RNA–Protein interactions for RNA: ENST00000318438.6

SYCN-201, Transcript of syncollin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SYCN, Length 573 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYCN-201ENST00000318438 GPATCH8Q9UKJ3 1502 aaKnown RBP21.79■■□□□ 1.08
SYCN-201ENST00000318438 NPHP4O75161 1426 aaPredicted RBP21.79■■□□□ 1.08
SYCN-201ENST00000318438 LRRC7Q96NW7 1537 aa21.76■■□□□ 1.07
SYCN-201ENST00000318438 KIAA1107Q9UPP5 1409 aa21.76■■□□□ 1.07
SYCN-201ENST00000318438 CASKIN1Q8WXD9 1431 aa21.75■■□□□ 1.07
SYCN-201ENST00000318438 POTEAQ6S8J7 498 aa21.75■■□□□ 1.07
SYCN-201ENST00000318438 MED14O60244 1454 aa21.75■■□□□ 1.07
SYCN-201ENST00000318438 RNF17Q9BXT8 1623 aaKnown RBP21.74■■□□□ 1.07
SYCN-201ENST00000318438 THEMISQ8N1K5 641 aaPredicted RBP21.74■■□□□ 1.07
SYCN-201ENST00000318438 STRCP1A6NGW2 1772 aa21.73■■□□□ 1.07
SYCN-201ENST00000318438 PLEKHH2Q8IVE3 1493 aa21.72■■□□□ 1.07
SYCN-201ENST00000318438 CFDP1Q9UEE9 299 aaPredicted RBP21.72■■□□□ 1.07
SYCN-201ENST00000318438 PZPP20742 1482 aa21.71■■□□□ 1.07
SYCN-201ENST00000318438 DEPDC5O75140 1603 aa21.71■■□□□ 1.07
SYCN-201ENST00000318438 ADGBQ8N7X0 1667 aa21.71■■□□□ 1.07
SYCN-201ENST00000318438 UGGT1Q9NYU2 1555 aa21.7■■□□□ 1.06
SYCN-201ENST00000318438 IQGAP1P46940 1657 aa21.69■■□□□ 1.06
SYCN-201ENST00000318438 FAM135AQ9P2D6 1515 aa21.68■■□□□ 1.06
SYCN-201ENST00000318438 SYNMO15061 1565 aa21.68■■□□□ 1.06
SYCN-201ENST00000318438 NLRP1Q9C000 1473 aa21.67■■□□□ 1.06
SYCN-201ENST00000318438 MIA2Q96PC5 1412 aa21.67■■□□□ 1.06
SYCN-201ENST00000318438 KDM5DQ9BY66 1539 aa21.66■■□□□ 1.06
SYCN-201ENST00000318438 CHIC1Q5VXU3 224 aa21.66■■□□□ 1.06
SYCN-201ENST00000318438 DHX29Q7Z478 1369 aaKnown RBP21.65■■□□□ 1.06
SYCN-201ENST00000318438 ZNF644Q9H582 1327 aaPredicted RBP21.65■■□□□ 1.06
SYCN-201ENST00000318438 KIF3BO15066 747 aa21.65■■□□□ 1.06
SYCN-201ENST00000318438 CCNB3Q8WWL7 1395 aa21.64■■□□□ 1.06
SYCN-201ENST00000318438 WASHC2CQ9Y4E1 1318 aa21.63■■□□□ 1.05
SYCN-201ENST00000318438 SETD1AO15047 1707 aaKnown RBP21.61■■□□□ 1.05
SYCN-201ENST00000318438 FYCO1Q9BQS8 1478 aa21.6■■□□□ 1.05
SYCN-201ENST00000318438 MBD5Q9P267 1494 aa21.59■■□□□ 1.05
SYCN-201ENST00000318438 RTEL1-TNFRSF6BF6WH68 1400 aa21.59■■□□□ 1.05
SYCN-201ENST00000318438 ZC3H13Q5T200 1668 aaKnown RBP21.55■■□□□ 1.04
SYCN-201ENST00000318438 FAM135BQ49AJ0 1406 aa21.55■■□□□ 1.04
SYCN-201ENST00000318438 XIRP1Q702N8 1843 aaKnown RBP21.51■■□□□ 1.03
SYCN-201ENST00000318438 SRCAPQ6ZRS2 3230 aa21.5■■□□□ 1.03
SYCN-201ENST00000318438 MTUS2Q5JR59 1369 aa21.49■■□□□ 1.03
SYCN-201ENST00000318438 TIAM1Q13009 1591 aa21.49■■□□□ 1.03
SYCN-201ENST00000318438 SCAF11Q99590 1463 aaKnown RBP21.48■■□□□ 1.03
SYCN-201ENST00000318438 LTKP29376 864 aa21.47■■□□□ 1.03
SYCN-201ENST00000318438 UPF1Q92900 1129 aaKnown RBP eCLIP21.46■■□□□ 1.03
SYCN-201ENST00000318438 ERVK-7P63135 1459 aa21.45■■□□□ 1.02
SYCN-201ENST00000318438 CCDC141Q6ZP82 1450 aa21.45■■□□□ 1.02
SYCN-201ENST00000318438 ROBO1Q9Y6N7 1651 aa21.44■■□□□ 1.02
SYCN-201ENST00000318438 TXNDC2Q86VQ3 553 aa21.43■■□□□ 1.02
SYCN-201ENST00000318438 TMEM94Q12767 1356 aa21.43■■□□□ 1.02
SYCN-201ENST00000318438 NCOA2Q15596 1464 aa21.43■■□□□ 1.02
SYCN-201ENST00000318438 ABCC3O15438 1527 aa21.43■■□□□ 1.02
SYCN-201ENST00000318438 UBR1Q8IWV7 1749 aa21.42■■□□□ 1.02
SYCN-201ENST00000318438 RBM33Q96EV2 1170 aaKnown RBP21.4■■□□□ 1.02
SYCN-201ENST00000318438 ARHGAP23Q9P227 1491 aa21.39■■□□□ 1.02
SYCN-201ENST00000318438 SLIT1O75093 1534 aa21.38■■□□□ 1.01
SYCN-201ENST00000318438 TRIM52Q96A61 297 aa21.37■■□□□ 1.01
SYCN-201ENST00000318438 MAP3K1Q13233 1512 aa21.36■■□□□ 1.01
SYCN-201ENST00000318438 CAMSAP2Q08AD1 1489 aa21.36■■□□□ 1.01
SYCN-201ENST00000318438 EID1Q9Y6B2 187 aa21.35■■□□□ 1.01
SYCN-201ENST00000318438 JCADQ9P266 1359 aa21.35■■□□□ 1.01
SYCN-201ENST00000318438 CEP162Q5TB80 1403 aa21.33■■□□□ 1.01
SYCN-201ENST00000318438 PROSER2Q86WR7 435 aaPredicted RBP21.33■■□□□ 1.01
SYCN-201ENST00000318438 EHBP1L1Q8N3D4 1523 aa21.33■■□□□ 1
SYCN-201ENST00000318438 LRRC9Q6ZRR7 1453 aa21.32■■□□□ 1
SYCN-201ENST00000318438 RSPH4AQ5TD94 716 aa21.32■■□□□ 1
SYCN-201ENST00000318438 LRP6O75581 1613 aa21.31■■□□□ 1
SYCN-201ENST00000318438 KCNA6P17658 529 aa21.31■■□□□ 1
SYCN-201ENST00000318438 PHLPP1O60346 1717 aa21.31■■□□□ 1
SYCN-201ENST00000318438 TSPY4P0CV99 314 aa21.29■■□□□ 1
SYCN-201ENST00000318438 TSPY10P0CW01 314 aa21.29■■□□□ 1
SYCN-201ENST00000318438 MROH1Q8NDA8 1641 aa21.29■■□□□ 1
SYCN-201ENST00000318438 CFAP65Q6ZU64 1925 aaKnown RBP21.28■■□□□ 1
SYCN-201ENST00000318438 TMEM2Q9UHN6 1383 aa21.28■■□□□ 1
SYCN-201ENST00000318438 MEX3CQ5U5Q3 659 aaKnown RBP21.28■■□□□ 1
SYCN-201ENST00000318438 SLC26A8Q96RN1 970 aa21.28■■□□□ 1
SYCN-201ENST00000318438 CEP152O94986 1710 aa21.27■■□□□ 1
SYCN-201ENST00000318438 ZNF772Q68DY9 489 aaPredicted RBP21.27■■□□□ 1
SYCN-201ENST00000318438 SLAIN2Q9P270 581 aa21.27■■□□□ 1
SYCN-201ENST00000318438 PRDM15P57071 1507 aaPredicted RBP21.26■□□□□ 0.99
SYCN-201ENST00000318438 MSH6P52701 1360 aa21.25■□□□□ 0.99
SYCN-201ENST00000318438 ARHGEF5Q12774 1597 aa21.25■□□□□ 0.99
SYCN-201ENST00000318438 COL16A1Q07092 1604 aaPredicted RBP21.24■□□□□ 0.99
SYCN-201ENST00000318438 PIK3C2BO00750 1634 aa21.23■□□□□ 0.99
SYCN-201ENST00000318438 EIF2AK4Q9P2K8 1649 aaKnown RBP21.22■□□□□ 0.99
SYCN-201ENST00000318438 RXRBP28702 533 aa21.22■□□□□ 0.99
SYCN-201ENST00000318438 STAG3Q9UJ98 1225 aa21.22■□□□□ 0.99
SYCN-201ENST00000318438 SPATA31A6Q5VVP1 1343 aa21.22■□□□□ 0.99
SYCN-201ENST00000318438 NKTRP30414 1462 aaKnown RBP21.21■□□□□ 0.99
SYCN-201ENST00000318438 TET3O43151 1660 aa21.2■□□□□ 0.98
SYCN-201ENST00000318438 ARHGAP31Q2M1Z3 1444 aa21.19■□□□□ 0.98
SYCN-201ENST00000318438 NWD1Q149M9 1564 aa21.19■□□□□ 0.98
SYCN-201ENST00000318438 FGD6Q6ZV73 1430 aa21.17■□□□□ 0.98
SYCN-201ENST00000318438 EFCAB6Q5THR3 1501 aa21.17■□□□□ 0.98
SYCN-201ENST00000318438 MAST1Q9Y2H9 1570 aa21.16■□□□□ 0.98
SYCN-201ENST00000318438 CDK12Q9NYV4 1490 aaPredicted RBP21.15■□□□□ 0.98
SYCN-201ENST00000318438 IDI1Q13907 227 aa21.13■□□□□ 0.97
SYCN-201ENST00000318438 BCANQ96GW7 911 aa21.13■□□□□ 0.97
SYCN-201ENST00000318438 NUTM2BA6NNL0 878 aaPredicted RBP21.11■□□□□ 0.97
SYCN-201ENST00000318438 NUTM2EB1AL46 878 aaPredicted RBP21.11■□□□□ 0.97
SYCN-201ENST00000318438 NUTM2AQ8IVF1 878 aaPredicted RBP21.11■□□□□ 0.97
SYCN-201ENST00000318438 KDM5AP29375 1690 aaKnown RBP21.1■□□□□ 0.97
SYCN-201ENST00000318438 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.1■□□□□ 0.97
SYCN-201ENST00000318438 DUOX2Q9NRD8 1548 aa21.09■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 99.1 ms