RNA–Protein interactions for RNA: ENST00000337620.8

CBX3-201, Transcript of chromobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX3, Length 2,128 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-201ENST00000337620 FAM135AQ9P2D6 1515 aa21.3■■□□□ 1
CBX3-201ENST00000337620 A2MP01023 1474 aa21.3■■□□□ 1
CBX3-201ENST00000337620 FRMPD1Q5SYB0 1578 aa21.29■■□□□ 1
CBX3-201ENST00000337620 ANKRD30BQ9BXX2 1392 aa21.29■■□□□ 1
CBX3-201ENST00000337620 ABCA6Q8N139 1617 aa21.28■■□□□ 1
CBX3-201ENST00000337620 MAGI2Q86UL8 1455 aa21.26■□□□□ 0.99
CBX3-201ENST00000337620 TIMELESSQ9UNS1 1208 aa21.26■□□□□ 0.99
CBX3-201ENST00000337620 IQGAP3Q86VI3 1631 aa21.25■□□□□ 0.99
CBX3-201ENST00000337620 EIF2AK4Q9P2K8 1649 aaKnown RBP21.25■□□□□ 0.99
CBX3-201ENST00000337620 YEATS2Q9ULM3 1422 aa21.25■□□□□ 0.99
CBX3-201ENST00000337620 TONSLQ96HA7 1378 aa21.25■□□□□ 0.99
CBX3-201ENST00000337620 DIP2CQ9Y2E4 1556 aa21.24■□□□□ 0.99
CBX3-201ENST00000337620 COL17A1Q9UMD9 1497 aaPredicted RBP21.23■□□□□ 0.99
CBX3-201ENST00000337620 ZMYM4Q5VZL5 1548 aa21.23■□□□□ 0.99
CBX3-201ENST00000337620 KANK1Q14678 1352 aa21.22■□□□□ 0.99
CBX3-201ENST00000337620 DEPDC5O75140 1603 aa21.22■□□□□ 0.99
CBX3-201ENST00000337620 GGT6Q6P531 493 aa21.19■□□□□ 0.98
CBX3-201ENST00000337620 RPRD2Q5VT52 1461 aaKnown RBP21.17■□□□□ 0.98
CBX3-201ENST00000337620 PRDM15P57071 1507 aaPredicted RBP21.16■□□□□ 0.98
CBX3-201ENST00000337620 MROH1Q8NDA8 1641 aa21.16■□□□□ 0.98
CBX3-201ENST00000337620 PPP1R15AO75807 674 aaPredicted RBP21.16■□□□□ 0.98
CBX3-201ENST00000337620 ATP10AO60312 1499 aa21.15■□□□□ 0.98
CBX3-201ENST00000337620 RNF17Q9BXT8 1623 aaKnown RBP21.14■□□□□ 0.98
CBX3-201ENST00000337620 VWDEQ8N2E2 1590 aa21.14■□□□□ 0.97
CBX3-201ENST00000337620 BCORL1Q5H9F3 1711 aa21.12■□□□□ 0.97
CBX3-201ENST00000337620 L3MBTL2Q969R5 705 aa21.11■□□□□ 0.97
CBX3-201ENST00000337620 TET3O43151 1660 aa21.1■□□□□ 0.97
CBX3-201ENST00000337620 E9PCH4 1651 aa21.09■□□□□ 0.97
CBX3-201ENST00000337620 WASHC2CQ9Y4E1 1318 aa21.09■□□□□ 0.97
CBX3-201ENST00000337620 PLA2R1Q13018 1463 aa21.09■□□□□ 0.97
CBX3-201ENST00000337620 CCDC144AA2RUR9 1427 aa21.08■□□□□ 0.96
CBX3-201ENST00000337620 CEP152O94986 1710 aa21.07■□□□□ 0.96
CBX3-201ENST00000337620 ARHGEF40Q8TER5 1519 aa21.06■□□□□ 0.96
CBX3-201ENST00000337620 LMTK2Q8IWU2 1503 aa21.05■□□□□ 0.96
CBX3-201ENST00000337620 REREQ9P2R6 1566 aa21.05■□□□□ 0.96
CBX3-201ENST00000337620 ZNF316A6NFI3 1004 aaPredicted RBP21.03■□□□□ 0.96
CBX3-201ENST00000337620 EFCAB6Q5THR3 1501 aa21.03■□□□□ 0.96
CBX3-201ENST00000337620 ABCC3O15438 1527 aa21.02■□□□□ 0.96
CBX3-201ENST00000337620 AGLP35573 1532 aa21.01■□□□□ 0.95
CBX3-201ENST00000337620 PTPRTO14522 1441 aa21■□□□□ 0.95
CBX3-201ENST00000337620 SPHKAPQ2M3C7 1700 aa20.99■□□□□ 0.95
CBX3-201ENST00000337620 MLECQ14165 292 aa20.99■□□□□ 0.95
CBX3-201ENST00000337620 SIGLEC1Q9BZZ2 1709 aa20.99■□□□□ 0.95
CBX3-201ENST00000337620 RGL3Q3MIN7 710 aa20.98■□□□□ 0.95
CBX3-201ENST00000337620 TRPM2O94759 1503 aa20.98■□□□□ 0.95
CBX3-201ENST00000337620 ARID4BQ4LE39 1312 aaPredicted RBP20.97■□□□□ 0.95
CBX3-201ENST00000337620 NPATQ14207 1427 aa20.97■□□□□ 0.95
CBX3-201ENST00000337620 CAMSAP1Q5T5Y3 1602 aa20.95■□□□□ 0.94
CBX3-201ENST00000337620 ZC3H13Q5T200 1668 aaKnown RBP20.95■□□□□ 0.94
CBX3-201ENST00000337620 DCAF11Q8TEB1 546 aa20.95■□□□□ 0.94
CBX3-201ENST00000337620 KDM2AQ9Y2K7 1162 aa20.95■□□□□ 0.94
CBX3-201ENST00000337620 CFAP65Q6ZU64 1925 aaKnown RBP20.94■□□□□ 0.94
CBX3-201ENST00000337620 NBPF8Q3BBV2 869 aa20.94■□□□□ 0.94
CBX3-201ENST00000337620 ZNF326Q5BKZ1 582 aaKnown RBP20.94■□□□□ 0.94
CBX3-201ENST00000337620 PPP6R1Q9UPN7 881 aa20.94■□□□□ 0.94
CBX3-201ENST00000337620 CLTCL1P53675 1640 aa20.92■□□□□ 0.94
CBX3-201ENST00000337620 ARHGAP31Q2M1Z3 1444 aa20.9■□□□□ 0.94
CBX3-201ENST00000337620 UGGT1Q9NYU2 1555 aa20.9■□□□□ 0.94
CBX3-201ENST00000337620 ESF1Q9H501 851 aaKnown RBP20.89■□□□□ 0.93
CBX3-201ENST00000337620 SPATA31E1Q6ZUB1 1445 aa20.87■□□□□ 0.93
CBX3-201ENST00000337620 CNTLNQ9NXG0 1405 aa20.87■□□□□ 0.93
CBX3-201ENST00000337620 CLTCQ00610 1675 aaKnown RBP20.86■□□□□ 0.93
CBX3-201ENST00000337620 NOS1P29475 1434 aa20.85■□□□□ 0.93
CBX3-201ENST00000337620 CHGAP10645 457 aaKnown RBP20.84■□□□□ 0.93
CBX3-201ENST00000337620 HIRIP3Q9BW71 556 aaPredicted RBP20.84■□□□□ 0.93
CBX3-201ENST00000337620 UHRF1BP1Q6BDS2 1440 aa20.84■□□□□ 0.93
CBX3-201ENST00000337620 FBXO31Q5XUX0 539 aaPredicted RBP20.83■□□□□ 0.92
CBX3-201ENST00000337620 KIF1BO60333 1816 aa20.82■□□□□ 0.92
CBX3-201ENST00000337620 SYNMO15061 1565 aa20.8■□□□□ 0.92
CBX3-201ENST00000337620 PREX1Q8TCU6 1659 aa20.8■□□□□ 0.92
CBX3-201ENST00000337620 PRAG1Q86YV5 1406 aa20.78■□□□□ 0.92
CBX3-201ENST00000337620 ZMYM3Q14202 1370 aa20.78■□□□□ 0.92
CBX3-201ENST00000337620 EIF4G2P78344 907 aaKnown RBP eCLIP20.78■□□□□ 0.92
CBX3-201ENST00000337620 DIEXFQ68CQ4 756 aaKnown RBP20.78■□□□□ 0.92
CBX3-201ENST00000337620 SLC52A1Q9NWF4 448 aa20.78■□□□□ 0.92
CBX3-201ENST00000337620 IDI1Q13907 227 aa20.77■□□□□ 0.92
CBX3-201ENST00000337620 NEURL4Q96JN8 1562 aa20.77■□□□□ 0.92
CBX3-201ENST00000337620 ERVK-7P63135 1459 aa20.77■□□□□ 0.91
CBX3-201ENST00000337620 HSPA5P11021 654 aaKnown RBP20.77■□□□□ 0.91
CBX3-201ENST00000337620 RALGAPBQ86X10 1494 aa20.75■□□□□ 0.91
CBX3-201ENST00000337620 MROH2AA6NES4 1674 aa20.75■□□□□ 0.91
CBX3-201ENST00000337620 STAC3Q96MF2 364 aa20.75■□□□□ 0.91
CBX3-201ENST00000337620 PIK3C2BO00750 1634 aa20.75■□□□□ 0.91
CBX3-201ENST00000337620 ADGRB3O60242 1522 aa20.74■□□□□ 0.91
CBX3-201ENST00000337620 CARD11Q9BXL7 1154 aa20.73■□□□□ 0.91
CBX3-201ENST00000337620 ROCK2O75116 1388 aaKnown RBP20.72■□□□□ 0.91
CBX3-201ENST00000337620 NBPF1Q3BBV0 1214 aa20.7■□□□□ 0.9
CBX3-201ENST00000337620 TRPM1Q7Z4N2 1603 aa20.7■□□□□ 0.9
CBX3-201ENST00000337620 SPATA31D1Q6ZQQ2 1576 aa20.7■□□□□ 0.9
CBX3-201ENST00000337620 STAG3Q9UJ98 1225 aa20.68■□□□□ 0.9
CBX3-201ENST00000337620 MADDQ8WXG6 1647 aa20.68■□□□□ 0.9
CBX3-201ENST00000337620 RPGRIP1LQ68CZ1 1315 aa20.68■□□□□ 0.9
CBX3-201ENST00000337620 USP47Q96K76 1375 aa20.67■□□□□ 0.9
CBX3-201ENST00000337620 ADGRF5Q8IZF2 1346 aa20.67■□□□□ 0.9
CBX3-201ENST00000337620 CEBPAP49715 358 aaPredicted RBP20.66■□□□□ 0.9
CBX3-201ENST00000337620 PLPPR3Q6T4P5 718 aa20.66■□□□□ 0.9
CBX3-201ENST00000337620 MYOM2P54296 1465 aa20.66■□□□□ 0.9
CBX3-201ENST00000337620 IFT172Q9UG01 1749 aa20.66■□□□□ 0.9
CBX3-201ENST00000337620 FER1L4A9Z1Z3 1794 aa20.65■□□□□ 0.9
CBX3-201ENST00000337620 NUTM2DQ5VT03 806 aaPredicted RBP20.64■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms