RNA–Protein interactions for RNA: ENST00000320161.10

SGIP1-202, Transcript of SH3 domain GRB2 like endophilin interacting protein 1, humanhuman

TSL 3

Gene SGIP1, Length 680 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGIP1-202ENST00000320161 A2ML1A8K2U0 1454 aa13.33□□□□□ -0.28
SGIP1-202ENST00000320161 CCDC141Q6ZP82 1450 aa13.33□□□□□ -0.28
SGIP1-202ENST00000320161 ZNF644Q9H582 1327 aaPredicted RBP13.33□□□□□ -0.28
SGIP1-202ENST00000320161 FAM135AQ9P2D6 1515 aa13.33□□□□□ -0.28
SGIP1-202ENST00000320161 KIF3BO15066 747 aa13.32□□□□□ -0.28
SGIP1-202ENST00000320161 DHX29Q7Z478 1369 aaKnown RBP13.32□□□□□ -0.28
SGIP1-202ENST00000320161 CAMSAP2Q08AD1 1489 aa13.31□□□□□ -0.28
SGIP1-202ENST00000320161 KDM5DQ9BY66 1539 aa13.31□□□□□ -0.28
SGIP1-202ENST00000320161 TSPY4P0CV99 314 aa13.31□□□□□ -0.28
SGIP1-202ENST00000320161 TSPY10P0CW01 314 aa13.31□□□□□ -0.28
SGIP1-202ENST00000320161 ZNF335Q9H4Z2 1342 aaPredicted RBP13.31□□□□□ -0.28
SGIP1-202ENST00000320161 WASHC2CQ9Y4E1 1318 aa13.31□□□□□ -0.28
SGIP1-202ENST00000320161 DNMT1P26358 1616 aaKnown RBP13.31□□□□□ -0.28
SGIP1-202ENST00000320161 TCOF1Q13428 1488 aaKnown RBP13.3□□□□□ -0.28
SGIP1-202ENST00000320161 MBD5Q9P267 1494 aa13.3□□□□□ -0.28
SGIP1-202ENST00000320161 TNRQ92752 1358 aa13.3□□□□□ -0.28
SGIP1-202ENST00000320161 NCOA2Q15596 1464 aa13.29□□□□□ -0.28
SGIP1-202ENST00000320161 SOCS7O14512 581 aa13.29□□□□□ -0.28
SGIP1-202ENST00000320161 SCAF1Q9H7N4 1312 aaKnown RBP13.28□□□□□ -0.28
SGIP1-202ENST00000320161 ARHGEF5Q12774 1597 aa13.28□□□□□ -0.28
SGIP1-202ENST00000320161 PZPP20742 1482 aa13.27□□□□□ -0.29
SGIP1-202ENST00000320161 CFAP65Q6ZU64 1925 aaKnown RBP13.27□□□□□ -0.29
SGIP1-202ENST00000320161 CPS1P31327 1500 aa13.26□□□□□ -0.29
SGIP1-202ENST00000320161 ZC3H13Q5T200 1668 aaKnown RBP13.26□□□□□ -0.29
SGIP1-202ENST00000320161 ILDR2Q71H61 639 aa13.26□□□□□ -0.29
SGIP1-202ENST00000320161 ANKLE2Q86XL3 938 aa13.26□□□□□ -0.29
SGIP1-202ENST00000320161 THEMISQ8N1K5 641 aaPredicted RBP13.26□□□□□ -0.29
SGIP1-202ENST00000320161 NLRP1Q9C000 1473 aa13.24□□□□□ -0.29
SGIP1-202ENST00000320161 TOM1O60784 492 aa13.24□□□□□ -0.29
SGIP1-202ENST00000320161 UGGT1Q9NYU2 1555 aa13.24□□□□□ -0.29
SGIP1-202ENST00000320161 FBXO31Q5XUX0 539 aaPredicted RBP13.23□□□□□ -0.29
SGIP1-202ENST00000320161 EIF2AK4Q9P2K8 1649 aaKnown RBP13.22□□□□□ -0.29
SGIP1-202ENST00000320161 SHANK2Q9UPX8 1470 aa13.22□□□□□ -0.29
SGIP1-202ENST00000320161 IQGAP1P46940 1657 aa13.21□□□□□ -0.29
SGIP1-202ENST00000320161 DEPDC5O75140 1603 aa13.21□□□□□ -0.29
SGIP1-202ENST00000320161 RNF17Q9BXT8 1623 aaKnown RBP13.21□□□□□ -0.29
SGIP1-202ENST00000320161 PIP4K2BP78356 416 aa13.21□□□□□ -0.29
SGIP1-202ENST00000320161 MIA2Q96PC5 1412 aa13.21□□□□□ -0.3
SGIP1-202ENST00000320161 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.2□□□□□ -0.3
SGIP1-202ENST00000320161 NEURL4Q96JN8 1562 aa13.2□□□□□ -0.3
SGIP1-202ENST00000320161 MAST1Q9Y2H9 1570 aa13.2□□□□□ -0.3
SGIP1-202ENST00000320161 LRRC9Q6ZRR7 1453 aa13.2□□□□□ -0.3
SGIP1-202ENST00000320161 VPS8Q8N3P4 1428 aa13.2□□□□□ -0.3
SGIP1-202ENST00000320161 CEP152O94986 1710 aa13.19□□□□□ -0.3
SGIP1-202ENST00000320161 APLP2Q06481 763 aa13.19□□□□□ -0.3
SGIP1-202ENST00000320161 NPHP4O75161 1426 aaPredicted RBP13.18□□□□□ -0.3
SGIP1-202ENST00000320161 ABCC3O15438 1527 aa13.17□□□□□ -0.3
SGIP1-202ENST00000320161 MAP3K1Q13233 1512 aa13.16□□□□□ -0.3
SGIP1-202ENST00000320161 MED14O60244 1454 aa13.16□□□□□ -0.3
SGIP1-202ENST00000320161 MYOM3Q5VTT5 1437 aa13.15□□□□□ -0.3
SGIP1-202ENST00000320161 DUOX2Q9NRD8 1548 aa13.15□□□□□ -0.3
SGIP1-202ENST00000320161 SYNMO15061 1565 aa13.15□□□□□ -0.3
SGIP1-202ENST00000320161 VWDEQ8N2E2 1590 aa13.15□□□□□ -0.3
SGIP1-202ENST00000320161 HSPA1LP34931 641 aa13.14□□□□□ -0.31
SGIP1-202ENST00000320161 CROCC2H7BZ55 1655 aa13.14□□□□□ -0.31
SGIP1-202ENST00000320161 UBR1Q8IWV7 1749 aa13.13□□□□□ -0.31
SGIP1-202ENST00000320161 ERVK-7P63135 1459 aa13.13□□□□□ -0.31
SGIP1-202ENST00000320161 MED1Q15648 1581 aaPredicted RBP13.12□□□□□ -0.31
SGIP1-202ENST00000320161 KANK1Q14678 1352 aa13.12□□□□□ -0.31
SGIP1-202ENST00000320161 MAPK8IP2Q13387 824 aaPredicted RBP13.11□□□□□ -0.31
SGIP1-202ENST00000320161 STAG3Q9UJ98 1225 aa13.11□□□□□ -0.31
SGIP1-202ENST00000320161 EID1Q9Y6B2 187 aa13.11□□□□□ -0.31
SGIP1-202ENST00000320161 SCAF11Q99590 1463 aaKnown RBP13.1□□□□□ -0.31
SGIP1-202ENST00000320161 MROH1Q8NDA8 1641 aa13.1□□□□□ -0.31
SGIP1-202ENST00000320161 PTPN23Q9H3S7 1636 aa13.1□□□□□ -0.31
SGIP1-202ENST00000320161 KIF15Q9NS87 1388 aa13.09□□□□□ -0.31
SGIP1-202ENST00000320161 ERBINQ96RT1 1412 aa13.09□□□□□ -0.31
SGIP1-202ENST00000320161 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.09□□□□□ -0.31
SGIP1-202ENST00000320161 STRCP1A6NGW2 1772 aa13.09□□□□□ -0.31
SGIP1-202ENST00000320161 PRDM15P57071 1507 aaPredicted RBP13.08□□□□□ -0.31
SGIP1-202ENST00000320161 LOC105371045A0A1W2PR82 267 aa13.08□□□□□ -0.32
SGIP1-202ENST00000320161 KANK4Q5T7N3 995 aaPredicted RBP13.08□□□□□ -0.32
SGIP1-202ENST00000320161 TXNDC2Q86VQ3 553 aa13.07□□□□□ -0.32
SGIP1-202ENST00000320161 RRP7BPQ9NSQ0 103 aa13.07□□□□□ -0.32
SGIP1-202ENST00000320161 LRRC7Q96NW7 1537 aa13.06□□□□□ -0.32
SGIP1-202ENST00000320161 KDM5AP29375 1690 aaKnown RBP13.05□□□□□ -0.32
SGIP1-202ENST00000320161 ARHGAP31Q2M1Z3 1444 aa13.05□□□□□ -0.32
SGIP1-202ENST00000320161 PIK3C2BO00750 1634 aa13.05□□□□□ -0.32
SGIP1-202ENST00000320161 SLIT1O75093 1534 aa13.04□□□□□ -0.32
SGIP1-202ENST00000320161 ANKRD30AQ9BXX3 1397 aa13.04□□□□□ -0.32
SGIP1-202ENST00000320161 DAPK1P53355 1430 aa13.04□□□□□ -0.32
SGIP1-202ENST00000320161 BCANQ96GW7 911 aa13.02□□□□□ -0.33
SGIP1-202ENST00000320161 ABCC5O15440 1437 aa13.02□□□□□ -0.33
SGIP1-202ENST00000320161 ARHGAP23Q9P227 1491 aa13.02□□□□□ -0.33
SGIP1-202ENST00000320161 EFCAB6Q5THR3 1501 aa13.02□□□□□ -0.33
SGIP1-202ENST00000320161 XIRP1Q702N8 1843 aaKnown RBP13.02□□□□□ -0.33
SGIP1-202ENST00000320161 FGD6Q6ZV73 1430 aa13.01□□□□□ -0.33
SGIP1-202ENST00000320161 ALKQ9UM73 1620 aa13□□□□□ -0.33
SGIP1-202ENST00000320161 CHIC2Q9UKJ5 165 aa13□□□□□ -0.33
SGIP1-202ENST00000320161 TMEM2Q9UHN6 1383 aa12.99□□□□□ -0.33
SGIP1-202ENST00000320161 LTKP29376 864 aa12.99□□□□□ -0.33
SGIP1-202ENST00000320161 LMTK2Q8IWU2 1503 aa12.98□□□□□ -0.33
SGIP1-202ENST00000320161 HDGFP51858 240 aaKnown RBP12.97□□□□□ -0.33
SGIP1-202ENST00000320161 FAM50AQ14320 339 aaKnown RBP12.96□□□□□ -0.33
SGIP1-202ENST00000320161 PROSER2Q86WR7 435 aaPredicted RBP12.96□□□□□ -0.33
SGIP1-202ENST00000320161 SLC52A1Q9NWF4 448 aa12.96□□□□□ -0.33
SGIP1-202ENST00000320161 ADGRB3O60242 1522 aa12.96□□□□□ -0.33
SGIP1-202ENST00000320161 MYO5BQ9ULV0 1848 aa12.95□□□□□ -0.34
SGIP1-202ENST00000320161 PPP1R15AO75807 674 aaPredicted RBP12.95□□□□□ -0.34
SGIP1-202ENST00000320161 IDI1Q13907 227 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms