RNA–Protein interactions for RNA: ENST00000318561.7

SFTPC-201, Transcript of surfactant protein C, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SFTPC, Length 997 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFTPC-201ENST00000318561 SYCP2Q9BX26 1530 aa26.29■■□□□ 1.8
SFTPC-201ENST00000318561 MYOM3Q5VTT5 1437 aa26.29■■□□□ 1.8
SFTPC-201ENST00000318561 KIAA1107Q9UPP5 1409 aa26.29■■□□□ 1.8
SFTPC-201ENST00000318561 CLTCQ00610 1675 aaKnown RBP26.28■■□□□ 1.8
SFTPC-201ENST00000318561 A2ML1A8K2U0 1454 aa26.25■■□□□ 1.79
SFTPC-201ENST00000318561 ZNF644Q9H582 1327 aaPredicted RBP26.25■■□□□ 1.79
SFTPC-201ENST00000318561 CAMSAP2Q08AD1 1489 aa26.24■■□□□ 1.79
SFTPC-201ENST00000318561 MIA2Q96PC5 1412 aa26.24■■□□□ 1.79
SFTPC-201ENST00000318561 HNRNPMP52272 730 aaKnown RBP eCLIP26.24■■□□□ 1.79
SFTPC-201ENST00000318561 GGT6Q6P531 493 aa26.24■■□□□ 1.79
SFTPC-201ENST00000318561 DNMT1P26358 1616 aaKnown RBP26.22■■□□□ 1.79
SFTPC-201ENST00000318561 NEURL4Q96JN8 1562 aa26.22■■□□□ 1.79
SFTPC-201ENST00000318561 SPAG9O60271 1321 aaKnown RBP26.21■■□□□ 1.79
SFTPC-201ENST00000318561 VWDEQ8N2E2 1590 aa26.18■■□□□ 1.78
SFTPC-201ENST00000318561 MBD5Q9P267 1494 aa26.17■■□□□ 1.78
SFTPC-201ENST00000318561 FGD6Q6ZV73 1430 aa26.15■■□□□ 1.78
SFTPC-201ENST00000318561 PTPN23Q9H3S7 1636 aa26.15■■□□□ 1.78
SFTPC-201ENST00000318561 A2MP01023 1474 aa26.15■■□□□ 1.78
SFTPC-201ENST00000318561 PPARGC1BQ86YN6 1023 aaKnown RBP26.14■■□□□ 1.78
SFTPC-201ENST00000318561 PLXNC1O60486 1568 aa26.14■■□□□ 1.78
SFTPC-201ENST00000318561 ARHGEF5Q12774 1597 aa26.13■■□□□ 1.77
SFTPC-201ENST00000318561 CCDC141Q6ZP82 1450 aa26.13■■□□□ 1.77
SFTPC-201ENST00000318561 RSPH4AQ5TD94 716 aa26.12■■□□□ 1.77
SFTPC-201ENST00000318561 POTEAQ6S8J7 498 aa26.12■■□□□ 1.77
SFTPC-201ENST00000318561 ANKLE2Q86XL3 938 aa26.12■■□□□ 1.77
SFTPC-201ENST00000318561 POLR1AO95602 1720 aaPredicted RBP26.11■■□□□ 1.77
SFTPC-201ENST00000318561 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP26.1■■□□□ 1.77
SFTPC-201ENST00000318561 ATP7AQ04656 1500 aa26.1■■□□□ 1.77
SFTPC-201ENST00000318561 FBXO31Q5XUX0 539 aaPredicted RBP26.1■■□□□ 1.77
SFTPC-201ENST00000318561 INO80Q9ULG1 1556 aaPredicted RBP26.1■■□□□ 1.77
SFTPC-201ENST00000318561 TNRQ92752 1358 aa26.08■■□□□ 1.77
SFTPC-201ENST00000318561 NPHP4O75161 1426 aaPredicted RBP26.06■■□□□ 1.76
SFTPC-201ENST00000318561 LRRC7Q96NW7 1537 aa26.06■■□□□ 1.76
SFTPC-201ENST00000318561 RTEL1-TNFRSF6BF6WH68 1400 aa26.04■■□□□ 1.76
SFTPC-201ENST00000318561 TSPY4P0CV99 314 aa26.02■■□□□ 1.76
SFTPC-201ENST00000318561 TSPY10P0CW01 314 aa26.02■■□□□ 1.76
SFTPC-201ENST00000318561 MED14O60244 1454 aa26.02■■□□□ 1.76
SFTPC-201ENST00000318561 THEMISQ8N1K5 641 aaPredicted RBP26.01■■□□□ 1.75
SFTPC-201ENST00000318561 MAST1Q9Y2H9 1570 aa25.99■■□□□ 1.75
SFTPC-201ENST00000318561 CROCC2H7BZ55 1655 aa25.99■■□□□ 1.75
SFTPC-201ENST00000318561 ADGBQ8N7X0 1667 aa25.99■■□□□ 1.75
SFTPC-201ENST00000318561 RNF17Q9BXT8 1623 aaKnown RBP25.99■■□□□ 1.75
SFTPC-201ENST00000318561 FAM50AQ14320 339 aaKnown RBP25.98■■□□□ 1.75
SFTPC-201ENST00000318561 ABCC5O15440 1437 aa25.97■■□□□ 1.75
SFTPC-201ENST00000318561 DAPK1P53355 1430 aa25.96■■□□□ 1.75
SFTPC-201ENST00000318561 STRCP1A6NGW2 1772 aa25.95■■□□□ 1.75
SFTPC-201ENST00000318561 PZPP20742 1482 aa25.94■■□□□ 1.74
SFTPC-201ENST00000318561 DEPDC5O75140 1603 aa25.94■■□□□ 1.74
SFTPC-201ENST00000318561 UGGT1Q9NYU2 1555 aa25.92■■□□□ 1.74
SFTPC-201ENST00000318561 FAM135AQ9P2D6 1515 aa25.92■■□□□ 1.74
SFTPC-201ENST00000318561 SYNMO15061 1565 aa25.9■■□□□ 1.74
SFTPC-201ENST00000318561 IQGAP1P46940 1657 aa25.9■■□□□ 1.74
SFTPC-201ENST00000318561 NLRP1Q9C000 1473 aa25.89■■□□□ 1.73
SFTPC-201ENST00000318561 SETD1AO15047 1707 aaKnown RBP25.88■■□□□ 1.73
SFTPC-201ENST00000318561 RRBP1Q9P2E9 1410 aaKnown RBP25.87■■□□□ 1.73
SFTPC-201ENST00000318561 DHX29Q7Z478 1369 aaKnown RBP25.86■■□□□ 1.73
SFTPC-201ENST00000318561 KIF3BO15066 747 aa25.86■■□□□ 1.73
SFTPC-201ENST00000318561 WASHC2CQ9Y4E1 1318 aa25.84■■□□□ 1.73
SFTPC-201ENST00000318561 KDM5DQ9BY66 1539 aa25.83■■□□□ 1.73
SFTPC-201ENST00000318561 FAM135BQ49AJ0 1406 aa25.82■■□□□ 1.72
SFTPC-201ENST00000318561 CHIC2Q9UKJ5 165 aa25.82■■□□□ 1.72
SFTPC-201ENST00000318561 ANKRD30AQ9BXX3 1397 aa25.81■■□□□ 1.72
SFTPC-201ENST00000318561 UPF1Q92900 1129 aaKnown RBP eCLIP25.8■■□□□ 1.72
SFTPC-201ENST00000318561 KIF15Q9NS87 1388 aa25.8■■□□□ 1.72
SFTPC-201ENST00000318561 DUOX2Q9NRD8 1548 aa25.79■■□□□ 1.72
SFTPC-201ENST00000318561 ADGRL2O95490 1459 aa25.79■■□□□ 1.72
SFTPC-201ENST00000318561 RRP7BPQ9NSQ0 103 aa25.77■■□□□ 1.72
SFTPC-201ENST00000318561 EIF2AK4Q9P2K8 1649 aaKnown RBP25.75■■□□□ 1.71
SFTPC-201ENST00000318561 ITGAEP38570 1179 aa25.74■■□□□ 1.71
SFTPC-201ENST00000318561 ZC3H13Q5T200 1668 aaKnown RBP25.73■■□□□ 1.71
SFTPC-201ENST00000318561 ERBINQ96RT1 1412 aa25.71■■□□□ 1.71
SFTPC-201ENST00000318561 ROCK1Q13464 1354 aa25.69■■□□□ 1.7
SFTPC-201ENST00000318561 SCAF11Q99590 1463 aaKnown RBP25.68■■□□□ 1.7
SFTPC-201ENST00000318561 LTKP29376 864 aa25.68■■□□□ 1.7
SFTPC-201ENST00000318561 XIRP1Q702N8 1843 aaKnown RBP25.67■■□□□ 1.7
SFTPC-201ENST00000318561 TRIM52Q96A61 297 aa25.65■■□□□ 1.7
SFTPC-201ENST00000318561 TMEM94Q12767 1356 aa25.65■■□□□ 1.7
SFTPC-201ENST00000318561 TXNDC2Q86VQ3 553 aa25.64■■□□□ 1.7
SFTPC-201ENST00000318561 ROBO1Q9Y6N7 1651 aa25.64■■□□□ 1.69
SFTPC-201ENST00000318561 ANKRD50Q9ULJ7 1429 aa25.62■■□□□ 1.69
SFTPC-201ENST00000318561 MROH1Q8NDA8 1641 aa25.61■■□□□ 1.69
SFTPC-201ENST00000318561 ERVK-7P63135 1459 aa25.6■■□□□ 1.69
SFTPC-201ENST00000318561 RBM33Q96EV2 1170 aaKnown RBP25.6■■□□□ 1.69
SFTPC-201ENST00000318561 JCADQ9P266 1359 aa25.59■■□□□ 1.69
SFTPC-201ENST00000318561 SRCAPQ6ZRS2 3230 aa25.58■■□□□ 1.69
SFTPC-201ENST00000318561 ARHGAP23Q9P227 1491 aa25.58■■□□□ 1.69
SFTPC-201ENST00000318561 PRDM15P57071 1507 aaPredicted RBP25.58■■□□□ 1.68
SFTPC-201ENST00000318561 ABCC3O15438 1527 aa25.56■■□□□ 1.68
SFTPC-201ENST00000318561 CEP152O94986 1710 aa25.54■■□□□ 1.68
SFTPC-201ENST00000318561 UBR1Q8IWV7 1749 aa25.54■■□□□ 1.68
SFTPC-201ENST00000318561 PROSER2Q86WR7 435 aaPredicted RBP25.54■■□□□ 1.68
SFTPC-201ENST00000318561 SLIT1O75093 1534 aa25.53■■□□□ 1.68
SFTPC-201ENST00000318561 EID1Q9Y6B2 187 aa25.53■■□□□ 1.68
SFTPC-201ENST00000318561 GCC2Q8IWJ2 1684 aa25.52■■□□□ 1.68
SFTPC-201ENST00000318561 ZNF772Q68DY9 489 aaPredicted RBP25.52■■□□□ 1.68
SFTPC-201ENST00000318561 GRWD1Q9BQ67 446 aaKnown RBP eCLIP25.52■■□□□ 1.68
SFTPC-201ENST00000318561 KANK1Q14678 1352 aa25.52■■□□□ 1.68
SFTPC-201ENST00000318561 LRP6O75581 1613 aa25.52■■□□□ 1.68
SFTPC-201ENST00000318561 KCNA6P17658 529 aa25.5■■□□□ 1.67
SFTPC-201ENST00000318561 MEX3CQ5U5Q3 659 aaKnown RBP25.5■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 103.5 ms