RNA–Protein interactions for RNA: ENST00000332814.6

C11orf88-201, Transcript of chromosome 11 open reading frame 88, humanhuman

APPRIS P4 TSL 5 BASIC

Gene C11orf88, Length 795 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88-201ENST00000332814 NCOA1Q15788 1441 aa24.95■■□□□ 1.59
C11orf88-201ENST00000332814 CEBPAP49715 358 aaPredicted RBP24.95■■□□□ 1.58
C11orf88-201ENST00000332814 CLTCQ00610 1675 aaKnown RBP24.94■■□□□ 1.58
C11orf88-201ENST00000332814 MROH2AA6NES4 1674 aa24.94■■□□□ 1.58
C11orf88-201ENST00000332814 FAM135AQ9P2D6 1515 aa24.93■■□□□ 1.58
C11orf88-201ENST00000332814 KDM5DQ9BY66 1539 aa24.92■■□□□ 1.58
C11orf88-201ENST00000332814 RNF17Q9BXT8 1623 aaKnown RBP24.92■■□□□ 1.58
C11orf88-201ENST00000332814 C3P01024 1663 aa24.91■■□□□ 1.58
C11orf88-201ENST00000332814 WASHC2CQ9Y4E1 1318 aa24.91■■□□□ 1.58
C11orf88-201ENST00000332814 ZMYM3Q14202 1370 aa24.91■■□□□ 1.58
C11orf88-201ENST00000332814 PTPRKQ15262 1439 aa24.89■■□□□ 1.58
C11orf88-201ENST00000332814 ROCK1Q13464 1354 aa24.88■■□□□ 1.57
C11orf88-201ENST00000332814 ANKRD50Q9ULJ7 1429 aa24.86■■□□□ 1.57
C11orf88-201ENST00000332814 KANK1Q14678 1352 aa24.85■■□□□ 1.57
C11orf88-201ENST00000332814 ZC3H13Q5T200 1668 aaKnown RBP24.85■■□□□ 1.57
C11orf88-201ENST00000332814 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.84■■□□□ 1.57
C11orf88-201ENST00000332814 NPATQ14207 1427 aa24.83■■□□□ 1.57
C11orf88-201ENST00000332814 UHRF1BP1Q6BDS2 1440 aa24.83■■□□□ 1.57
C11orf88-201ENST00000332814 PRDM15P57071 1507 aaPredicted RBP24.82■■□□□ 1.56
C11orf88-201ENST00000332814 MROH1Q8NDA8 1641 aa24.82■■□□□ 1.56
C11orf88-201ENST00000332814 PREX1Q8TCU6 1659 aa24.81■■□□□ 1.56
C11orf88-201ENST00000332814 LMTK3Q96Q04 1460 aa24.81■■□□□ 1.56
C11orf88-201ENST00000332814 ABCC3O15438 1527 aa24.81■■□□□ 1.56
C11orf88-201ENST00000332814 DEPDC5O75140 1603 aa24.79■■□□□ 1.56
C11orf88-201ENST00000332814 PZPP20742 1482 aa24.77■■□□□ 1.56
C11orf88-201ENST00000332814 CEP152O94986 1710 aa24.75■■□□□ 1.55
C11orf88-201ENST00000332814 CAMSAP1Q5T5Y3 1602 aa24.73■■□□□ 1.55
C11orf88-201ENST00000332814 HSPA2P54652 639 aa24.71■■□□□ 1.55
C11orf88-201ENST00000332814 TNRQ92752 1358 aa24.7■■□□□ 1.55
C11orf88-201ENST00000332814 SETD1BQ9UPS6 1966 aaKnown RBP24.69■■□□□ 1.54
C11orf88-201ENST00000332814 MYO3AQ8NEV4 1616 aa24.69■■□□□ 1.54
C11orf88-201ENST00000332814 FBXO31Q5XUX0 539 aaPredicted RBP24.69■■□□□ 1.54
C11orf88-201ENST00000332814 UNC13BO14795 1591 aa24.68■■□□□ 1.54
C11orf88-201ENST00000332814 VWDEQ8N2E2 1590 aa24.67■■□□□ 1.54
C11orf88-201ENST00000332814 LMTK2Q8IWU2 1503 aa24.67■■□□□ 1.54
C11orf88-201ENST00000332814 GCC2Q8IWJ2 1684 aa24.66■■□□□ 1.54
C11orf88-201ENST00000332814 ARHGAP31Q2M1Z3 1444 aa24.65■■□□□ 1.54
C11orf88-201ENST00000332814 ERVK-7P63135 1459 aa24.64■■□□□ 1.53
C11orf88-201ENST00000332814 CEP170BQ9Y4F5 1589 aaPredicted RBP24.63■■□□□ 1.53
C11orf88-201ENST00000332814 HFM1A2PYH4 1435 aa24.63■■□□□ 1.53
C11orf88-201ENST00000332814 NAIPQ13075 1403 aa24.63■■□□□ 1.53
C11orf88-201ENST00000332814 SPATA31D1Q6ZQQ2 1576 aa24.63■■□□□ 1.53
C11orf88-201ENST00000332814 ZNF142P52746 1687 aaPredicted RBP24.62■■□□□ 1.53
C11orf88-201ENST00000332814 EFCAB6Q5THR3 1501 aa24.61■■□□□ 1.53
C11orf88-201ENST00000332814 NUP155O75694 1391 aa24.61■■□□□ 1.53
C11orf88-201ENST00000332814 A2ML1A8K2U0 1454 aa24.61■■□□□ 1.53
C11orf88-201ENST00000332814 NLRP1Q9C000 1473 aa24.61■■□□□ 1.53
C11orf88-201ENST00000332814 TET3O43151 1660 aa24.58■■□□□ 1.53
C11orf88-201ENST00000332814 IQGAP3Q86VI3 1631 aa24.57■■□□□ 1.52
C11orf88-201ENST00000332814 RPRD2Q5VT52 1461 aaKnown RBP24.56■■□□□ 1.52
C11orf88-201ENST00000332814 TRIM52Q96A61 297 aa24.53■■□□□ 1.52
C11orf88-201ENST00000332814 UGGT1Q9NYU2 1555 aa24.52■■□□□ 1.52
C11orf88-201ENST00000332814 DMRT2Q9Y5R5 561 aa24.5■■□□□ 1.51
C11orf88-201ENST00000332814 PLA2R1Q13018 1463 aa24.5■■□□□ 1.51
C11orf88-201ENST00000332814 THEMISQ8N1K5 641 aaPredicted RBP24.49■■□□□ 1.51
C11orf88-201ENST00000332814 CFAP65Q6ZU64 1925 aaKnown RBP24.49■■□□□ 1.51
C11orf88-201ENST00000332814 STAG3Q9UJ98 1225 aa24.48■■□□□ 1.51
C11orf88-201ENST00000332814 NOS1P29475 1434 aa24.47■■□□□ 1.51
C11orf88-201ENST00000332814 E9PCH4 1651 aa24.46■■□□□ 1.51
C11orf88-201ENST00000332814 PKD2Q13563 968 aa24.45■■□□□ 1.5
C11orf88-201ENST00000332814 SYNMO15061 1565 aa24.45■■□□□ 1.5
C11orf88-201ENST00000332814 SETD5Q9C0A6 1442 aa24.44■■□□□ 1.5
C11orf88-201ENST00000332814 ACIN1Q9UKV3 1341 aaKnown RBP24.43■■□□□ 1.5
C11orf88-201ENST00000332814 SLC52A1Q9NWF4 448 aa24.43■■□□□ 1.5
C11orf88-201ENST00000332814 STRCQ7RTU9 1775 aa24.43■■□□□ 1.5
C11orf88-201ENST00000332814 NCKAP5LQ9HCH0 1330 aa24.41■■□□□ 1.5
C11orf88-201ENST00000332814 PIK3C2BO00750 1634 aa24.41■■□□□ 1.5
C11orf88-201ENST00000332814 ANKLE2Q86XL3 938 aa24.4■■□□□ 1.5
C11orf88-201ENST00000332814 SLC4A1APQ9BWU0 796 aaKnown RBP24.4■■□□□ 1.5
C11orf88-201ENST00000332814 UBR1Q8IWV7 1749 aa24.39■■□□□ 1.5
C11orf88-201ENST00000332814 PTPRTO14522 1441 aa24.39■■□□□ 1.5
C11orf88-201ENST00000332814 IDI1Q13907 227 aa24.39■■□□□ 1.49
C11orf88-201ENST00000332814 ADGRB3O60242 1522 aa24.36■■□□□ 1.49
C11orf88-201ENST00000332814 RAB3GAP2Q9H2M9 1393 aa24.35■■□□□ 1.49
C11orf88-201ENST00000332814 POLR1AO95602 1720 aaPredicted RBP24.35■■□□□ 1.49
C11orf88-201ENST00000332814 KDM5AP29375 1690 aaKnown RBP24.34■■□□□ 1.49
C11orf88-201ENST00000332814 CHGAP10645 457 aaKnown RBP24.34■■□□□ 1.49
C11orf88-201ENST00000332814 EID1Q9Y6B2 187 aa24.33■■□□□ 1.49
C11orf88-201ENST00000332814 SPHKAPQ2M3C7 1700 aa24.32■■□□□ 1.48
C11orf88-201ENST00000332814 SLIT1O75093 1534 aa24.3■■□□□ 1.48
C11orf88-201ENST00000332814 TMEM2Q9UHN6 1383 aa24.3■■□□□ 1.48
C11orf88-201ENST00000332814 NPHP4O75161 1426 aaPredicted RBP24.29■■□□□ 1.48
C11orf88-201ENST00000332814 SCAF11Q99590 1463 aaKnown RBP24.29■■□□□ 1.48
C11orf88-201ENST00000332814 ARHGAP23Q9P227 1491 aa24.29■■□□□ 1.48
C11orf88-201ENST00000332814 NEURL4Q96JN8 1562 aa24.29■■□□□ 1.48
C11orf88-201ENST00000332814 TXNDC2Q86VQ3 553 aa24.28■■□□□ 1.48
C11orf88-201ENST00000332814 TRPM2O94759 1503 aa24.28■■□□□ 1.48
C11orf88-201ENST00000332814 MPHOSPH9Q99550 1183 aa24.27■■□□□ 1.48
C11orf88-201ENST00000332814 MED14O60244 1454 aa24.25■■□□□ 1.47
C11orf88-201ENST00000332814 HDGFP51858 240 aaKnown RBP24.24■■□□□ 1.47
C11orf88-201ENST00000332814 TMEM131LA2VDJ0 1609 aa24.24■■□□□ 1.47
C11orf88-201ENST00000332814 PPP1R15AO75807 674 aaPredicted RBP24.23■■□□□ 1.47
C11orf88-201ENST00000332814 IQGAP1P46940 1657 aa24.23■■□□□ 1.47
C11orf88-201ENST00000332814 LTKP29376 864 aa24.21■■□□□ 1.47
C11orf88-201ENST00000332814 FOXD1Q16676 465 aa24.21■■□□□ 1.47
C11orf88-201ENST00000332814 CLTCL1P53675 1640 aa24.21■■□□□ 1.47
C11orf88-201ENST00000332814 RIMS2Q9UQ26 1411 aa24.2■■□□□ 1.46
C11orf88-201ENST00000332814 HRCP23327 699 aa24.2■■□□□ 1.46
C11orf88-201ENST00000332814 ZNF326Q5BKZ1 582 aaKnown RBP24.19■■□□□ 1.46
C11orf88-201ENST00000332814 BCANQ96GW7 911 aa24.19■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms