21.89■■□□□ 1.09
ERCC1-203ENST00000340192 SLC4A1APQ9BWU0 796 aaKnown RBP21.88■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms