RNA–Protein interactions for RNA: ENST00000328945.6

SDR42E1-201, Transcript of short chain dehydrogenase/reductase family 42E, member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDR42E1, Length 11,566 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR42E1-201ENST00000328945 HMGN5P82970 282 aaKnown RBP6.65□□□□□ -1.35
SDR42E1-201ENST00000328945 MYO9BQ13459 2157 aa6.64□□□□□ -1.35
SDR42E1-201ENST00000328945 SETD1BQ9UPS6 1966 aaKnown RBP6.64□□□□□ -1.35
SDR42E1-201ENST00000328945 ROCK2O75116 1388 aaKnown RBP6.64□□□□□ -1.35
SDR42E1-201ENST00000328945 G3V3G9 751 aa6.64□□□□□ -1.35
SDR42E1-201ENST00000328945 ST18O60284 1047 aa6.64□□□□□ -1.35
SDR42E1-201ENST00000328945 DCAF8Q5TAQ9 597 aa6.64□□□□□ -1.35
SDR42E1-201ENST00000328945 ARGLU1Q9NWB6 273 aaPredicted RBP6.64□□□□□ -1.35
SDR42E1-201ENST00000328945 IPO8O15397 1037 aaKnown RBP6.64□□□□□ -1.35
SDR42E1-201ENST00000328945 HSPA5P11021 654 aaKnown RBP6.63□□□□□ -1.35
SDR42E1-201ENST00000328945 CC2D1BQ5T0F9 858 aaKnown RBP6.63□□□□□ -1.35
SDR42E1-201ENST00000328945 KLHL34Q8N239 644 aa6.63□□□□□ -1.35
SDR42E1-201ENST00000328945 ATP6V1DQ9Y5K8 247 aa6.63□□□□□ -1.35
SDR42E1-201ENST00000328945 NASPP49321 788 aaPredicted RBP6.63□□□□□ -1.35
SDR42E1-201ENST00000328945 DIAPH3Q9NSV4 1193 aa6.63□□□□□ -1.35
SDR42E1-201ENST00000328945 MSH5O43196 834 aa6.62□□□□□ -1.35
SDR42E1-201ENST00000328945 KIAA1211Q6ZU35 1233 aa6.62□□□□□ -1.35
SDR42E1-201ENST00000328945 TSPYL1Q9H0U9 437 aa6.62□□□□□ -1.35
SDR42E1-201ENST00000328945 TOP2AP11388 1531 aaKnown RBP6.62□□□□□ -1.35
SDR42E1-201ENST00000328945 RTF1Q92541 710 aaKnown RBP6.62□□□□□ -1.35
SDR42E1-201ENST00000328945 TPM3P06753 285 aa6.62□□□□□ -1.35
SDR42E1-201ENST00000328945 GNL2Q13823 731 aaKnown RBP6.62□□□□□ -1.35
SDR42E1-201ENST00000328945 EID1Q9Y6B2 187 aa6.62□□□□□ -1.35
SDR42E1-201ENST00000328945 SLC4A3P48751 1232 aa6.62□□□□□ -1.35
SDR42E1-201ENST00000328945 RRP1P56182 461 aaKnown RBP6.62□□□□□ -1.35
SDR42E1-201ENST00000328945 ARHGAP35Q9NRY4 1499 aa6.61□□□□□ -1.35
SDR42E1-201ENST00000328945 ITPRIPQ8IWB1 547 aa6.61□□□□□ -1.35
SDR42E1-201ENST00000328945 R3HCC1Q9Y3T6 440 aaKnown RBP6.61□□□□□ -1.35
SDR42E1-201ENST00000328945 CCDC173Q0VFZ6 552 aa6.61□□□□□ -1.35
SDR42E1-201ENST00000328945 CCDC70Q6NSX1 233 aa6.61□□□□□ -1.35
SDR42E1-201ENST00000328945 CHMP3Q9Y3E7 222 aa6.61□□□□□ -1.35
SDR42E1-201ENST00000328945 FHAD1B1AJZ9 1412 aa6.61□□□□□ -1.35
SDR42E1-201ENST00000328945 PDE4CQ08493 712 aa6.61□□□□□ -1.35
SDR42E1-201ENST00000328945 LTV1Q96GA3 475 aaPredicted RBP6.61□□□□□ -1.35
SDR42E1-201ENST00000328945 CCDC34Q96HJ3 373 aa6.6□□□□□ -1.35
SDR42E1-201ENST00000328945 CHMP5Q9NZZ3 219 aa6.6□□□□□ -1.35
SDR42E1-201ENST00000328945 ACBD3Q9H3P7 528 aa6.6□□□□□ -1.35
SDR42E1-201ENST00000328945 SMARCA2P51531 1590 aa6.6□□□□□ -1.35
SDR42E1-201ENST00000328945 GOLGA4Q13439 2230 aaKnown RBP6.6□□□□□ -1.35
SDR42E1-201ENST00000328945 WRNQ14191 1432 aaPredicted RBP eCLIP6.59□□□□□ -1.35
SDR42E1-201ENST00000328945 APBB1O00213 710 aa6.59□□□□□ -1.35
SDR42E1-201ENST00000328945 TAF7LQ5H9L4 462 aa6.59□□□□□ -1.35
SDR42E1-201ENST00000328945 ZNF592Q92610 1267 aa6.59□□□□□ -1.35
SDR42E1-201ENST00000328945 MORC1Q86VD1 984 aa6.59□□□□□ -1.35
SDR42E1-201ENST00000328945 RAB3GAP2Q9H2M9 1393 aa6.59□□□□□ -1.35
SDR42E1-201ENST00000328945 GTF2E1P29083 439 aaPredicted RBP6.59□□□□□ -1.35
SDR42E1-201ENST00000328945 HSP90B2PQ58FF3 399 aa6.59□□□□□ -1.35
SDR42E1-201ENST00000328945 FOXD4L1Q9NU39 408 aa6.59□□□□□ -1.35
SDR42E1-201ENST00000328945 NUTM2DQ5VT03 806 aaPredicted RBP6.59□□□□□ -1.36
SDR42E1-201ENST00000328945 CENPJQ9HC77 1338 aaPredicted RBP6.59□□□□□ -1.36
SDR42E1-201ENST00000328945 KIF15Q9NS87 1388 aa6.58□□□□□ -1.36
SDR42E1-201ENST00000328945 RDXP35241 583 aaKnown RBP6.58□□□□□ -1.36
SDR42E1-201ENST00000328945 TMF1P82094 1093 aa6.58□□□□□ -1.36
SDR42E1-201ENST00000328945 CCAR2Q8N163 923 aaKnown RBP6.58□□□□□ -1.36
SDR42E1-201ENST00000328945 CGNL1Q0VF96 1302 aa6.58□□□□□ -1.36
SDR42E1-201ENST00000328945 EVA1CP58658 441 aa6.58□□□□□ -1.36
SDR42E1-201ENST00000328945 DCAF8L1A6NGE4 600 aa6.58□□□□□ -1.36
SDR42E1-201ENST00000328945 EIF3AQ14152 1382 aaKnown RBP6.58□□□□□ -1.36
SDR42E1-201ENST00000328945 GOLGA6L19H0YKK7 550 aa6.58□□□□□ -1.36
SDR42E1-201ENST00000328945 HDGFL2Q7Z4V5 671 aaPredicted RBP6.57□□□□□ -1.36
SDR42E1-201ENST00000328945 DCAF11Q8TEB1 546 aa6.57□□□□□ -1.36
SDR42E1-201ENST00000328945 ZMYND15Q9H091 742 aa6.57□□□□□ -1.36
SDR42E1-201ENST00000328945 NUTM2FA1L443 756 aa6.57□□□□□ -1.36
SDR42E1-201ENST00000328945 NLRP13Q86W25 1043 aa6.57□□□□□ -1.36
SDR42E1-201ENST00000328945 IFT57Q9NWB7 429 aa6.57□□□□□ -1.36
SDR42E1-201ENST00000328945 CUX2O14529 1486 aa6.57□□□□□ -1.36
SDR42E1-201ENST00000328945 UQCRHLA0A096LP55 91 aa6.57□□□□□ -1.36
SDR42E1-201ENST00000328945 UQCRHP07919 91 aa6.57□□□□□ -1.36
SDR42E1-201ENST00000328945 RBM10P98175 930 aaKnown RBP6.57□□□□□ -1.36
SDR42E1-201ENST00000328945 AK7Q96M32 723 aa6.57□□□□□ -1.36
SDR42E1-201ENST00000328945 EXOC6Q8TAG9 804 aa6.56□□□□□ -1.36
SDR42E1-201ENST00000328945 CARMIL2Q6F5E8 1435 aa6.56□□□□□ -1.36
SDR42E1-201ENST00000328945 H0YHG0 523 aa6.56□□□□□ -1.36
SDR42E1-201ENST00000328945 ATAD2BQ9ULI0 1458 aa6.56□□□□□ -1.36
SDR42E1-201ENST00000328945 VPS53Q5VIR6 699 aa6.56□□□□□ -1.36
SDR42E1-201ENST00000328945 LEKR1Q6ZMV7 388 aa6.56□□□□□ -1.36
SDR42E1-201ENST00000328945 KIF3AQ9Y496 699 aa6.56□□□□□ -1.36
SDR42E1-201ENST00000328945 GORABQ5T7V8 394 aa6.56□□□□□ -1.36
SDR42E1-201ENST00000328945 MNS1Q8NEH6 495 aa6.56□□□□□ -1.36
SDR42E1-201ENST00000328945 PDCL3Q9H2J4 239 aa6.56□□□□□ -1.36
SDR42E1-201ENST00000328945 WIZO95785 1651 aa6.56□□□□□ -1.36
SDR42E1-201ENST00000328945 NGDNQ8NEJ9 315 aaKnown RBP6.56□□□□□ -1.36
SDR42E1-201ENST00000328945 BECN2A8MW95 431 aa6.56□□□□□ -1.36
SDR42E1-201ENST00000328945 ESPNB1AK53 854 aa6.56□□□□□ -1.36
SDR42E1-201ENST00000328945 MYBBP1AQ9BQG0 1328 aaKnown RBP6.55□□□□□ -1.36
SDR42E1-201ENST00000328945 CYB5RLQ6IPT4 315 aa6.55□□□□□ -1.36
SDR42E1-201ENST00000328945 FRAT2O75474 233 aaPredicted RBP6.55□□□□□ -1.36
SDR42E1-201ENST00000328945 NCAPD3P42695 1498 aa6.55□□□□□ -1.36
SDR42E1-201ENST00000328945 HMMRO75330 724 aa6.55□□□□□ -1.36
SDR42E1-201ENST00000328945 HMGXB3Q12766 1538 aa6.55□□□□□ -1.36
SDR42E1-201ENST00000328945 USP8P40818 1118 aa6.55□□□□□ -1.36
SDR42E1-201ENST00000328945 CCDC191Q8NCU4 936 aa6.55□□□□□ -1.36
SDR42E1-201ENST00000328945 DHX57Q6P158 1386 aaKnown RBP6.55□□□□□ -1.36
SDR42E1-201ENST00000328945 TPM1P09493 284 aa6.55□□□□□ -1.36
SDR42E1-201ENST00000328945 NUCB2P80303 420 aa6.54□□□□□ -1.36
SDR42E1-201ENST00000328945 DEF6Q9H4E7 631 aa6.54□□□□□ -1.36
SDR42E1-201ENST00000328945 HOMER1Q86YM7 354 aa6.54□□□□□ -1.36
SDR42E1-201ENST00000328945 HSP90B1P14625 803 aaKnown RBP6.54□□□□□ -1.36
SDR42E1-201ENST00000328945 PATL2C9JE40 543 aaKnown RBP6.54□□□□□ -1.36
SDR42E1-201ENST00000328945 FMN1Q68DA7 1419 aa6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms