RNA–Protein interactions for RNA: ENST00000332220.10

YBX1-202, Transcript of Y-box binding protein 1, humanhuman

TSL 5

Gene YBX1, Length 776 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX1-202ENST00000332220 GGT6Q6P531 493 aa31.86■■■□□ 2.69
YBX1-202ENST00000332220 MROH2AA6NES4 1674 aa31.85■■■□□ 2.69
YBX1-202ENST00000332220 DEPDC5O75140 1603 aa31.85■■■□□ 2.69
YBX1-202ENST00000332220 C3P01024 1663 aa31.84■■■□□ 2.69
YBX1-202ENST00000332220 GCC2Q8IWJ2 1684 aa31.82■■■□□ 2.68
YBX1-202ENST00000332220 CEP152O94986 1710 aa31.81■■■□□ 2.68
YBX1-202ENST00000332220 ANKRD50Q9ULJ7 1429 aa31.79■■■□□ 2.68
YBX1-202ENST00000332220 AEBP2Q6ZN18 517 aaPredicted RBP31.78■■■□□ 2.68
YBX1-202ENST00000332220 PRDM15P57071 1507 aaPredicted RBP31.77■■■□□ 2.68
YBX1-202ENST00000332220 ZC3H13Q5T200 1668 aaKnown RBP31.76■■■□□ 2.68
YBX1-202ENST00000332220 CNTLNQ9NXG0 1405 aa31.76■■■□□ 2.68
YBX1-202ENST00000332220 KDM5DQ9BY66 1539 aa31.75■■■□□ 2.67
YBX1-202ENST00000332220 FAM135AQ9P2D6 1515 aa31.75■■■□□ 2.67
YBX1-202ENST00000332220 ESF1Q9H501 851 aaKnown RBP31.73■■■□□ 2.67
YBX1-202ENST00000332220 PPP6R1Q9UPN7 881 aa31.72■■■□□ 2.67
YBX1-202ENST00000332220 ABCC3O15438 1527 aa31.71■■■□□ 2.67
YBX1-202ENST00000332220 UNC13BO14795 1591 aa31.71■■■□□ 2.67
YBX1-202ENST00000332220 CFAP65Q6ZU64 1925 aaKnown RBP31.71■■■□□ 2.67
YBX1-202ENST00000332220 PLPPR3Q6T4P5 718 aa31.7■■■□□ 2.67
YBX1-202ENST00000332220 NAIPQ13075 1403 aa31.69■■■□□ 2.66
YBX1-202ENST00000332220 CEBPAP49715 358 aaPredicted RBP31.69■■■□□ 2.66
YBX1-202ENST00000332220 CAMSAP1Q5T5Y3 1602 aa31.68■■■□□ 2.66
YBX1-202ENST00000332220 SETD1BQ9UPS6 1966 aaKnown RBP31.68■■■□□ 2.66
YBX1-202ENST00000332220 VWDEQ8N2E2 1590 aa31.68■■■□□ 2.66
YBX1-202ENST00000332220 HFM1A2PYH4 1435 aa31.66■■■□□ 2.66
YBX1-202ENST00000332220 WASHC2CQ9Y4E1 1318 aa31.65■■■□□ 2.66
YBX1-202ENST00000332220 ZMYM3Q14202 1370 aa31.65■■■□□ 2.66
YBX1-202ENST00000332220 GRWD1Q9BQ67 446 aaKnown RBP eCLIP31.63■■■□□ 2.658e-10■□□□□ 8.8
YBX1-202ENST00000332220 KANK1Q14678 1352 aa31.58■■■□□ 2.65
YBX1-202ENST00000332220 PREX1Q8TCU6 1659 aa31.58■■■□□ 2.65
YBX1-202ENST00000332220 IQGAP3Q86VI3 1631 aa31.57■■■□□ 2.64
YBX1-202ENST00000332220 LMTK2Q8IWU2 1503 aa31.57■■■□□ 2.64
YBX1-202ENST00000332220 PZPP20742 1482 aa31.55■■■□□ 2.64
YBX1-202ENST00000332220 TET3O43151 1660 aa31.54■■■□□ 2.64
YBX1-202ENST00000332220 EFCAB6Q5THR3 1501 aa31.51■■■□□ 2.63
YBX1-202ENST00000332220 NPATQ14207 1427 aa31.5■■■□□ 2.63
YBX1-202ENST00000332220 MYO3AQ8NEV4 1616 aa31.47■■■□□ 2.63
YBX1-202ENST00000332220 FBXO31Q5XUX0 539 aaPredicted RBP31.47■■■□□ 2.63
YBX1-202ENST00000332220 ARHGAP31Q2M1Z3 1444 aa31.47■■■□□ 2.63
YBX1-202ENST00000332220 E9PCH4 1651 aa31.47■■■□□ 2.63
YBX1-202ENST00000332220 NUP155O75694 1391 aa31.45■■■□□ 2.63
YBX1-202ENST00000332220 SPATA31D1Q6ZQQ2 1576 aa31.45■■■□□ 2.63
YBX1-202ENST00000332220 LMTK3Q96Q04 1460 aa31.45■■■□□ 2.62
YBX1-202ENST00000332220 SETD5Q9C0A6 1442 aa31.43■■■□□ 2.62
YBX1-202ENST00000332220 ERVK-7P63135 1459 aa31.43■■■□□ 2.62
YBX1-202ENST00000332220 ZNF142P52746 1687 aaPredicted RBP31.42■■■□□ 2.62
YBX1-202ENST00000332220 UHRF1BP1Q6BDS2 1440 aa31.39■■■□□ 2.62
YBX1-202ENST00000332220 TNRQ92752 1358 aa31.38■■■□□ 2.61
YBX1-202ENST00000332220 SYNMO15061 1565 aa31.34■■■□□ 2.61
YBX1-202ENST00000332220 CEP170BQ9Y4F5 1589 aaPredicted RBP31.34■■■□□ 2.61
YBX1-202ENST00000332220 RPRD2Q5VT52 1461 aaKnown RBP31.34■■■□□ 2.61
YBX1-202ENST00000332220 RAB3GAP2Q9H2M9 1393 aa31.34■■■□□ 2.61
YBX1-202ENST00000332220 TRIM52Q96A61 297 aa31.33■■■□□ 2.61
YBX1-202ENST00000332220 SPHKAPQ2M3C7 1700 aa31.3■■■□□ 2.6
YBX1-202ENST00000332220 NOS1P29475 1434 aa31.3■■■□□ 2.6
YBX1-202ENST00000332220 A2ML1A8K2U0 1454 aa31.27■■■□□ 2.6
YBX1-202ENST00000332220 NLRP1Q9C000 1473 aa31.27■■■□□ 2.6
YBX1-202ENST00000332220 HSPA2P54652 639 aa31.26■■■□□ 2.59
YBX1-202ENST00000332220 TRIM26Q12899 539 aaPredicted RBP31.26■■■□□ 2.59
YBX1-202ENST00000332220 PIK3C2BO00750 1634 aa31.25■■■□□ 2.59
YBX1-202ENST00000332220 UBR1Q8IWV7 1749 aa31.24■■■□□ 2.59
YBX1-202ENST00000332220 MYO5BQ9ULV0 1848 aa31.23■■■□□ 2.59
YBX1-202ENST00000332220 STRCQ7RTU9 1775 aa31.2■■■□□ 2.59
YBX1-202ENST00000332220 UGGT1Q9NYU2 1555 aa31.19■■■□□ 2.58
YBX1-202ENST00000332220 SLC4A1APQ9BWU0 796 aaKnown RBP31.19■■■□□ 2.58
YBX1-202ENST00000332220 KDM5AP29375 1690 aaKnown RBP31.16■■■□□ 2.58
YBX1-202ENST00000332220 PKD2Q13563 968 aa31.16■■■□□ 2.58
YBX1-202ENST00000332220 ACIN1Q9UKV3 1341 aaKnown RBP31.16■■■□□ 2.58
YBX1-202ENST00000332220 HRCP23327 699 aa31.14■■■□□ 2.58
YBX1-202ENST00000332220 PTPRTO14522 1441 aa31.14■■■□□ 2.58
YBX1-202ENST00000332220 MPHOSPH9Q99550 1183 aa31.13■■■□□ 2.57
YBX1-202ENST00000332220 POLR1AO95602 1720 aaPredicted RBP31.12■■■□□ 2.57
YBX1-202ENST00000332220 IDI1Q13907 227 aa31.12■■■□□ 2.57
YBX1-202ENST00000332220 TRPM2O94759 1503 aa31.11■■■□□ 2.57
YBX1-202ENST00000332220 CLTCL1P53675 1640 aa31.11■■■□□ 2.57
YBX1-202ENST00000332220 ADGRB3O60242 1522 aa31.1■■■□□ 2.57
YBX1-202ENST00000332220 PLA2R1Q13018 1463 aa31.09■■■□□ 2.57
YBX1-202ENST00000332220 FOXD1Q16676 465 aa31.08■■■□□ 2.57
YBX1-202ENST00000332220 SLC52A1Q9NWF4 448 aa31.08■■■□□ 2.57
YBX1-202ENST00000332220 TMEM131LA2VDJ0 1609 aa31.08■■■□□ 2.57
YBX1-202ENST00000332220 KIF1BO60333 1816 aa31.08■■■□□ 2.57
YBX1-202ENST00000332220 THEMISQ8N1K5 641 aaPredicted RBP31.03■■■□□ 2.56
YBX1-202ENST00000332220 SLIT1O75093 1534 aa30.99■■■□□ 2.55
YBX1-202ENST00000332220 NEURL4Q96JN8 1562 aa30.99■■■□□ 2.55
YBX1-202ENST00000332220 ARHGAP23Q9P227 1491 aa30.98■■■□□ 2.55
YBX1-202ENST00000332220 STAG3Q9UJ98 1225 aa30.98■■■□□ 2.55
YBX1-202ENST00000332220 NCKAP5LQ9HCH0 1330 aa30.97■■■□□ 2.55
YBX1-202ENST00000332220 CHGAP10645 457 aaKnown RBP30.92■■■□□ 2.54
YBX1-202ENST00000332220 TMEM2Q9UHN6 1383 aa30.92■■■□□ 2.54
YBX1-202ENST00000332220 IQGAP1P46940 1657 aa30.89■■■□□ 2.54
YBX1-202ENST00000332220 ANKLE2Q86XL3 938 aa30.88■■■□□ 2.53
YBX1-202ENST00000332220 SCAF11Q99590 1463 aaKnown RBP30.88■■■□□ 2.53
YBX1-202ENST00000332220 PCGF6Q9BYE7 350 aa30.87■■■□□ 2.53
YBX1-202ENST00000332220 CCDC144AA2RUR9 1427 aa30.87■■■□□ 2.53
YBX1-202ENST00000332220 ZFYVE9O95405 1425 aa30.87■■■□□ 2.53
YBX1-202ENST00000332220 MED14O60244 1454 aa30.85■■■□□ 2.53
YBX1-202ENST00000332220 ANKRD30BQ9BXX2 1392 aa30.85■■■□□ 2.53
YBX1-202ENST00000332220 LTKP29376 864 aa30.85■■■□□ 2.53
YBX1-202ENST00000332220 RIMS2Q9UQ26 1411 aa30.84■■■□□ 2.53
YBX1-202ENST00000332220 TXNDC2Q86VQ3 553 aa30.82■■■□□ 2.52
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms