RNA–Protein interactions for RNA: ENST00000331450.9

LRRC28-202, Transcript of leucine rich repeat containing 28, humanhuman

TSL 1 (best) BASIC

Gene LRRC28, Length 752 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-202ENST00000331450 UNC13BO14795 1591 aa24.3■■□□□ 1.48
LRRC28-202ENST00000331450 FAM135AQ9P2D6 1515 aa24.29■■□□□ 1.48
LRRC28-202ENST00000331450 ZC3H13Q5T200 1668 aaKnown RBP24.27■■□□□ 1.48
LRRC28-202ENST00000331450 MROH2AA6NES4 1674 aa24.27■■□□□ 1.48
LRRC28-202ENST00000331450 RIMS1Q86UR5 1692 aaKnown RBP24.27■■□□□ 1.48
LRRC28-202ENST00000331450 CLTCQ00610 1675 aaKnown RBP24.25■■□□□ 1.47
LRRC28-202ENST00000331450 KIF3BO15066 747 aa24.25■■□□□ 1.47
LRRC28-202ENST00000331450 VWDEQ8N2E2 1590 aa24.25■■□□□ 1.47
LRRC28-202ENST00000331450 CEP152O94986 1710 aa24.24■■□□□ 1.47
LRRC28-202ENST00000331450 KDM5DQ9BY66 1539 aa24.23■■□□□ 1.47
LRRC28-202ENST00000331450 MLECQ14165 292 aa24.21■■□□□ 1.47
LRRC28-202ENST00000331450 KDM4FA0A1W2PPD8 638 aa24.19■■□□□ 1.46
LRRC28-202ENST00000331450 IQGAP3Q86VI3 1631 aa24.19■■□□□ 1.46
LRRC28-202ENST00000331450 ABCC3O15438 1527 aa24.19■■□□□ 1.46
LRRC28-202ENST00000331450 C3P01024 1663 aa24.18■■□□□ 1.46
LRRC28-202ENST00000331450 TRIM26Q12899 539 aaPredicted RBP24.18■■□□□ 1.46
LRRC28-202ENST00000331450 CAMSAP1Q5T5Y3 1602 aa24.17■■□□□ 1.46
LRRC28-202ENST00000331450 GGT6Q6P531 493 aa24.17■■□□□ 1.46
LRRC28-202ENST00000331450 CNTLNQ9NXG0 1405 aa24.17■■□□□ 1.46
LRRC28-202ENST00000331450 PPP6R1Q9UPN7 881 aa24.16■■□□□ 1.46
LRRC28-202ENST00000331450 LMTK2Q8IWU2 1503 aa24.15■■□□□ 1.46
LRRC28-202ENST00000331450 SETD5Q9C0A6 1442 aa24.14■■□□□ 1.45
LRRC28-202ENST00000331450 TET3O43151 1660 aa24.13■■□□□ 1.45
LRRC28-202ENST00000331450 PTPRMP28827 1452 aa24.13■■□□□ 1.45
LRRC28-202ENST00000331450 EFCAB6Q5THR3 1501 aa24.1■■□□□ 1.45
LRRC28-202ENST00000331450 KANK1Q14678 1352 aa24.09■■□□□ 1.45
LRRC28-202ENST00000331450 RAB3GAP2Q9H2M9 1393 aa24.07■■□□□ 1.44
LRRC28-202ENST00000331450 WASHC2CQ9Y4E1 1318 aa24.06■■□□□ 1.44
LRRC28-202ENST00000331450 E9PCH4 1651 aa24.05■■□□□ 1.44
LRRC28-202ENST00000331450 PZPP20742 1482 aa24.05■■□□□ 1.44
LRRC28-202ENST00000331450 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.04■■□□□ 1.44
LRRC28-202ENST00000331450 ZMYM3Q14202 1370 aa24.03■■□□□ 1.44
LRRC28-202ENST00000331450 ARHGAP31Q2M1Z3 1444 aa24.03■■□□□ 1.44
LRRC28-202ENST00000331450 PREX1Q8TCU6 1659 aa24.03■■□□□ 1.44
LRRC28-202ENST00000331450 ESF1Q9H501 851 aaKnown RBP24.03■■□□□ 1.44
LRRC28-202ENST00000331450 NUP155O75694 1391 aa24.03■■□□□ 1.44
LRRC28-202ENST00000331450 NPATQ14207 1427 aa24■■□□□ 1.43
LRRC28-202ENST00000331450 SPATA31D1Q6ZQQ2 1576 aa23.99■■□□□ 1.43
LRRC28-202ENST00000331450 RPRD2Q5VT52 1461 aaKnown RBP23.99■■□□□ 1.43
LRRC28-202ENST00000331450 HRCP23327 699 aa23.97■■□□□ 1.43
LRRC28-202ENST00000331450 CFAP65Q6ZU64 1925 aaKnown RBP23.97■■□□□ 1.43
LRRC28-202ENST00000331450 ACIN1Q9UKV3 1341 aaKnown RBP23.97■■□□□ 1.43
LRRC28-202ENST00000331450 ERVK-7P63135 1459 aa23.95■■□□□ 1.42
LRRC28-202ENST00000331450 CEBPAP49715 358 aaPredicted RBP23.95■■□□□ 1.42
LRRC28-202ENST00000331450 MYO3AQ8NEV4 1616 aa23.95■■□□□ 1.42
LRRC28-202ENST00000331450 SPHKAPQ2M3C7 1700 aa23.94■■□□□ 1.42
LRRC28-202ENST00000331450 SYNMO15061 1565 aa23.92■■□□□ 1.42
LRRC28-202ENST00000331450 TRIM52Q96A61 297 aa23.92■■□□□ 1.42
LRRC28-202ENST00000331450 SETD1BQ9UPS6 1966 aaKnown RBP23.92■■□□□ 1.42
LRRC28-202ENST00000331450 ZNF142P52746 1687 aaPredicted RBP23.92■■□□□ 1.42
LRRC28-202ENST00000331450 NOS1P29475 1434 aa23.9■■□□□ 1.42
LRRC28-202ENST00000331450 PIK3C2BO00750 1634 aa23.88■■□□□ 1.41
LRRC28-202ENST00000331450 FBXO31Q5XUX0 539 aaPredicted RBP23.87■■□□□ 1.41
LRRC28-202ENST00000331450 PLPPR3Q6T4P5 718 aa23.85■■□□□ 1.41
LRRC28-202ENST00000331450 PCGF6Q9BYE7 350 aa23.85■■□□□ 1.41
LRRC28-202ENST00000331450 TNRQ92752 1358 aa23.84■■□□□ 1.41
LRRC28-202ENST00000331450 SLC4A1APQ9BWU0 796 aaKnown RBP23.84■■□□□ 1.41
LRRC28-202ENST00000331450 TRPM2O94759 1503 aa23.84■■□□□ 1.41
LRRC28-202ENST00000331450 CEP170BQ9Y4F5 1589 aaPredicted RBP23.83■■□□□ 1.41
LRRC28-202ENST00000331450 MPHOSPH9Q99550 1183 aa23.83■■□□□ 1.41
LRRC28-202ENST00000331450 PTPRTO14522 1441 aa23.83■■□□□ 1.4
LRRC28-202ENST00000331450 KDM5AP29375 1690 aaKnown RBP23.82■■□□□ 1.4
LRRC28-202ENST00000331450 NLRP1Q9C000 1473 aa23.81■■□□□ 1.4
LRRC28-202ENST00000331450 LMTK3Q96Q04 1460 aa23.81■■□□□ 1.4
LRRC28-202ENST00000331450 PKD2Q13563 968 aa23.8■■□□□ 1.4
LRRC28-202ENST00000331450 PLA2R1Q13018 1463 aa23.8■■□□□ 1.4
LRRC28-202ENST00000331450 UBR1Q8IWV7 1749 aa23.79■■□□□ 1.4
LRRC28-202ENST00000331450 UGGT1Q9NYU2 1555 aa23.79■■□□□ 1.4
LRRC28-202ENST00000331450 UHRF1BP1Q6BDS2 1440 aa23.79■■□□□ 1.4
LRRC28-202ENST00000331450 CLTCL1P53675 1640 aa23.79■■□□□ 1.4
LRRC28-202ENST00000331450 A2ML1A8K2U0 1454 aa23.77■■□□□ 1.4
LRRC28-202ENST00000331450 MYO5BQ9ULV0 1848 aa23.75■■□□□ 1.39
LRRC28-202ENST00000331450 ADGRB3O60242 1522 aa23.74■■□□□ 1.39
LRRC28-202ENST00000331450 AEBP2Q6ZN18 517 aaPredicted RBP23.73■■□□□ 1.39
LRRC28-202ENST00000331450 TMEM131LA2VDJ0 1609 aa23.73■■□□□ 1.39
LRRC28-202ENST00000331450 KIF1BO60333 1816 aa23.72■■□□□ 1.39
LRRC28-202ENST00000331450 FOXD1Q16676 465 aa23.71■■□□□ 1.39
LRRC28-202ENST00000331450 DHX57Q6P158 1386 aaKnown RBP23.7■■□□□ 1.38
LRRC28-202ENST00000331450 SLC52A1Q9NWF4 448 aa23.68■■□□□ 1.38
LRRC28-202ENST00000331450 IDI1Q13907 227 aa23.67■■□□□ 1.38
LRRC28-202ENST00000331450 ANKRD30BQ9BXX2 1392 aa23.66■■□□□ 1.38
LRRC28-202ENST00000331450 POLR1AO95602 1720 aaPredicted RBP23.64■■□□□ 1.38
LRRC28-202ENST00000331450 NEURL4Q96JN8 1562 aa23.64■■□□□ 1.37
LRRC28-202ENST00000331450 CCDC144AA2RUR9 1427 aa23.63■■□□□ 1.37
LRRC28-202ENST00000331450 SLIT1O75093 1534 aa23.63■■□□□ 1.37
LRRC28-202ENST00000331450 STRCQ7RTU9 1775 aa23.62■■□□□ 1.37
LRRC28-202ENST00000331450 ARHGAP23Q9P227 1491 aa23.61■■□□□ 1.37
LRRC28-202ENST00000331450 IFT172Q9UG01 1749 aa23.59■■□□□ 1.37
LRRC28-202ENST00000331450 SPATA31E1Q6ZUB1 1445 aa23.57■■□□□ 1.36
LRRC28-202ENST00000331450 PPLO60437 1756 aa23.56■■□□□ 1.36
LRRC28-202ENST00000331450 HSPA2P54652 639 aa23.56■■□□□ 1.36
LRRC28-202ENST00000331450 NEXMIFQ5QGS0 1516 aa23.54■■□□□ 1.36
LRRC28-202ENST00000331450 ZFYVE9O95405 1425 aa23.54■■□□□ 1.36
LRRC28-202ENST00000331450 THEMISQ8N1K5 641 aaPredicted RBP23.54■■□□□ 1.36
LRRC28-202ENST00000331450 TMEM2Q9UHN6 1383 aa23.53■■□□□ 1.36
LRRC28-202ENST00000331450 STAG3Q9UJ98 1225 aa23.5■■□□□ 1.35
LRRC28-202ENST00000331450 SCAF11Q99590 1463 aaKnown RBP23.49■■□□□ 1.35
LRRC28-202ENST00000331450 RIMS2Q9UQ26 1411 aa23.48■■□□□ 1.35
LRRC28-202ENST00000331450 MED14O60244 1454 aa23.48■■□□□ 1.35
LRRC28-202ENST00000331450 IQGAP1P46940 1657 aa23.48■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms