RNA–Protein interactions for RNA: ENST00000329305.6

TPM2-201, Transcript of tropomyosin 2, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene TPM2, Length 1,018 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM2-201ENST00000329305 EIF2AK4Q9P2K8 1649 aaKnown RBP25.07■■□□□ 1.6
TPM2-201ENST00000329305 PTPRKQ15262 1439 aa25.06■■□□□ 1.6
TPM2-201ENST00000329305 ROCK1Q13464 1354 aa25.04■■□□□ 1.6
TPM2-201ENST00000329305 FAM135AQ9P2D6 1515 aa25.01■■□□□ 1.59
TPM2-201ENST00000329305 WASHC2CQ9Y4E1 1318 aa25■■□□□ 1.59
TPM2-201ENST00000329305 RNF17Q9BXT8 1623 aaKnown RBP25■■□□□ 1.59
TPM2-201ENST00000329305 CEBPAP49715 358 aaPredicted RBP24.99■■□□□ 1.59
TPM2-201ENST00000329305 KDM5DQ9BY66 1539 aa24.98■■□□□ 1.59
TPM2-201ENST00000329305 ANKRD50Q9ULJ7 1429 aa24.98■■□□□ 1.59
TPM2-201ENST00000329305 ZMYM3Q14202 1370 aa24.98■■□□□ 1.59
TPM2-201ENST00000329305 MROH2AA6NES4 1674 aa24.97■■□□□ 1.59
TPM2-201ENST00000329305 CLTCQ00610 1675 aaKnown RBP24.97■■□□□ 1.59
TPM2-201ENST00000329305 KANK1Q14678 1352 aa24.93■■□□□ 1.58
TPM2-201ENST00000329305 C3P01024 1663 aa24.93■■□□□ 1.58
TPM2-201ENST00000329305 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.92■■□□□ 1.587e-7■■■■□ 21.8
TPM2-201ENST00000329305 PRDM15P57071 1507 aaPredicted RBP24.91■■□□□ 1.58
TPM2-201ENST00000329305 MROH1Q8NDA8 1641 aa24.9■■□□□ 1.58
TPM2-201ENST00000329305 ZC3H13Q5T200 1668 aaKnown RBP24.9■■□□□ 1.58
TPM2-201ENST00000329305 ABCC3O15438 1527 aa24.89■■□□□ 1.57
TPM2-201ENST00000329305 DEPDC5O75140 1603 aa24.89■■□□□ 1.57
TPM2-201ENST00000329305 NPATQ14207 1427 aa24.88■■□□□ 1.57
TPM2-201ENST00000329305 PZPP20742 1482 aa24.84■■□□□ 1.57
TPM2-201ENST00000329305 UHRF1BP1Q6BDS2 1440 aa24.84■■□□□ 1.57
TPM2-201ENST00000329305 HFM1A2PYH4 1435 aa24.81■■□□□ 1.56
TPM2-201ENST00000329305 LMTK3Q96Q04 1460 aa24.81■■□□□ 1.56
TPM2-201ENST00000329305 PREX1Q8TCU6 1659 aa24.81■■□□□ 1.56
TPM2-201ENST00000329305 CEP152O94986 1710 aa24.81■■□□□ 1.56
TPM2-201ENST00000329305 NAIPQ13075 1403 aa24.8■■□□□ 1.56
TPM2-201ENST00000329305 VWDEQ8N2E2 1590 aa24.79■■□□□ 1.56
TPM2-201ENST00000329305 CAMSAP1Q5T5Y3 1602 aa24.79■■□□□ 1.56
TPM2-201ENST00000329305 LMTK2Q8IWU2 1503 aa24.78■■□□□ 1.56
TPM2-201ENST00000329305 UNC13BO14795 1591 aa24.78■■□□□ 1.56
TPM2-201ENST00000329305 SETD1BQ9UPS6 1966 aaKnown RBP24.78■■□□□ 1.56
TPM2-201ENST00000329305 FBXO31Q5XUX0 539 aaPredicted RBP24.77■■□□□ 1.56
TPM2-201ENST00000329305 GCC2Q8IWJ2 1684 aa24.77■■□□□ 1.56
TPM2-201ENST00000329305 ARHGAP31Q2M1Z3 1444 aa24.77■■□□□ 1.56
TPM2-201ENST00000329305 TNRQ92752 1358 aa24.76■■□□□ 1.55
TPM2-201ENST00000329305 NUP155O75694 1391 aa24.74■■□□□ 1.55
TPM2-201ENST00000329305 ERVK-7P63135 1459 aa24.71■■□□□ 1.55
TPM2-201ENST00000329305 HSPA2P54652 639 aa24.71■■□□□ 1.55
TPM2-201ENST00000329305 EFCAB6Q5THR3 1501 aa24.71■■□□□ 1.55
TPM2-201ENST00000329305 MYO3AQ8NEV4 1616 aa24.7■■□□□ 1.54
TPM2-201ENST00000329305 SPATA31D1Q6ZQQ2 1576 aa24.7■■□□□ 1.54
TPM2-201ENST00000329305 IQGAP3Q86VI3 1631 aa24.68■■□□□ 1.54
TPM2-201ENST00000329305 TET3O43151 1660 aa24.67■■□□□ 1.54
TPM2-201ENST00000329305 RPRD2Q5VT52 1461 aaKnown RBP24.66■■□□□ 1.54
TPM2-201ENST00000329305 NLRP1Q9C000 1473 aa24.66■■□□□ 1.54
TPM2-201ENST00000329305 TRIM52Q96A61 297 aa24.66■■□□□ 1.54
TPM2-201ENST00000329305 CEP170BQ9Y4F5 1589 aaPredicted RBP24.66■■□□□ 1.54
TPM2-201ENST00000329305 A2ML1A8K2U0 1454 aa24.64■■□□□ 1.54
TPM2-201ENST00000329305 ZNF142P52746 1687 aaPredicted RBP24.64■■□□□ 1.53
TPM2-201ENST00000329305 SETD5Q9C0A6 1442 aa24.62■■□□□ 1.53
TPM2-201ENST00000329305 ACIN1Q9UKV3 1341 aaKnown RBP24.61■■□□□ 1.53
TPM2-201ENST00000329305 NOS1P29475 1434 aa24.59■■□□□ 1.53
TPM2-201ENST00000329305 CFAP65Q6ZU64 1925 aaKnown RBP24.57■■□□□ 1.52
TPM2-201ENST00000329305 UGGT1Q9NYU2 1555 aa24.57■■□□□ 1.52
TPM2-201ENST00000329305 THEMISQ8N1K5 641 aaPredicted RBP24.56■■□□□ 1.52
TPM2-201ENST00000329305 E9PCH4 1651 aa24.54■■□□□ 1.52
TPM2-201ENST00000329305 SLC4A1APQ9BWU0 796 aaKnown RBP24.54■■□□□ 1.52
TPM2-201ENST00000329305 SLC52A1Q9NWF4 448 aa24.54■■□□□ 1.52
TPM2-201ENST00000329305 PLA2R1Q13018 1463 aa24.53■■□□□ 1.52
TPM2-201ENST00000329305 STAG3Q9UJ98 1225 aa24.53■■□□□ 1.52
TPM2-201ENST00000329305 RAB3GAP2Q9H2M9 1393 aa24.53■■□□□ 1.52
TPM2-201ENST00000329305 SYNMO15061 1565 aa24.52■■□□□ 1.52
TPM2-201ENST00000329305 DMRT2Q9Y5R5 561 aa24.52■■□□□ 1.52
TPM2-201ENST00000329305 IDI1Q13907 227 aa24.5■■□□□ 1.51
TPM2-201ENST00000329305 PKD2Q13563 968 aa24.49■■□□□ 1.51
TPM2-201ENST00000329305 PIK3C2BO00750 1634 aa24.46■■□□□ 1.51
TPM2-201ENST00000329305 NCKAP5LQ9HCH0 1330 aa24.45■■□□□ 1.5
TPM2-201ENST00000329305 ANKLE2Q86XL3 938 aa24.45■■□□□ 1.5
TPM2-201ENST00000329305 UBR1Q8IWV7 1749 aa24.44■■□□□ 1.5
TPM2-201ENST00000329305 HRCP23327 699 aa24.44■■□□□ 1.5
TPM2-201ENST00000329305 MPHOSPH9Q99550 1183 aa24.44■■□□□ 1.5
TPM2-201ENST00000329305 STRCQ7RTU9 1775 aa24.44■■□□□ 1.5
TPM2-201ENST00000329305 PTPRTO14522 1441 aa24.44■■□□□ 1.5
TPM2-201ENST00000329305 ADGRB3O60242 1522 aa24.42■■□□□ 1.5
TPM2-201ENST00000329305 TRIM26Q12899 539 aaPredicted RBP24.42■■□□□ 1.5
TPM2-201ENST00000329305 SPHKAPQ2M3C7 1700 aa24.41■■□□□ 1.5
TPM2-201ENST00000329305 KDM5AP29375 1690 aaKnown RBP24.41■■□□□ 1.5
TPM2-201ENST00000329305 CHGAP10645 457 aaKnown RBP24.4■■□□□ 1.5
TPM2-201ENST00000329305 EID1Q9Y6B2 187 aa24.39■■□□□ 1.49
TPM2-201ENST00000329305 TRPM2O94759 1503 aa24.39■■□□□ 1.49
TPM2-201ENST00000329305 TMEM2Q9UHN6 1383 aa24.38■■□□□ 1.49
TPM2-201ENST00000329305 SLIT1O75093 1534 aa24.37■■□□□ 1.49
TPM2-201ENST00000329305 ARHGAP23Q9P227 1491 aa24.36■■□□□ 1.49
TPM2-201ENST00000329305 FOXD1Q16676 465 aa24.35■■□□□ 1.49
TPM2-201ENST00000329305 TXNDC2Q86VQ3 553 aa24.35■■□□□ 1.49
TPM2-201ENST00000329305 POLR1AO95602 1720 aaPredicted RBP24.35■■□□□ 1.49
TPM2-201ENST00000329305 SCAF11Q99590 1463 aaKnown RBP24.34■■□□□ 1.49
TPM2-201ENST00000329305 HDGFP51858 240 aaKnown RBP24.33■■□□□ 1.49
TPM2-201ENST00000329305 TMEM131LA2VDJ0 1609 aa24.32■■□□□ 1.48
TPM2-201ENST00000329305 NPHP4O75161 1426 aaPredicted RBP24.32■■□□□ 1.48
TPM2-201ENST00000329305 MED14O60244 1454 aa24.32■■□□□ 1.48
TPM2-201ENST00000329305 NEURL4Q96JN8 1562 aa24.31■■□□□ 1.48
TPM2-201ENST00000329305 CCDC144AA2RUR9 1427 aa24.29■■□□□ 1.48
TPM2-201ENST00000329305 CLTCL1P53675 1640 aa24.29■■□□□ 1.48
TPM2-201ENST00000329305 LTKP29376 864 aa24.29■■□□□ 1.48
TPM2-201ENST00000329305 PPP1R15AO75807 674 aaPredicted RBP24.28■■□□□ 1.48
TPM2-201ENST00000329305 ABCF1Q8NE71 845 aaKnown RBP eCLIP24.28■■□□□ 1.48
TPM2-201ENST00000329305 RIMS2Q9UQ26 1411 aa24.27■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms