RNA–Protein interactions for RNA: ENST00000317633.13

SERF1A-201, Transcript of small EDRK-rich factor 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SERF1A, Length 963 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SERF1A-201ENST00000317633 LTBP4Q8N2S1 1624 aa31.75■■■□□ 2.67
SERF1A-201ENST00000317633 NCKAP5LQ9HCH0 1330 aa31.75■■■□□ 2.67
SERF1A-201ENST00000317633 KDM5DQ9BY66 1539 aa31.74■■■□□ 2.67
SERF1A-201ENST00000317633 WASHC2CQ9Y4E1 1318 aa31.72■■■□□ 2.67
SERF1A-201ENST00000317633 A2ML1A8K2U0 1454 aa31.71■■■□□ 2.67
SERF1A-201ENST00000317633 IQSEC2Q5JU85 1478 aa31.7■■■□□ 2.66
SERF1A-201ENST00000317633 KANK4Q5T7N3 995 aaPredicted RBP31.69■■■□□ 2.66
SERF1A-201ENST00000317633 PZPP20742 1482 aa31.68■■■□□ 2.66
SERF1A-201ENST00000317633 TCOF1Q13428 1488 aaKnown RBP31.68■■■□□ 2.66
SERF1A-201ENST00000317633 MAST1Q9Y2H9 1570 aa31.68■■■□□ 2.66
SERF1A-201ENST00000317633 MIA2Q96PC5 1412 aa31.67■■■□□ 2.66
SERF1A-201ENST00000317633 DNMT1P26358 1616 aaKnown RBP31.67■■■□□ 2.66
SERF1A-201ENST00000317633 MYOM3Q5VTT5 1437 aa31.66■■■□□ 2.66
SERF1A-201ENST00000317633 TNRQ92752 1358 aa31.66■■■□□ 2.66
SERF1A-201ENST00000317633 FBXO31Q5XUX0 539 aaPredicted RBP31.64■■■□□ 2.66
SERF1A-201ENST00000317633 APLP2Q06481 763 aa31.61■■■□□ 2.65
SERF1A-201ENST00000317633 RNF17Q9BXT8 1623 aaKnown RBP31.59■■■□□ 2.65
SERF1A-201ENST00000317633 ZNF335Q9H4Z2 1342 aaPredicted RBP31.58■■■□□ 2.65
SERF1A-201ENST00000317633 EIF2AK4Q9P2K8 1649 aaKnown RBP31.58■■■□□ 2.65
SERF1A-201ENST00000317633 ZC3H13Q5T200 1668 aaKnown RBP31.57■■■□□ 2.64
SERF1A-201ENST00000317633 POLR1AO95602 1720 aaPredicted RBP31.56■■■□□ 2.64
SERF1A-201ENST00000317633 NLRP1Q9C000 1473 aa31.54■■■□□ 2.64
SERF1A-201ENST00000317633 THEMISQ8N1K5 641 aaPredicted RBP31.52■■■□□ 2.64
SERF1A-201ENST00000317633 ABCC3O15438 1527 aa31.5■■■□□ 2.63
SERF1A-201ENST00000317633 DUOX2Q9NRD8 1548 aa31.49■■■□□ 2.63
SERF1A-201ENST00000317633 ANKLE2Q86XL3 938 aa31.48■■■□□ 2.63
SERF1A-201ENST00000317633 UGGT1Q9NYU2 1555 aa31.47■■■□□ 2.63
SERF1A-201ENST00000317633 PTPN23Q9H3S7 1636 aa31.46■■■□□ 2.63
SERF1A-201ENST00000317633 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP31.45■■■□□ 2.63
SERF1A-201ENST00000317633 NEURL4Q96JN8 1562 aa31.45■■■□□ 2.63
SERF1A-201ENST00000317633 SHANK2Q9UPX8 1470 aa31.45■■■□□ 2.62
SERF1A-201ENST00000317633 CROCC2H7BZ55 1655 aa31.44■■■□□ 2.62
SERF1A-201ENST00000317633 SPATA31D1Q6ZQQ2 1576 aa31.43■■■□□ 2.62
SERF1A-201ENST00000317633 MROH1Q8NDA8 1641 aa31.43■■■□□ 2.62
SERF1A-201ENST00000317633 CEP152O94986 1710 aa31.42■■■□□ 2.62
SERF1A-201ENST00000317633 UBAP1LF5GYI3 381 aa31.42■■■□□ 2.62
SERF1A-201ENST00000317633 KIF15Q9NS87 1388 aa31.41■■■□□ 2.62
SERF1A-201ENST00000317633 CFAP65Q6ZU64 1925 aaKnown RBP31.4■■■□□ 2.62
SERF1A-201ENST00000317633 DISP3Q9P2K9 1392 aa31.4■■■□□ 2.62
SERF1A-201ENST00000317633 ABCC5O15440 1437 aa31.4■■■□□ 2.62
SERF1A-201ENST00000317633 ERVK-7P63135 1459 aa31.39■■■□□ 2.62
SERF1A-201ENST00000317633 DEPDC5O75140 1603 aa31.38■■■□□ 2.61
SERF1A-201ENST00000317633 ERBINQ96RT1 1412 aa31.38■■■□□ 2.61
SERF1A-201ENST00000317633 CPS1P31327 1500 aa31.38■■■□□ 2.61
SERF1A-201ENST00000317633 FGD6Q6ZV73 1430 aa31.36■■■□□ 2.61
SERF1A-201ENST00000317633 RRP7BPQ9NSQ0 103 aa31.36■■■□□ 2.61
SERF1A-201ENST00000317633 MED14O60244 1454 aa31.35■■■□□ 2.61
SERF1A-201ENST00000317633 DAPK1P53355 1430 aa31.35■■■□□ 2.61
SERF1A-201ENST00000317633 NPHP4O75161 1426 aaPredicted RBP31.34■■■□□ 2.61
SERF1A-201ENST00000317633 PRDM15P57071 1507 aaPredicted RBP31.34■■■□□ 2.61
SERF1A-201ENST00000317633 IQGAP1P46940 1657 aa31.3■■■□□ 2.6
SERF1A-201ENST00000317633 ARHGAP31Q2M1Z3 1444 aa31.3■■■□□ 2.6
SERF1A-201ENST00000317633 KANK1Q14678 1352 aa31.28■■■□□ 2.6
SERF1A-201ENST00000317633 ANKRD30AQ9BXX3 1397 aa31.28■■■□□ 2.6
SERF1A-201ENST00000317633 UBR1Q8IWV7 1749 aa31.27■■■□□ 2.6
SERF1A-201ENST00000317633 VWDEQ8N2E2 1590 aa31.27■■■□□ 2.6
SERF1A-201ENST00000317633 GRWD1Q9BQ67 446 aaKnown RBP eCLIP31.26■■■□□ 2.59
SERF1A-201ENST00000317633 TOM1O60784 492 aa31.24■■■□□ 2.59
SERF1A-201ENST00000317633 CHIC2Q9UKJ5 165 aa31.23■■■□□ 2.59
SERF1A-201ENST00000317633 SCAF1Q9H7N4 1312 aaKnown RBP31.19■■■□□ 2.58
SERF1A-201ENST00000317633 SCAF11Q99590 1463 aaKnown RBP31.17■■■□□ 2.58
SERF1A-201ENST00000317633 PIP4K2BP78356 416 aa31.16■■■□□ 2.58
SERF1A-201ENST00000317633 ILDR2Q71H61 639 aa31.15■■■□□ 2.58
SERF1A-201ENST00000317633 SLIT1O75093 1534 aa31.14■■■□□ 2.58
SERF1A-201ENST00000317633 LMTK2Q8IWU2 1503 aa31.14■■■□□ 2.58
SERF1A-201ENST00000317633 ARHGAP23Q9P227 1491 aa31.14■■■□□ 2.57
SERF1A-201ENST00000317633 FAM50AQ14320 339 aaKnown RBP31.13■■■□□ 2.57
SERF1A-201ENST00000317633 TXNDC2Q86VQ3 553 aa31.13■■■□□ 2.57
SERF1A-201ENST00000317633 EID1Q9Y6B2 187 aa31.13■■■□□ 2.57
SERF1A-201ENST00000317633 ADGRL2O95490 1459 aa31.13■■■□□ 2.57
SERF1A-201ENST00000317633 STAG3Q9UJ98 1225 aa31.12■■■□□ 2.57
SERF1A-201ENST00000317633 PIK3C2BO00750 1634 aa31.12■■■□□ 2.57
SERF1A-201ENST00000317633 STRCP1A6NGW2 1772 aa31.11■■■□□ 2.57
SERF1A-201ENST00000317633 SYNMO15061 1565 aa31.1■■■□□ 2.57
SERF1A-201ENST00000317633 LTKP29376 864 aa31.09■■■□□ 2.57
SERF1A-201ENST00000317633 KDM5AP29375 1690 aaKnown RBP31.09■■■□□ 2.57
SERF1A-201ENST00000317633 LRRC7Q96NW7 1537 aa31.07■■■□□ 2.56
SERF1A-201ENST00000317633 HSPA1LP34931 641 aa31.06■■■□□ 2.56
SERF1A-201ENST00000317633 TMEM2Q9UHN6 1383 aa31.05■■■□□ 2.56
SERF1A-201ENST00000317633 EFCAB6Q5THR3 1501 aa31.04■■■□□ 2.56
SERF1A-201ENST00000317633 SOCS7O14512 581 aa31.03■■■□□ 2.56
SERF1A-201ENST00000317633 IDI1Q13907 227 aa31.03■■■□□ 2.56
SERF1A-201ENST00000317633 ANKRD50Q9ULJ7 1429 aa31.02■■■□□ 2.56
SERF1A-201ENST00000317633 NOS1P29475 1434 aa30.99■■■□□ 2.55
SERF1A-201ENST00000317633 SLC52A1Q9NWF4 448 aa30.98■■■□□ 2.55
SERF1A-201ENST00000317633 ALKQ9UM73 1620 aa30.98■■■□□ 2.55
SERF1A-201ENST00000317633 RPRD2Q5VT52 1461 aaKnown RBP30.96■■■□□ 2.55
SERF1A-201ENST00000317633 ADGRB3O60242 1522 aa30.93■■■□□ 2.54
SERF1A-201ENST00000317633 TET3O43151 1660 aa30.92■■■□□ 2.54
SERF1A-201ENST00000317633 GCC2Q8IWJ2 1684 aa30.88■■■□□ 2.53
SERF1A-201ENST00000317633 XIRP1Q702N8 1843 aaKnown RBP30.88■■■□□ 2.53
SERF1A-201ENST00000317633 MED1Q15648 1581 aaPredicted RBP30.88■■■□□ 2.53
SERF1A-201ENST00000317633 UNC13BO14795 1591 aa30.86■■■□□ 2.53
SERF1A-201ENST00000317633 ROCK1Q13464 1354 aa30.85■■■□□ 2.53
SERF1A-201ENST00000317633 KCNA6P17658 529 aa30.83■■■□□ 2.53
SERF1A-201ENST00000317633 SLC26A8Q96RN1 970 aa30.83■■■□□ 2.53
SERF1A-201ENST00000317633 HDGFP51858 240 aaKnown RBP30.82■■■□□ 2.52
SERF1A-201ENST00000317633 BCANQ96GW7 911 aa30.82■■■□□ 2.52
SERF1A-201ENST00000317633 MYO5BQ9ULV0 1848 aa30.81■■■□□ 2.52
SERF1A-201ENST00000317633 SENP3Q9H4L4 574 aaPredicted RBP30.78■■■□□ 2.52
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms