RNA–Protein interactions for RNA: ENST00000333213.10

TSEN54-201, Transcript of tRNA splicing endonuclease subunit 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSEN54, Length 1,944 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSEN54-201ENST00000333213 MAGI2Q86UL8 1455 aa34.01■■■■□ 3.03
TSEN54-201ENST00000333213 A2MP01023 1474 aa34■■■■□ 3.03
TSEN54-201ENST00000333213 YEATS2Q9ULM3 1422 aa34■■■■□ 3.03
TSEN54-201ENST00000333213 DIP2CQ9Y2E4 1556 aa33.98■■■■□ 3.03
TSEN54-201ENST00000333213 GRWD1Q9BQ67 446 aaKnown RBP eCLIP33.97■■■■□ 3.03
TSEN54-201ENST00000333213 FAM135AQ9P2D6 1515 aa33.97■■■■□ 3.03
TSEN54-201ENST00000333213 EIF2AK4Q9P2K8 1649 aaKnown RBP33.95■■■■□ 3.03
TSEN54-201ENST00000333213 DEPDC5O75140 1603 aa33.94■■■■□ 3.02
TSEN54-201ENST00000333213 KIF3BO15066 747 aa33.93■■■■□ 3.02
TSEN54-201ENST00000333213 PKD2Q13563 968 aa33.93■■■■□ 3.02
TSEN54-201ENST00000333213 NEUROD1Q13562 356 aa33.92■■■■□ 3.02
TSEN54-201ENST00000333213 IQGAP3Q86VI3 1631 aa33.92■■■■□ 3.02
TSEN54-201ENST00000333213 ANKRD30BQ9BXX2 1392 aa33.91■■■■□ 3.02
TSEN54-201ENST00000333213 MROH1Q8NDA8 1641 aa33.88■■■■□ 3.01
TSEN54-201ENST00000333213 PRDM15P57071 1507 aaPredicted RBP33.83■■■■□ 3.01
TSEN54-201ENST00000333213 VWDEQ8N2E2 1590 aa33.82■■■■□ 3
TSEN54-201ENST00000333213 BCORL1Q5H9F3 1711 aa33.81■■■■□ 3
TSEN54-201ENST00000333213 RNF17Q9BXT8 1623 aaKnown RBP33.81■■■■□ 3
TSEN54-201ENST00000333213 ATP10AO60312 1499 aa33.78■■■■□ 3
TSEN54-201ENST00000333213 GGT6Q6P531 493 aa33.73■■■□□ 2.99
TSEN54-201ENST00000333213 ARHGEF40Q8TER5 1519 aa33.72■■■□□ 2.99
TSEN54-201ENST00000333213 KANK1Q14678 1352 aa33.72■■■□□ 2.99
TSEN54-201ENST00000333213 RPRD2Q5VT52 1461 aaKnown RBP33.72■■■□□ 2.99
TSEN54-201ENST00000333213 REREQ9P2R6 1566 aa33.71■■■□□ 2.99
TSEN54-201ENST00000333213 TIMELESSQ9UNS1 1208 aa33.71■■■□□ 2.99
TSEN54-201ENST00000333213 SIGLEC1Q9BZZ2 1709 aa33.7■■■□□ 2.99
TSEN54-201ENST00000333213 PLA2R1Q13018 1463 aa33.69■■■□□ 2.98
TSEN54-201ENST00000333213 E9PCH4 1651 aa33.68■■■□□ 2.98
TSEN54-201ENST00000333213 TET3O43151 1660 aa33.68■■■□□ 2.98
TSEN54-201ENST00000333213 TONSLQ96HA7 1378 aa33.66■■■□□ 2.98
TSEN54-201ENST00000333213 LMTK2Q8IWU2 1503 aa33.64■■■□□ 2.98
TSEN54-201ENST00000333213 CEP152O94986 1710 aa33.63■■■□□ 2.97
TSEN54-201ENST00000333213 AGLP35573 1532 aa33.63■■■□□ 2.97
TSEN54-201ENST00000333213 ABCC3O15438 1527 aa33.59■■■□□ 2.97
TSEN54-201ENST00000333213 EFCAB6Q5THR3 1501 aa33.59■■■□□ 2.97
TSEN54-201ENST00000333213 PPP1R15AO75807 674 aaPredicted RBP33.58■■■□□ 2.97
TSEN54-201ENST00000333213 WASHC2CQ9Y4E1 1318 aa33.56■■■□□ 2.96
TSEN54-201ENST00000333213 L3MBTL2Q969R5 705 aa33.55■■■□□ 2.96
TSEN54-201ENST00000333213 PTPRTO14522 1441 aa33.54■■■□□ 2.96
TSEN54-201ENST00000333213 CCDC144AA2RUR9 1427 aa33.51■■■□□ 2.96
TSEN54-201ENST00000333213 NPATQ14207 1427 aa33.5■■■□□ 2.95
TSEN54-201ENST00000333213 SPHKAPQ2M3C7 1700 aa33.49■■■□□ 2.95
TSEN54-201ENST00000333213 TRPM2O94759 1503 aa33.48■■■□□ 2.95
TSEN54-201ENST00000333213 CAMSAP1Q5T5Y3 1602 aa33.48■■■□□ 2.95
TSEN54-201ENST00000333213 ZC3H13Q5T200 1668 aaKnown RBP33.47■■■□□ 2.95
TSEN54-201ENST00000333213 MLECQ14165 292 aa33.43■■■□□ 2.94
TSEN54-201ENST00000333213 CLTCL1P53675 1640 aa33.39■■■□□ 2.94
TSEN54-201ENST00000333213 ARHGAP31Q2M1Z3 1444 aa33.39■■■□□ 2.94
TSEN54-201ENST00000333213 PPP6R1Q9UPN7 881 aa33.39■■■□□ 2.94
TSEN54-201ENST00000333213 UGGT1Q9NYU2 1555 aa33.37■■■□□ 2.93
TSEN54-201ENST00000333213 CFAP65Q6ZU64 1925 aaKnown RBP33.36■■■□□ 2.93
TSEN54-201ENST00000333213 ARID4BQ4LE39 1312 aaPredicted RBP33.35■■■□□ 2.93
TSEN54-201ENST00000333213 CLTCQ00610 1675 aaKnown RBP33.33■■■□□ 2.93
TSEN54-201ENST00000333213 NOS1P29475 1434 aa33.33■■■□□ 2.93
TSEN54-201ENST00000333213 SPATA31E1Q6ZUB1 1445 aa33.32■■■□□ 2.92
TSEN54-201ENST00000333213 NBPF8Q3BBV2 869 aa33.32■■■□□ 2.92
TSEN54-201ENST00000333213 RGL3Q3MIN7 710 aa33.31■■■□□ 2.92
TSEN54-201ENST00000333213 CNTLNQ9NXG0 1405 aa33.29■■■□□ 2.92
TSEN54-201ENST00000333213 SYNMO15061 1565 aa33.26■■■□□ 2.92
TSEN54-201ENST00000333213 DCAF11Q8TEB1 546 aa33.26■■■□□ 2.91
TSEN54-201ENST00000333213 FBXO31Q5XUX0 539 aaPredicted RBP33.24■■■□□ 2.91
TSEN54-201ENST00000333213 PREX1Q8TCU6 1659 aa33.23■■■□□ 2.91
TSEN54-201ENST00000333213 KDM2AQ9Y2K7 1162 aa33.22■■■□□ 2.91
TSEN54-201ENST00000333213 ZNF316A6NFI3 1004 aaPredicted RBP33.21■■■□□ 2.91
TSEN54-201ENST00000333213 UHRF1BP1Q6BDS2 1440 aa33.2■■■□□ 2.91
TSEN54-201ENST00000333213 PIK3C2BO00750 1634 aa33.19■■■□□ 2.9
TSEN54-201ENST00000333213 ZMYM3Q14202 1370 aa33.18■■■□□ 2.9
TSEN54-201ENST00000333213 NEURL4Q96JN8 1562 aa33.18■■■□□ 2.9
TSEN54-201ENST00000333213 ERVK-7P63135 1459 aa33.18■■■□□ 2.9
TSEN54-201ENST00000333213 KIF1BO60333 1816 aa33.16■■■□□ 2.9
TSEN54-201ENST00000333213 ZNF326Q5BKZ1 582 aaKnown RBP33.16■■■□□ 2.9
TSEN54-201ENST00000333213 MROH2AA6NES4 1674 aa33.15■■■□□ 2.9
TSEN54-201ENST00000333213 ESF1Q9H501 851 aaKnown RBP33.15■■■□□ 2.9
TSEN54-201ENST00000333213 ADGRB3O60242 1522 aa33.13■■■□□ 2.89
TSEN54-201ENST00000333213 IDI1Q13907 227 aa33.13■■■□□ 2.89
TSEN54-201ENST00000333213 SPATA31D1Q6ZQQ2 1576 aa33.12■■■□□ 2.89
TSEN54-201ENST00000333213 PRAG1Q86YV5 1406 aa33.1■■■□□ 2.89
TSEN54-201ENST00000333213 SLC52A1Q9NWF4 448 aa33.09■■■□□ 2.89
TSEN54-201ENST00000333213 CHGAP10645 457 aaKnown RBP33.06■■■□□ 2.88
TSEN54-201ENST00000333213 HIRIP3Q9BW71 556 aaPredicted RBP33.04■■■□□ 2.88
TSEN54-201ENST00000333213 FER1L4A9Z1Z3 1794 aa33.03■■■□□ 2.88
TSEN54-201ENST00000333213 RALGAPBQ86X10 1494 aa33.03■■■□□ 2.88
TSEN54-201ENST00000333213 IFT172Q9UG01 1749 aa33.01■■■□□ 2.87
TSEN54-201ENST00000333213 CEBPAP49715 358 aaPredicted RBP32.99■■■□□ 2.87
TSEN54-201ENST00000333213 TRPM1Q7Z4N2 1603 aa32.99■■■□□ 2.87
TSEN54-201ENST00000333213 TMEM131LA2VDJ0 1609 aa32.98■■■□□ 2.87
TSEN54-201ENST00000333213 MADDQ8WXG6 1647 aa32.98■■■□□ 2.87
TSEN54-201ENST00000333213 STAC3Q96MF2 364 aa32.96■■■□□ 2.87
TSEN54-201ENST00000333213 C3P01024 1663 aa32.96■■■□□ 2.87
TSEN54-201ENST00000333213 MYOM2P54296 1465 aa32.95■■■□□ 2.87
TSEN54-201ENST00000333213 MYO5BQ9ULV0 1848 aa32.95■■■□□ 2.86
TSEN54-201ENST00000333213 NBPF1Q3BBV0 1214 aa32.94■■■□□ 2.86
TSEN54-201ENST00000333213 ADGRF5Q8IZF2 1346 aa32.94■■■□□ 2.86
TSEN54-201ENST00000333213 HSPA5P11021 654 aaKnown RBP32.93■■■□□ 2.86
TSEN54-201ENST00000333213 PPLO60437 1756 aa32.93■■■□□ 2.86
TSEN54-201ENST00000333213 EIF4G2P78344 907 aaKnown RBP eCLIP32.91■■■□□ 2.86
TSEN54-201ENST00000333213 TNRQ92752 1358 aa32.91■■■□□ 2.86
TSEN54-201ENST00000333213 ADAMTSL3P82987 1691 aa32.91■■■□□ 2.86
TSEN54-201ENST00000333213 NEXMIFQ5QGS0 1516 aa32.9■■■□□ 2.86
TSEN54-201ENST00000333213 RPGRIP1LQ68CZ1 1315 aa32.9■■■□□ 2.86
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms