RNA–Protein interactions for RNA: ENST00000328945.6

SDR42E1-201, Transcript of short chain dehydrogenase/reductase family 42E, member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDR42E1, Length 11,566 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR42E1-201ENST00000328945 HMGN5P82970 282 aaKnown RBP6.65□□□□□ -1.35
SDR42E1-201ENST00000328945 MYO9BQ13459 2157 aa6.64□□□□□ -1.35
SDR42E1-201ENST00000328945 SETD1BQ9UPS6 1966 aaKnown RBP6.64□□□□□ -1.35
SDR42E1-201ENST00000328945 ROCK2O75116 1388 aaKnown RBP6.64□□□□□ -1.35
SDR42E1-201ENST00000328945 G3V3G9 751 aa6.64□□□□□ -1.35
SDR42E1-201ENST00000328945 ST18O60284 1047 aa6.64□□□□□ -1.35
SDR42E1-201ENST00000328945 DCAF8Q5TAQ9 597 aa6.64□□□□□ -1.35
SDR42E1-201ENST00000328945 ARGLU1Q9NWB6 273 aaPredicted RBP6.64□□□□□ -1.35
SDR42E1-201ENST00000328945 IPO8O15397 1037 aaKnown RBP6.64□□□□□ -1.35
SDR42E1-201ENST00000328945 HSPA5P11021 654 aaKnown RBP6.63□□□□□ -1.35
SDR42E1-201ENST00000328945 CC2D1BQ5T0F9 858 aaKnown RBP6.63□□□□□ -1.35
SDR42E1-201ENST00000328945 KLHL34Q8N239 644 aa6.63□□□□□ -1.35
SDR42E1-201ENST00000328945 ATP6V1DQ9Y5K8 247 aa6.63□□□□□ -1.35
SDR42E1-201ENST00000328945 NASPP49321 788 aaPredicted RBP6.63□□□□□ -1.35
SDR42E1-201ENST00000328945 DIAPH3Q9NSV4 1193 aa6.63□□□□□ -1.35
SDR42E1-201ENST00000328945 MSH5O43196 834 aa6.62□□□□□ -1.35
SDR42E1-201ENST00000328945 KIAA1211Q6ZU35 1233 aa6.62□□□□□ -1.35
SDR42E1-201ENST00000328945 TSPYL1Q9H0U9 437 aa6.62□□□□□ -1.35
SDR42E1-201ENST00000328945 TOP2AP11388 1531 aaKnown RBP6.62□□□□□ -1.35
SDR42E1-201ENST00000328945 RTF1Q92541 710 aaKnown RBP6.62□□□□□ -1.35
SDR42E1-201ENST00000328945 TPM3P06753 285 aa6.62□□□□□ -1.35
SDR42E1-201ENST00000328945 GNL2Q13823 731 aaKnown RBP6.62□□□□□ -1.35
SDR42E1-201ENST00000328945 EID1Q9Y6B2 187 aa6.62□□□□□ -1.35
SDR42E1-201ENST00000328945 SLC4A3P48751 1232 aa6.62□□□□□ -1.35
SDR42E1-201ENST00000328945 RRP1P56182 461 aaKnown RBP6.62□□□□□ -1.35
SDR42E1-201ENST00000328945 ARHGAP35Q9NRY4 1499 aa6.61□□□□□ -1.35
SDR42E1-201ENST00000328945 ITPRIPQ8IWB1 547 aa6.61□□□□□ -1.35
SDR42E1-201ENST00000328945 R3HCC1Q9Y3T6 440 aaKnown RBP6.61□□□□□ -1.35
SDR42E1-201ENST00000328945 CCDC173Q0VFZ6 552 aa6.61□□□□□ -1.35
SDR42E1-201ENST00000328945 CCDC70Q6NSX1 233 aa6.61□□□□□ -1.35
SDR42E1-201ENST00000328945 CHMP3Q9Y3E7 222 aa6.61□□□□□ -1.35
SDR42E1-201ENST00000328945 FHAD1B1AJZ9 1412 aa6.61□□□□□ -1.35
SDR42E1-201ENST00000328945 PDE4CQ08493 712 aa6.61□□□□□ -1.35
SDR42E1-201ENST00000328945 LTV1Q96GA3 475 aaPredicted RBP6.61□□□□□ -1.35
SDR42E1-201ENST00000328945 CCDC34Q96HJ3 373 aa6.6□□□□□ -1.35
SDR42E1-201ENST00000328945 CHMP5Q9NZZ3 219 aa6.6□□□□□ -1.35
SDR42E1-201ENST00000328945 ACBD3Q9H3P7 528 aa6.6□□□□□ -1.35
SDR42E1-201ENST00000328945 SMARCA2P51531 1590 aa6.6□□□□□ -1.35
SDR42E1-201ENST00000328945 GOLGA4Q13439 2230 aaKnown RBP6.6□□□□□ -1.35
SDR42E1-201ENST00000328945 WRNQ14191 1432 aaPredicted RBP eCLIP6.59□□□□□ -1.35
SDR42E1-201ENST00000328945 APBB1O00213 710 aa6.59□□□□□ -1.35
SDR42E1-201ENST00000328945 TAF7LQ5H9L4 462 aa6.59□□□□□ -1.35
SDR42E1-201ENST00000328945 ZNF592Q92610 1267 aa6.59□□□□□ -1.35
SDR42E1-201ENST00000328945 MORC1Q86VD1 984 aa6.59□□□□□ -1.35
SDR42E1-201ENST00000328945 RAB3GAP2Q9H2M9 1393 aa6.59□□□□□ -1.35
SDR42E1-201ENST00000328945 GTF2E1P29083 439 aaPredicted RBP6.59□□□□□ -1.35
SDR42E1-201ENST00000328945 HSP90B2PQ58FF3 399 aa6.59□□□□□ -1.35
SDR42E1-201ENST00000328945 FOXD4L1Q9NU39 408 aa6.59□□□□□ -1.35
SDR42E1-201ENST00000328945 NUTM2DQ5VT03 806 aaPredicted RBP6.59□□□□□ -1.36
SDR42E1-201ENST00000328945 CENPJQ9HC77 1338 aaPredicted RBP6.59□□□□□ -1.36
SDR42E1-201ENST00000328945 KIF15Q9NS87 1388 aa6.58□□□□□ -1.36
SDR42E1-201ENST00000328945 RDXP35241 583 aaKnown RBP6.58□□□□□ -1.36
SDR42E1-201ENST00000328945 TMF1P82094 1093 aa6.58□□□□□ -1.36
SDR42E1-201ENST00000328945 CCAR2Q8N163 923 aaKnown RBP6.58□□□□□ -1.36
SDR42E1-201ENST00000328945 CGNL1Q0VF96 1302 aa6.58□□□□□ -1.36
SDR42E1-201ENST00000328945 EVA1CP58658 441 aa6.58□□□□□ -1.36
SDR42E1-201ENST00000328945 DCAF8L1A6NGE4 600 aa6.58□□□□□ -1.36
SDR42E1-201ENST00000328945 EIF3AQ14152 1382 aaKnown RBP6.58□□□□□ -1.36
SDR42E1-201ENST00000328945 GOLGA6L19H0YKK7 550 aa6.58□□□□□ -1.36
SDR42E1-201ENST00000328945 HDGFL2Q7Z4V5 671 aaPredicted RBP6.57□□□□□ -1.36
SDR42E1-201ENST00000328945 DCAF11Q8TEB1 546 aa6.57□□□□□ -1.36
SDR42E1-201ENST00000328945 ZMYND15Q9H091 742 aa6.57□□□□□ -1.36
SDR42E1-201ENST00000328945 NUTM2FA1L443 756 aa6.57□□□□□ -1.36
SDR42E1-201ENST00000328945 NLRP13Q86W25 1043 aa6.57□□□□□ -1.36
SDR42E1-201ENST00000328945 IFT57Q9NWB7 429 aa6.57□□□□□ -1.36
SDR42E1-201ENST00000328945 CUX2O14529 1486 aa6.57□□□□□ -1.36
SDR42E1-201ENST00000328945 UQCRHLA0A096LP55 91 aa6.57□□□□□ -1.36
SDR42E1-201ENST00000328945 UQCRHP07919 91 aa6.57□□□□□ -1.36
SDR42E1-201ENST00000328945 RBM10P98175 930 aaKnown RBP6.57□□□□□ -1.36
SDR42E1-201ENST00000328945 AK7Q96M32 723 aa6.57□□□□□ -1.36
SDR42E1-201ENST00000328945 EXOC6Q8TAG9 804 aa6.56□□□□□ -1.36
SDR42E1-201ENST00000328945 CARMIL2Q6F5E8 1435 aa6.56□□□□□ -1.36
SDR42E1-201ENST00000328945 H0YHG0 523 aa6.56□□□□□ -1.36
SDR42E1-201ENST00000328945 ATAD2BQ9ULI0 1458 aa6.56□□□□□ -1.36
SDR42E1-201ENST00000328945 VPS53Q5VIR6 699 aa6.56□□□□□ -1.36
SDR42E1-201ENST00000328945 LEKR1Q6ZMV7 388 aa6.56□□□□□ -1.36
SDR42E1-201ENST00000328945 KIF3AQ9Y496 699 aa6.56□□□□□ -1.36
SDR42E1-201ENST00000328945 GORABQ5T7V8 394 aa6.56□□□□□ -1.36
SDR42E1-201ENST00000328945 MNS1Q8NEH6 495 aa6.56□□□□□ -1.36
SDR42E1-201ENST00000328945 PDCL3Q9H2J4 239 aa6.56□□□□□ -1.36
SDR42E1-201ENST00000328945 WIZO95785 1651 aa6.56□□□□□ -1.36
SDR42E1-201ENST00000328945 NGDNQ8NEJ9 315 aaKnown RBP6.56□□□□□ -1.36
SDR42E1-201ENST00000328945 BECN2A8MW95 431 aa6.56□□□□□ -1.36
SDR42E1-201ENST00000328945 ESPNB1AK53 854 aa6.56□□□□□ -1.36
SDR42E1-201ENST00000328945 MYBBP1AQ9BQG0 1328 aaKnown RBP6.55□□□□□ -1.36
SDR42E1-201ENST00000328945 CYB5RLQ6IPT4 315 aa6.55□□□□□ -1.36
SDR42E1-201ENST00000328945 FRAT2O75474 233 aaPredicted RBP6.55□□□□□ -1.36
SDR42E1-201ENST00000328945 NCAPD3P42695 1498 aa6.55□□□□□ -1.36
SDR42E1-201ENST00000328945 HMMRO75330 724 aa6.55□□□□□ -1.36
SDR42E1-201ENST00000328945 HMGXB3Q12766 1538 aa6.55□□□□□ -1.36
SDR42E1-201ENST00000328945 USP8P40818 1118 aa6.55□□□□□ -1.36
SDR42E1-201ENST00000328945 CCDC191Q8NCU4 936 aa6.55□□□□□ -1.36
SDR42E1-201ENST00000328945 DHX57Q6P158 1386 aaKnown RBP6.55□□□□□ -1.36
SDR42E1-201ENST00000328945 TPM1P09493 284 aa6.55□□□□□ -1.36
SDR42E1-201ENST00000328945 NUCB2P80303 420 aa6.54□□□□□ -1.36
SDR42E1-201ENST00000328945 DEF6Q9H4E7 631 aa6.54□□□□□ -1.36
SDR42E1-201ENST00000328945 HOMER1Q86YM7 354 aa6.54□□□□□ -1.36
SDR42E1-201ENST00000328945 HSP90B1P14625 803 aaKnown RBP6.54□□□□□ -1.36
SDR42E1-201ENST00000328945 PATL2C9JE40 543 aaKnown RBP6.54□□□□□ -1.36
SDR42E1-201ENST00000328945 FMN1Q68DA7 1419 aa6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms