RNA–Protein interactions for RNA: ENST00000335535.3

LCE4A-201, Transcript of late cornified envelope 4A, humanhuman

APPRIS P1 BASIC

Gene LCE4A, Length 388 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCE4A-201ENST00000335535 GGT6Q6P531 493 aa19.24■□□□□ 0.67
LCE4A-201ENST00000335535 LRRC7Q96NW7 1537 aa19.24■□□□□ 0.67
LCE4A-201ENST00000335535 NPHP4O75161 1426 aaPredicted RBP19.24■□□□□ 0.67
LCE4A-201ENST00000335535 ADGBQ8N7X0 1667 aa19.24■□□□□ 0.67
LCE4A-201ENST00000335535 PLEKHH2Q8IVE3 1493 aa19.23■□□□□ 0.67
LCE4A-201ENST00000335535 ANKLE2Q86XL3 938 aa19.23■□□□□ 0.67
LCE4A-201ENST00000335535 FAM135AQ9P2D6 1515 aa19.23■□□□□ 0.67
LCE4A-201ENST00000335535 GPATCH8Q9UKJ3 1502 aaKnown RBP19.22■□□□□ 0.67
LCE4A-201ENST00000335535 PZPP20742 1482 aa19.22■□□□□ 0.67
LCE4A-201ENST00000335535 STRCP1A6NGW2 1772 aa19.21■□□□□ 0.67
LCE4A-201ENST00000335535 CASKIN1Q8WXD9 1431 aa19.2■□□□□ 0.66
LCE4A-201ENST00000335535 HNRNPMP52272 730 aaKnown RBP eCLIP19.2■□□□□ 0.66
LCE4A-201ENST00000335535 NLRP1Q9C000 1473 aa19.2■□□□□ 0.66
LCE4A-201ENST00000335535 IQGAP1P46940 1657 aa19.2■□□□□ 0.66
LCE4A-201ENST00000335535 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.19■□□□□ 0.66
LCE4A-201ENST00000335535 CEP162Q5TB80 1403 aa19.19■□□□□ 0.66
LCE4A-201ENST00000335535 THEMISQ8N1K5 641 aaPredicted RBP19.17■□□□□ 0.66
LCE4A-201ENST00000335535 ZNF777Q9ULD5 760 aaPredicted RBP19.17■□□□□ 0.66
LCE4A-201ENST00000335535 UGGT1Q9NYU2 1555 aa19.16■□□□□ 0.66
LCE4A-201ENST00000335535 POTEAQ6S8J7 498 aa19.16■□□□□ 0.66
LCE4A-201ENST00000335535 KDM5DQ9BY66 1539 aa19.15■□□□□ 0.66
LCE4A-201ENST00000335535 FBXO31Q5XUX0 539 aaPredicted RBP19.15■□□□□ 0.66
LCE4A-201ENST00000335535 MIA2Q96PC5 1412 aa19.14■□□□□ 0.65
LCE4A-201ENST00000335535 RTEL1-TNFRSF6BF6WH68 1400 aa19.12■□□□□ 0.65
LCE4A-201ENST00000335535 DHX29Q7Z478 1369 aaKnown RBP19.12■□□□□ 0.65
LCE4A-201ENST00000335535 SENP3Q9H4L4 574 aaPredicted RBP19.1■□□□□ 0.65
LCE4A-201ENST00000335535 ZC3H13Q5T200 1668 aaKnown RBP19.1■□□□□ 0.65
LCE4A-201ENST00000335535 FAM135BQ49AJ0 1406 aa19.09■□□□□ 0.65
LCE4A-201ENST00000335535 FYCO1Q9BQS8 1478 aa19.09■□□□□ 0.65
LCE4A-201ENST00000335535 CFDP1Q9UEE9 299 aaPredicted RBP19.08■□□□□ 0.64
LCE4A-201ENST00000335535 MBD5Q9P267 1494 aa19.08■□□□□ 0.64
LCE4A-201ENST00000335535 SETD1AO15047 1707 aaKnown RBP19.06■□□□□ 0.64
LCE4A-201ENST00000335535 XIRP1Q702N8 1843 aaKnown RBP19.05■□□□□ 0.64
LCE4A-201ENST00000335535 CCNB3Q8WWL7 1395 aa19.03■□□□□ 0.64
LCE4A-201ENST00000335535 WASHC2CQ9Y4E1 1318 aa19.01■□□□□ 0.63
LCE4A-201ENST00000335535 KIF3BO15066 747 aa19■□□□□ 0.63
LCE4A-201ENST00000335535 SCAF11Q99590 1463 aaKnown RBP18.98■□□□□ 0.63
LCE4A-201ENST00000335535 ARHGAP23Q9P227 1491 aa18.97■□□□□ 0.63
LCE4A-201ENST00000335535 TIAM1Q13009 1591 aa18.96■□□□□ 0.63
LCE4A-201ENST00000335535 UBR1Q8IWV7 1749 aa18.96■□□□□ 0.63
LCE4A-201ENST00000335535 ZNF644Q9H582 1327 aaPredicted RBP18.96■□□□□ 0.63
LCE4A-201ENST00000335535 ROBO1Q9Y6N7 1651 aa18.95■□□□□ 0.62
LCE4A-201ENST00000335535 SLIT1O75093 1534 aa18.95■□□□□ 0.62
LCE4A-201ENST00000335535 VPS8Q8N3P4 1428 aa18.95■□□□□ 0.62
LCE4A-201ENST00000335535 UPF1Q92900 1129 aaKnown RBP eCLIP18.95■□□□□ 0.62
LCE4A-201ENST00000335535 SRCAPQ6ZRS2 3230 aa18.95■□□□□ 0.62
LCE4A-201ENST00000335535 ERVK-7P63135 1459 aa18.94■□□□□ 0.62
LCE4A-201ENST00000335535 NCOA2Q15596 1464 aa18.93■□□□□ 0.62
LCE4A-201ENST00000335535 LRRC9Q6ZRR7 1453 aa18.93■□□□□ 0.62
LCE4A-201ENST00000335535 ABCC3O15438 1527 aa18.93■□□□□ 0.62
LCE4A-201ENST00000335535 CCDC141Q6ZP82 1450 aa18.92■□□□□ 0.62
LCE4A-201ENST00000335535 MAP3K1Q13233 1512 aa18.9■□□□□ 0.62
LCE4A-201ENST00000335535 LTKP29376 864 aa18.89■□□□□ 0.61
LCE4A-201ENST00000335535 TMEM94Q12767 1356 aa18.88■□□□□ 0.61
LCE4A-201ENST00000335535 JCADQ9P266 1359 aa18.88■□□□□ 0.61
LCE4A-201ENST00000335535 CAMSAP2Q08AD1 1489 aa18.87■□□□□ 0.61
LCE4A-201ENST00000335535 MTUS2Q5JR59 1369 aa18.87■□□□□ 0.61
LCE4A-201ENST00000335535 RSPH4AQ5TD94 716 aa18.86■□□□□ 0.61
LCE4A-201ENST00000335535 TXNDC2Q86VQ3 553 aa18.84■□□□□ 0.61
LCE4A-201ENST00000335535 PHLPP1O60346 1717 aa18.83■□□□□ 0.61
LCE4A-201ENST00000335535 MROH1Q8NDA8 1641 aa18.83■□□□□ 0.61
LCE4A-201ENST00000335535 EHBP1L1Q8N3D4 1523 aa18.83■□□□□ 0.6
LCE4A-201ENST00000335535 EIF2AK4Q9P2K8 1649 aaKnown RBP18.82■□□□□ 0.6
LCE4A-201ENST00000335535 ARHGEF5Q12774 1597 aa18.82■□□□□ 0.6
LCE4A-201ENST00000335535 PRDM15P57071 1507 aaPredicted RBP18.82■□□□□ 0.6
LCE4A-201ENST00000335535 KCNA6P17658 529 aa18.81■□□□□ 0.6
LCE4A-201ENST00000335535 CDK12Q9NYV4 1490 aaPredicted RBP18.81■□□□□ 0.6
LCE4A-201ENST00000335535 LRP6O75581 1613 aa18.81■□□□□ 0.6
LCE4A-201ENST00000335535 COL16A1Q07092 1604 aaPredicted RBP18.81■□□□□ 0.6
LCE4A-201ENST00000335535 NKTRP30414 1462 aaKnown RBP18.8■□□□□ 0.6
LCE4A-201ENST00000335535 ZNF772Q68DY9 489 aaPredicted RBP18.8■□□□□ 0.6
LCE4A-201ENST00000335535 NWD1Q149M9 1564 aa18.8■□□□□ 0.6
LCE4A-201ENST00000335535 EID1Q9Y6B2 187 aa18.79■□□□□ 0.6
LCE4A-201ENST00000335535 FGD6Q6ZV73 1430 aa18.79■□□□□ 0.6
LCE4A-201ENST00000335535 TMEM2Q9UHN6 1383 aa18.79■□□□□ 0.6
LCE4A-201ENST00000335535 SPATA31A6Q5VVP1 1343 aa18.78■□□□□ 0.6
LCE4A-201ENST00000335535 ARHGAP31Q2M1Z3 1444 aa18.78■□□□□ 0.6
LCE4A-201ENST00000335535 TET3O43151 1660 aa18.78■□□□□ 0.6
LCE4A-201ENST00000335535 KDM5AP29375 1690 aaKnown RBP18.77■□□□□ 0.6
LCE4A-201ENST00000335535 MAST1Q9Y2H9 1570 aa18.76■□□□□ 0.59
LCE4A-201ENST00000335535 CEP152O94986 1710 aa18.75■□□□□ 0.59
LCE4A-201ENST00000335535 SLAIN2Q9P270 581 aa18.75■□□□□ 0.59
LCE4A-201ENST00000335535 MSH6P52701 1360 aa18.74■□□□□ 0.59
LCE4A-201ENST00000335535 PROSER2Q86WR7 435 aaPredicted RBP18.74■□□□□ 0.59
LCE4A-201ENST00000335535 TRIM52Q96A61 297 aa18.74■□□□□ 0.59
LCE4A-201ENST00000335535 PIK3C2BO00750 1634 aa18.74■□□□□ 0.59
LCE4A-201ENST00000335535 SHPRHQ149N8 1683 aa18.73■□□□□ 0.59
LCE4A-201ENST00000335535 TSPY4P0CV99 314 aa18.71■□□□□ 0.59
LCE4A-201ENST00000335535 TSPY10P0CW01 314 aa18.71■□□□□ 0.59
LCE4A-201ENST00000335535 RXRBP28702 533 aa18.7■□□□□ 0.58
LCE4A-201ENST00000335535 AHDC1Q5TGY3 1603 aaPredicted RBP18.7■□□□□ 0.58
LCE4A-201ENST00000335535 EFCAB6Q5THR3 1501 aa18.69■□□□□ 0.58
LCE4A-201ENST00000335535 CFAP65Q6ZU64 1925 aaKnown RBP18.68■□□□□ 0.58
LCE4A-201ENST00000335535 RBM33Q96EV2 1170 aaKnown RBP18.68■□□□□ 0.58
LCE4A-201ENST00000335535 MEX3CQ5U5Q3 659 aaKnown RBP18.67■□□□□ 0.58
LCE4A-201ENST00000335535 NCOA3Q9Y6Q9 1424 aa18.66■□□□□ 0.58
LCE4A-201ENST00000335535 SLC26A8Q96RN1 970 aa18.65■□□□□ 0.58
LCE4A-201ENST00000335535 DUOX2Q9NRD8 1548 aa18.64■□□□□ 0.57
LCE4A-201ENST00000335535 DIP2AQ14689 1571 aa18.63■□□□□ 0.57
LCE4A-201ENST00000335535 KANK4Q5T7N3 995 aaPredicted RBP18.62■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms