RNA–Protein interactions for RNA: ENST00000329913.3

GDF3-201, Transcript of growth differentiation factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GDF3, Length 1,239 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GDF3-201ENST00000329913 UBAP1LF5GYI3 381 aa15.19■□□□□ 0.02
GDF3-201ENST00000329913 PLEKHH2Q8IVE3 1493 aa15.18■□□□□ 0.02
GDF3-201ENST00000329913 ZNF142P52746 1687 aaPredicted RBP15.18■□□□□ 0.02
GDF3-201ENST00000329913 FBXO31Q5XUX0 539 aaPredicted RBP15.17■□□□□ 0.02
GDF3-201ENST00000329913 MBD5Q9P267 1494 aa15.16■□□□□ 0.02
GDF3-201ENST00000329913 EHBP1L1Q8N3D4 1523 aa15.16■□□□□ 0.02
GDF3-201ENST00000329913 SOCS7O14512 581 aa15.15■□□□□ 0.02
GDF3-201ENST00000329913 ADGBQ8N7X0 1667 aa15.15■□□□□ 0.02
GDF3-201ENST00000329913 TCOF1Q13428 1488 aaKnown RBP15.14■□□□□ 0.01
GDF3-201ENST00000329913 CEP162Q5TB80 1403 aa15.12■□□□□ 0.01
GDF3-201ENST00000329913 KIF3BO15066 747 aa15.12■□□□□ 0.01
GDF3-201ENST00000329913 DNMT1P26358 1616 aaKnown RBP15.12■□□□□ 0.01
GDF3-201ENST00000329913 CAMSAP2Q08AD1 1489 aa15.12■□□□□ 0.01
GDF3-201ENST00000329913 PLA2R1Q13018 1463 aa15.12■□□□□ 0.01
GDF3-201ENST00000329913 PIP4K2BP78356 416 aa15.11■□□□□ 0.01
GDF3-201ENST00000329913 A2ML1A8K2U0 1454 aa15.11■□□□□ 0.01
GDF3-201ENST00000329913 IQSEC2Q5JU85 1478 aa15.11■□□□□ 0.01
GDF3-201ENST00000329913 NCOA2Q15596 1464 aa15.1■□□□□ 0.01
GDF3-201ENST00000329913 PKD2Q13563 968 aa15.1■□□□□ 0.01
GDF3-201ENST00000329913 DHX29Q7Z478 1369 aaKnown RBP15.1■□□□□ 0.01
GDF3-201ENST00000329913 TNRQ92752 1358 aa15.1■□□□□ 0.01
GDF3-201ENST00000329913 CCDC141Q6ZP82 1450 aa15.09■□□□□ 0.01
GDF3-201ENST00000329913 NEURL4Q96JN8 1562 aa15.09■□□□□ 0.01
GDF3-201ENST00000329913 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.08■□□□□ 0
GDF3-201ENST00000329913 KDM5DQ9BY66 1539 aa15.07■□□□□ 0
GDF3-201ENST00000329913 HSPA1LP34931 641 aa15.06■□□□□ 0
GDF3-201ENST00000329913 WASHC2CQ9Y4E1 1318 aa15.06■□□□□ 0
GDF3-201ENST00000329913 RTEL1-TNFRSF6BF6WH68 1400 aa15.06■□□□□ 0
GDF3-201ENST00000329913 POLR1AO95602 1720 aaPredicted RBP15.06■□□□□ 0
GDF3-201ENST00000329913 PZPP20742 1482 aa15.05■□□□□ -0
GDF3-201ENST00000329913 SHANK2Q9UPX8 1470 aa15.01□□□□□ -0.01
GDF3-201ENST00000329913 LOC105371045A0A1W2PR82 267 aa15.01□□□□□ -0.01
GDF3-201ENST00000329913 VWDEQ8N2E2 1590 aa15□□□□□ -0.01
GDF3-201ENST00000329913 MIA2Q96PC5 1412 aa15□□□□□ -0.01
GDF3-201ENST00000329913 UGGT1Q9NYU2 1555 aa14.99□□□□□ -0.01
GDF3-201ENST00000329913 KANK4Q5T7N3 995 aaPredicted RBP14.99□□□□□ -0.01
GDF3-201ENST00000329913 NPHP4O75161 1426 aaPredicted RBP14.99□□□□□ -0.01
GDF3-201ENST00000329913 MED1Q15648 1581 aaPredicted RBP14.98□□□□□ -0.01
GDF3-201ENST00000329913 ABCC3O15438 1527 aa14.98□□□□□ -0.01
GDF3-201ENST00000329913 ANKLE2Q86XL3 938 aa14.98□□□□□ -0.01
GDF3-201ENST00000329913 ALKQ9UM73 1620 aa14.98□□□□□ -0.01
GDF3-201ENST00000329913 ARHGEF5Q12774 1597 aa14.98□□□□□ -0.01
GDF3-201ENST00000329913 LRRC9Q6ZRR7 1453 aa14.96□□□□□ -0.01
GDF3-201ENST00000329913 STRCP1A6NGW2 1772 aa14.96□□□□□ -0.01
GDF3-201ENST00000329913 CEP152O94986 1710 aa14.96□□□□□ -0.01
GDF3-201ENST00000329913 TSPY4P0CV99 314 aa14.96□□□□□ -0.01
GDF3-201ENST00000329913 TSPY10P0CW01 314 aa14.96□□□□□ -0.01
GDF3-201ENST00000329913 CPS1P31327 1500 aa14.96□□□□□ -0.02
GDF3-201ENST00000329913 FAM135AQ9P2D6 1515 aa14.96□□□□□ -0.02
GDF3-201ENST00000329913 MROH1Q8NDA8 1641 aa14.95□□□□□ -0.02
GDF3-201ENST00000329913 THEMISQ8N1K5 641 aaPredicted RBP14.94□□□□□ -0.02
GDF3-201ENST00000329913 RNF17Q9BXT8 1623 aaKnown RBP14.94□□□□□ -0.02
GDF3-201ENST00000329913 ERVK-7P63135 1459 aa14.94□□□□□ -0.02
GDF3-201ENST00000329913 NLRP1Q9C000 1473 aa14.94□□□□□ -0.02
GDF3-201ENST00000329913 IQGAP1P46940 1657 aa14.93□□□□□ -0.02
GDF3-201ENST00000329913 TOM1O60784 492 aa14.93□□□□□ -0.02
GDF3-201ENST00000329913 CFAP65Q6ZU64 1925 aaKnown RBP14.93□□□□□ -0.02
GDF3-201ENST00000329913 VPS8Q8N3P4 1428 aa14.92□□□□□ -0.02
GDF3-201ENST00000329913 MAST1Q9Y2H9 1570 aa14.9□□□□□ -0.02
GDF3-201ENST00000329913 MED14O60244 1454 aa14.9□□□□□ -0.02
GDF3-201ENST00000329913 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.9□□□□□ -0.02
GDF3-201ENST00000329913 DEPDC5O75140 1603 aa14.9□□□□□ -0.02
GDF3-201ENST00000329913 LRRC7Q96NW7 1537 aa14.9□□□□□ -0.02
GDF3-201ENST00000329913 RSPH4AQ5TD94 716 aa14.89□□□□□ -0.03
GDF3-201ENST00000329913 ZC3H13Q5T200 1668 aaKnown RBP14.88□□□□□ -0.03
GDF3-201ENST00000329913 RRP7BPQ9NSQ0 103 aa14.88□□□□□ -0.03
GDF3-201ENST00000329913 MYOM3Q5VTT5 1437 aa14.88□□□□□ -0.03
GDF3-201ENST00000329913 UBR1Q8IWV7 1749 aa14.88□□□□□ -0.03
GDF3-201ENST00000329913 LTKP29376 864 aa14.87□□□□□ -0.03
GDF3-201ENST00000329913 EIF2AK4Q9P2K8 1649 aaKnown RBP14.87□□□□□ -0.03
GDF3-201ENST00000329913 RBM33Q96EV2 1170 aaKnown RBP14.86□□□□□ -0.03
GDF3-201ENST00000329913 KIF15Q9NS87 1388 aa14.85□□□□□ -0.03
GDF3-201ENST00000329913 SCAF11Q99590 1463 aaKnown RBP14.85□□□□□ -0.03
GDF3-201ENST00000329913 DUOX2Q9NRD8 1548 aa14.84□□□□□ -0.03
GDF3-201ENST00000329913 CHIC2Q9UKJ5 165 aa14.84□□□□□ -0.03
GDF3-201ENST00000329913 ABCC5O15440 1437 aa14.83□□□□□ -0.03
GDF3-201ENST00000329913 TXNDC2Q86VQ3 553 aa14.83□□□□□ -0.04
GDF3-201ENST00000329913 PIK3C2BO00750 1634 aa14.83□□□□□ -0.04
GDF3-201ENST00000329913 SYNMO15061 1565 aa14.82□□□□□ -0.04
GDF3-201ENST00000329913 CROCC2H7BZ55 1655 aa14.82□□□□□ -0.04
GDF3-201ENST00000329913 PRDM15P57071 1507 aaPredicted RBP14.82□□□□□ -0.04
GDF3-201ENST00000329913 PTPN23Q9H3S7 1636 aa14.81□□□□□ -0.04
GDF3-201ENST00000329913 ARHGAP23Q9P227 1491 aa14.8□□□□□ -0.04
GDF3-201ENST00000329913 XIRP1Q702N8 1843 aaKnown RBP14.8□□□□□ -0.04
GDF3-201ENST00000329913 DAPK1P53355 1430 aa14.79□□□□□ -0.04
GDF3-201ENST00000329913 SLIT1O75093 1534 aa14.78□□□□□ -0.04
GDF3-201ENST00000329913 STAG3Q9UJ98 1225 aa14.78□□□□□ -0.04
GDF3-201ENST00000329913 SLC26A8Q96RN1 970 aa14.77□□□□□ -0.05
GDF3-201ENST00000329913 ERBINQ96RT1 1412 aa14.76□□□□□ -0.05
GDF3-201ENST00000329913 RGS17Q9UGC6 210 aaPredicted RBP14.76□□□□□ -0.05
GDF3-201ENST00000329913 MAP3K1Q13233 1512 aa14.76□□□□□ -0.05
GDF3-201ENST00000329913 TMEM94Q12767 1356 aa14.75□□□□□ -0.05
GDF3-201ENST00000329913 TMEM2Q9UHN6 1383 aa14.75□□□□□ -0.05
GDF3-201ENST00000329913 EID1Q9Y6B2 187 aa14.75□□□□□ -0.05
GDF3-201ENST00000329913 ARHGAP31Q2M1Z3 1444 aa14.75□□□□□ -0.05
GDF3-201ENST00000329913 FGD6Q6ZV73 1430 aa14.75□□□□□ -0.05
GDF3-201ENST00000329913 IDI1Q13907 227 aa14.74□□□□□ -0.05
GDF3-201ENST00000329913 EFCAB6Q5THR3 1501 aa14.73□□□□□ -0.05
GDF3-201ENST00000329913 KANK1Q14678 1352 aa14.73□□□□□ -0.05
GDF3-201ENST00000329913 BCANQ96GW7 911 aa14.72□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms