RNA–Protein interactions for RNA: ENST00000313433.11

RPA2-201, Transcript of replication protein A2, humanhuman

TSL 1 (best) BASIC

Gene RPA2, Length 1,237 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA2-201ENST00000313433 NPATQ14207 1427 aa28.53■■■□□ 2.16
RPA2-201ENST00000313433 PTPRKQ15262 1439 aa28.53■■■□□ 2.16
RPA2-201ENST00000313433 UHRF1BP1Q6BDS2 1440 aa28.53■■■□□ 2.16
RPA2-201ENST00000313433 STRCQ7RTU9 1775 aa28.53■■■□□ 2.16
RPA2-201ENST00000313433 FAM135AQ9P2D6 1515 aa28.53■■■□□ 2.16
RPA2-201ENST00000313433 MYO3AQ8NEV4 1616 aa28.52■■■□□ 2.16
RPA2-201ENST00000313433 PPP6R1Q9UPN7 881 aa28.5■■■□□ 2.15
RPA2-201ENST00000313433 ZNF142P52746 1687 aaPredicted RBP28.49■■■□□ 2.15
RPA2-201ENST00000313433 KIF15Q9NS87 1388 aa28.49■■■□□ 2.15
RPA2-201ENST00000313433 CEP152O94986 1710 aa28.47■■■□□ 2.15
RPA2-201ENST00000313433 PPARGC1BQ86YN6 1023 aaKnown RBP28.47■■■□□ 2.15
RPA2-201ENST00000313433 ZC3H13Q5T200 1668 aaKnown RBP28.46■■■□□ 2.15
RPA2-201ENST00000313433 ABCC3O15438 1527 aa28.46■■■□□ 2.15
RPA2-201ENST00000313433 DEPDC5O75140 1603 aa28.45■■■□□ 2.14
RPA2-201ENST00000313433 ADGRL2O95490 1459 aa28.45■■■□□ 2.14
RPA2-201ENST00000313433 PZPP20742 1482 aa28.43■■■□□ 2.14
RPA2-201ENST00000313433 PRDM15P57071 1507 aaPredicted RBP28.43■■■□□ 2.14
RPA2-201ENST00000313433 ERBINQ96RT1 1412 aa28.43■■■□□ 2.14
RPA2-201ENST00000313433 RRP7BPQ9NSQ0 103 aa28.41■■■□□ 2.14
RPA2-201ENST00000313433 NCOA1Q15788 1441 aa28.41■■■□□ 2.14
RPA2-201ENST00000313433 CHIC2Q9UKJ5 165 aa28.4■■■□□ 2.14
RPA2-201ENST00000313433 CEP170BQ9Y4F5 1589 aaPredicted RBP28.4■■■□□ 2.14
RPA2-201ENST00000313433 CAMSAP1Q5T5Y3 1602 aa28.4■■■□□ 2.14
RPA2-201ENST00000313433 FAM50AQ14320 339 aaKnown RBP28.39■■■□□ 2.14
RPA2-201ENST00000313433 WASHC2CQ9Y4E1 1318 aa28.37■■■□□ 2.13
RPA2-201ENST00000313433 ANKRD30AQ9BXX3 1397 aa28.36■■■□□ 2.13
RPA2-201ENST00000313433 FBXO31Q5XUX0 539 aaPredicted RBP28.35■■■□□ 2.13
RPA2-201ENST00000313433 VWDEQ8N2E2 1590 aa28.33■■■□□ 2.12
RPA2-201ENST00000313433 SPATA31D1Q6ZQQ2 1576 aa28.31■■■□□ 2.12
RPA2-201ENST00000313433 A2ML1A8K2U0 1454 aa28.29■■■□□ 2.12
RPA2-201ENST00000313433 TNRQ92752 1358 aa28.28■■■□□ 2.12
RPA2-201ENST00000313433 CFAP65Q6ZU64 1925 aaKnown RBP28.27■■■□□ 2.12
RPA2-201ENST00000313433 ERVK-7P63135 1459 aa28.26■■■□□ 2.11
RPA2-201ENST00000313433 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP28.24■■■□□ 2.11
RPA2-201ENST00000313433 LMTK2Q8IWU2 1503 aa28.23■■■□□ 2.11
RPA2-201ENST00000313433 RRBP1Q9P2E9 1410 aaKnown RBP28.23■■■□□ 2.11
RPA2-201ENST00000313433 PLA2R1Q13018 1463 aa28.22■■■□□ 2.11
RPA2-201ENST00000313433 PTPRTO14522 1441 aa28.21■■■□□ 2.11
RPA2-201ENST00000313433 ANKRD50Q9ULJ7 1429 aa28.21■■■□□ 2.11
RPA2-201ENST00000313433 ARHGAP31Q2M1Z3 1444 aa28.2■■■□□ 2.11
RPA2-201ENST00000313433 ROCK1Q13464 1354 aa28.19■■■□□ 2.1
RPA2-201ENST00000313433 NLRP1Q9C000 1473 aa28.19■■■□□ 2.1
RPA2-201ENST00000313433 UNC13BO14795 1591 aa28.19■■■□□ 2.1
RPA2-201ENST00000313433 POLR1AO95602 1720 aaPredicted RBP28.18■■■□□ 2.1
RPA2-201ENST00000313433 GRWD1Q9BQ67 446 aaKnown RBP eCLIP28.17■■■□□ 2.1
RPA2-201ENST00000313433 EFCAB6Q5THR3 1501 aa28.17■■■□□ 2.1
RPA2-201ENST00000313433 NEURL4Q96JN8 1562 aa28.16■■■□□ 2.1
RPA2-201ENST00000313433 NCKAP5LQ9HCH0 1330 aa28.15■■■□□ 2.1
RPA2-201ENST00000313433 ILDR1Q86SU0 546 aaPredicted RBP28.14■■■□□ 2.1
RPA2-201ENST00000313433 UGGT1Q9NYU2 1555 aa28.14■■■□□ 2.1
RPA2-201ENST00000313433 UBR1Q8IWV7 1749 aa28.14■■■□□ 2.1
RPA2-201ENST00000313433 KANK1Q14678 1352 aa28.11■■■□□ 2.09
RPA2-201ENST00000313433 SYNMO15061 1565 aa28.11■■■□□ 2.09
RPA2-201ENST00000313433 ITGAEP38570 1179 aa28.1■■■□□ 2.09
RPA2-201ENST00000313433 TET3O43151 1660 aa28.1■■■□□ 2.09
RPA2-201ENST00000313433 DMRT2Q9Y5R5 561 aa28.09■■■□□ 2.09
RPA2-201ENST00000313433 LTBP4Q8N2S1 1624 aa28.09■■■□□ 2.09
RPA2-201ENST00000313433 PIK3C2BO00750 1634 aa28.07■■■□□ 2.08
RPA2-201ENST00000313433 GCC2Q8IWJ2 1684 aa28.07■■■□□ 2.08
RPA2-201ENST00000313433 IQGAP3Q86VI3 1631 aa28.06■■■□□ 2.08
RPA2-201ENST00000313433 PKD2Q13563 968 aa28.04■■■□□ 2.08
RPA2-201ENST00000313433 NOS1P29475 1434 aa28.03■■■□□ 2.08
RPA2-201ENST00000313433 E9PCH4 1651 aa28.03■■■□□ 2.08
RPA2-201ENST00000313433 CERKQ8TCT0 537 aa27.99■■■□□ 2.07
RPA2-201ENST00000313433 KDM5AP29375 1690 aaKnown RBP27.99■■■□□ 2.07
RPA2-201ENST00000313433 RPRD2Q5VT52 1461 aaKnown RBP27.98■■■□□ 2.07
RPA2-201ENST00000313433 MED14O60244 1454 aa27.96■■■□□ 2.07
RPA2-201ENST00000313433 ARHGAP23Q9P227 1491 aa27.96■■■□□ 2.07
RPA2-201ENST00000313433 THEMISQ8N1K5 641 aaPredicted RBP27.96■■■□□ 2.07
RPA2-201ENST00000313433 SLIT1O75093 1534 aa27.96■■■□□ 2.07
RPA2-201ENST00000313433 NAIPQ13075 1403 aa27.95■■■□□ 2.07
RPA2-201ENST00000313433 IQGAP1P46940 1657 aa27.95■■■□□ 2.07
RPA2-201ENST00000313433 FBXO41Q8TF61 875 aa27.95■■■□□ 2.06
RPA2-201ENST00000313433 ZNF335Q9H4Z2 1342 aaPredicted RBP27.93■■■□□ 2.06
RPA2-201ENST00000313433 MYO5BQ9ULV0 1848 aa27.92■■■□□ 2.06
RPA2-201ENST00000313433 ADGRB3O60242 1522 aa27.92■■■□□ 2.06
RPA2-201ENST00000313433 IDI1Q13907 227 aa27.9■■■□□ 2.06
RPA2-201ENST00000313433 NPHP4O75161 1426 aaPredicted RBP27.9■■■□□ 2.06
RPA2-201ENST00000313433 ANKLE2Q86XL3 938 aa27.89■■■□□ 2.06
RPA2-201ENST00000313433 NUP155O75694 1391 aa27.87■■■□□ 2.05
RPA2-201ENST00000313433 SCAF11Q99590 1463 aaKnown RBP27.87■■■□□ 2.05
RPA2-201ENST00000313433 STRCP1A6NGW2 1772 aa27.86■■■□□ 2.05
RPA2-201ENST00000313433 HFM1A2PYH4 1435 aa27.86■■■□□ 2.05
RPA2-201ENST00000313433 TMEM131LA2VDJ0 1609 aa27.85■■■□□ 2.05
RPA2-201ENST00000313433 LTKP29376 864 aa27.85■■■□□ 2.05
RPA2-201ENST00000313433 TMEM2Q9UHN6 1383 aa27.83■■■□□ 2.05
RPA2-201ENST00000313433 IQSEC2Q5JU85 1478 aa27.82■■■□□ 2.04
RPA2-201ENST00000313433 SPHKAPQ2M3C7 1700 aa27.81■■■□□ 2.04
RPA2-201ENST00000313433 SLC52A1Q9NWF4 448 aa27.77■■■□□ 2.04
RPA2-201ENST00000313433 ZFYVE9O95405 1425 aa27.75■■■□□ 2.03
RPA2-201ENST00000313433 TXNDC2Q86VQ3 553 aa27.74■■■□□ 2.03
RPA2-201ENST00000313433 CPS1P31327 1500 aa27.73■■■□□ 2.03
RPA2-201ENST00000313433 STAG3Q9UJ98 1225 aa27.71■■■□□ 2.03
RPA2-201ENST00000313433 CLTCL1P53675 1640 aa27.7■■■□□ 2.02
RPA2-201ENST00000313433 TRPM2O94759 1503 aa27.67■■■□□ 2.02
RPA2-201ENST00000313433 XIRP1Q702N8 1843 aaKnown RBP27.65■■■□□ 2.02
RPA2-201ENST00000313433 EID1Q9Y6B2 187 aa27.65■■■□□ 2.02
RPA2-201ENST00000313433 RIMS2Q9UQ26 1411 aa27.65■■■□□ 2.02
RPA2-201ENST00000313433 ALKQ9UM73 1620 aa27.64■■■□□ 2.02
RPA2-201ENST00000313433 LRRC7Q96NW7 1537 aa27.62■■■□□ 2.01
Retrieved 100 of 20,778 RNA–protein pairs in 802.8 ms