RNA–Protein interactions for RNA: ENST00000322310.9

SSNA1-201, Transcript of SS nuclear autoantigen 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSNA1, Length 896 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSNA1-201ENST00000322310 TNRQ92752 1358 aa31.74■■■□□ 2.67
SSNA1-201ENST00000322310 HSPA1LP34931 641 aa31.74■■■□□ 2.67
SSNA1-201ENST00000322310 PIP4K2BP78356 416 aa31.74■■■□□ 2.67
SSNA1-201ENST00000322310 POLR1AO95602 1720 aaPredicted RBP31.72■■■□□ 2.67
SSNA1-201ENST00000322310 EHBP1L1Q8N3D4 1523 aa31.72■■■□□ 2.67
SSNA1-201ENST00000322310 KIF3BO15066 747 aa31.71■■■□□ 2.67
SSNA1-201ENST00000322310 SHANK2Q9UPX8 1470 aa31.69■■■□□ 2.66
SSNA1-201ENST00000322310 CPS1P31327 1500 aa31.69■■■□□ 2.66
SSNA1-201ENST00000322310 PZPP20742 1482 aa31.68■■■□□ 2.66
SSNA1-201ENST00000322310 KDM5DQ9BY66 1539 aa31.68■■■□□ 2.66
SSNA1-201ENST00000322310 MED1Q15648 1581 aaPredicted RBP31.68■■■□□ 2.66
SSNA1-201ENST00000322310 CEP162Q5TB80 1403 aa31.66■■■□□ 2.66
SSNA1-201ENST00000322310 TOM1O60784 492 aa31.65■■■□□ 2.66
SSNA1-201ENST00000322310 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP31.65■■■□□ 2.66
SSNA1-201ENST00000322310 CCDC141Q6ZP82 1450 aa31.63■■■□□ 2.65
SSNA1-201ENST00000322310 WASHC2CQ9Y4E1 1318 aa31.62■■■□□ 2.65
SSNA1-201ENST00000322310 ANKLE2Q86XL3 938 aa31.6■■■□□ 2.65
SSNA1-201ENST00000322310 VWDEQ8N2E2 1590 aa31.6■■■□□ 2.65
SSNA1-201ENST00000322310 FAM135AQ9P2D6 1515 aa31.59■■■□□ 2.65
SSNA1-201ENST00000322310 CAMSAP2Q08AD1 1489 aa31.59■■■□□ 2.65
SSNA1-201ENST00000322310 MIA2Q96PC5 1412 aa31.58■■■□□ 2.65
SSNA1-201ENST00000322310 THEMISQ8N1K5 641 aaPredicted RBP31.56■■■□□ 2.64
SSNA1-201ENST00000322310 UGGT1Q9NYU2 1555 aa31.56■■■□□ 2.64
SSNA1-201ENST00000322310 NCOA2Q15596 1464 aa31.55■■■□□ 2.64
SSNA1-201ENST00000322310 NPHP4O75161 1426 aaPredicted RBP31.55■■■□□ 2.64
SSNA1-201ENST00000322310 NLRP1Q9C000 1473 aa31.54■■■□□ 2.64
SSNA1-201ENST00000322310 ALKQ9UM73 1620 aa31.53■■■□□ 2.64
SSNA1-201ENST00000322310 MED14O60244 1454 aa31.52■■■□□ 2.64
SSNA1-201ENST00000322310 DEPDC5O75140 1603 aa31.51■■■□□ 2.63
SSNA1-201ENST00000322310 RSPH4AQ5TD94 716 aa31.49■■■□□ 2.63
SSNA1-201ENST00000322310 IQGAP1P46940 1657 aa31.46■■■□□ 2.63
SSNA1-201ENST00000322310 ARHGEF5Q12774 1597 aa31.45■■■□□ 2.63
SSNA1-201ENST00000322310 SENP3Q9H4L4 574 aaPredicted RBP31.44■■■□□ 2.62
SSNA1-201ENST00000322310 PHF23Q9BUL5 403 aaPredicted RBP31.43■■■□□ 2.62
SSNA1-201ENST00000322310 TSPY4P0CV99 314 aa31.42■■■□□ 2.62
SSNA1-201ENST00000322310 TSPY10P0CW01 314 aa31.42■■■□□ 2.62
SSNA1-201ENST00000322310 STRCP1A6NGW2 1772 aa31.42■■■□□ 2.62
SSNA1-201ENST00000322310 ABCC3O15438 1527 aa31.41■■■□□ 2.62
SSNA1-201ENST00000322310 LRRC7Q96NW7 1537 aa31.4■■■□□ 2.62
SSNA1-201ENST00000322310 RNF17Q9BXT8 1623 aaKnown RBP31.4■■■□□ 2.62
SSNA1-201ENST00000322310 ERVK-7P63135 1459 aa31.36■■■□□ 2.61
SSNA1-201ENST00000322310 ZC3H13Q5T200 1668 aaKnown RBP31.35■■■□□ 2.61
SSNA1-201ENST00000322310 SYNMO15061 1565 aa31.33■■■□□ 2.61
SSNA1-201ENST00000322310 MROH1Q8NDA8 1641 aa31.31■■■□□ 2.6
SSNA1-201ENST00000322310 MAST1Q9Y2H9 1570 aa31.3■■■□□ 2.6
SSNA1-201ENST00000322310 EIF2AK4Q9P2K8 1649 aaKnown RBP31.28■■■□□ 2.6
SSNA1-201ENST00000322310 UBR1Q8IWV7 1749 aa31.27■■■□□ 2.6
SSNA1-201ENST00000322310 CEP152O94986 1710 aa31.27■■■□□ 2.6
SSNA1-201ENST00000322310 LRRC9Q6ZRR7 1453 aa31.25■■■□□ 2.59
SSNA1-201ENST00000322310 SCAF11Q99590 1463 aaKnown RBP31.25■■■□□ 2.59
SSNA1-201ENST00000322310 LTKP29376 864 aa31.22■■■□□ 2.59
SSNA1-201ENST00000322310 CFAP65Q6ZU64 1925 aaKnown RBP31.21■■■□□ 2.59
SSNA1-201ENST00000322310 ARHGAP23Q9P227 1491 aa31.19■■■□□ 2.58
SSNA1-201ENST00000322310 TXNDC2Q86VQ3 553 aa31.18■■■□□ 2.58
SSNA1-201ENST00000322310 SLIT1O75093 1534 aa31.17■■■□□ 2.58
SSNA1-201ENST00000322310 DUOX2Q9NRD8 1548 aa31.15■■■□□ 2.58
SSNA1-201ENST00000322310 RGS17Q9UGC6 210 aaPredicted RBP31.15■■■□□ 2.58
SSNA1-201ENST00000322310 KANK4Q5T7N3 995 aaPredicted RBP31.14■■■□□ 2.58
SSNA1-201ENST00000322310 XIRP1Q702N8 1843 aaKnown RBP31.14■■■□□ 2.58
SSNA1-201ENST00000322310 VPS8Q8N3P4 1428 aa31.13■■■□□ 2.57
SSNA1-201ENST00000322310 MYOM3Q5VTT5 1437 aa31.12■■■□□ 2.57
SSNA1-201ENST00000322310 PRDM15P57071 1507 aaPredicted RBP31.1■■■□□ 2.57
SSNA1-201ENST00000322310 ARHGAP31Q2M1Z3 1444 aa31.1■■■□□ 2.57
SSNA1-201ENST00000322310 EID1Q9Y6B2 187 aa31.09■■■□□ 2.57
SSNA1-201ENST00000322310 KIF15Q9NS87 1388 aa31.08■■■□□ 2.57
SSNA1-201ENST00000322310 PIK3C2BO00750 1634 aa31.07■■■□□ 2.56
SSNA1-201ENST00000322310 GRWD1Q9BQ67 446 aaKnown RBP eCLIP31.05■■■□□ 2.56
SSNA1-201ENST00000322310 TMEM2Q9UHN6 1383 aa31.05■■■□□ 2.56
SSNA1-201ENST00000322310 RRP7BPQ9NSQ0 103 aa31.04■■■□□ 2.56
SSNA1-201ENST00000322310 ERBINQ96RT1 1412 aa31.03■■■□□ 2.56
SSNA1-201ENST00000322310 FAM135BQ49AJ0 1406 aa31.02■■■□□ 2.56
SSNA1-201ENST00000322310 TMEM94Q12767 1356 aa31.01■■■□□ 2.55
SSNA1-201ENST00000322310 ABCC5O15440 1437 aa31■■■□□ 2.55
SSNA1-201ENST00000322310 MAP3K1Q13233 1512 aa31■■■□□ 2.55
SSNA1-201ENST00000322310 STAG3Q9UJ98 1225 aa31■■■□□ 2.55
SSNA1-201ENST00000322310 CROCC2H7BZ55 1655 aa30.99■■■□□ 2.55
SSNA1-201ENST00000322310 RBM33Q96EV2 1170 aaKnown RBP30.97■■■□□ 2.55
SSNA1-201ENST00000322310 EFCAB6Q5THR3 1501 aa30.96■■■□□ 2.55
SSNA1-201ENST00000322310 POTEAQ6S8J7 498 aa30.95■■■□□ 2.55
SSNA1-201ENST00000322310 LOC105371045A0A1W2PR82 267 aa30.94■■■□□ 2.54
SSNA1-201ENST00000322310 IDI1Q13907 227 aa30.94■■■□□ 2.54
SSNA1-201ENST00000322310 SLC26A8Q96RN1 970 aa30.94■■■□□ 2.54
SSNA1-201ENST00000322310 KANK1Q14678 1352 aa30.93■■■□□ 2.54
SSNA1-201ENST00000322310 KCNA6P17658 529 aa30.93■■■□□ 2.54
SSNA1-201ENST00000322310 ROBO1Q9Y6N7 1651 aa30.93■■■□□ 2.54
SSNA1-201ENST00000322310 PROSER2Q86WR7 435 aaPredicted RBP30.91■■■□□ 2.54
SSNA1-201ENST00000322310 PTPN23Q9H3S7 1636 aa30.91■■■□□ 2.54
SSNA1-201ENST00000322310 TET3O43151 1660 aa30.9■■■□□ 2.54
SSNA1-201ENST00000322310 KDM5AP29375 1690 aaKnown RBP30.9■■■□□ 2.54
SSNA1-201ENST00000322310 DAPK1P53355 1430 aa30.9■■■□□ 2.54
SSNA1-201ENST00000322310 LMTK2Q8IWU2 1503 aa30.88■■■□□ 2.53
SSNA1-201ENST00000322310 CHIC2Q9UKJ5 165 aa30.84■■■□□ 2.53
SSNA1-201ENST00000322310 ADGRB3O60242 1522 aa30.83■■■□□ 2.53
SSNA1-201ENST00000322310 NKTRP30414 1462 aaKnown RBP30.82■■■□□ 2.53
SSNA1-201ENST00000322310 NOS1P29475 1434 aa30.82■■■□□ 2.52
SSNA1-201ENST00000322310 NWD1Q149M9 1564 aa30.82■■■□□ 2.52
SSNA1-201ENST00000322310 ANKRD30AQ9BXX3 1397 aa30.79■■■□□ 2.52
SSNA1-201ENST00000322310 BCANQ96GW7 911 aa30.79■■■□□ 2.52
SSNA1-201ENST00000322310 FGD6Q6ZV73 1430 aa30.79■■■□□ 2.52
SSNA1-201ENST00000322310 MSH6P52701 1360 aa30.78■■■□□ 2.52
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms