RNA–Protein interactions for RNA: ENST00000312990.10

CDK4-202, Transcript of cyclin dependent kinase 4, humanhuman

TSL 1 (best) BASIC

Gene CDK4, Length 1,650 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK4-202ENST00000312990 AGLP35573 1532 aa27.86■■■□□ 2.05
CDK4-202ENST00000312990 PRDM15P57071 1507 aaPredicted RBP27.83■■■□□ 2.05
CDK4-202ENST00000312990 KDM5DQ9BY66 1539 aa27.82■■■□□ 2.04
CDK4-202ENST00000312990 KIF3BO15066 747 aa27.82■■■□□ 2.04
CDK4-202ENST00000312990 IQGAP3Q86VI3 1631 aa27.81■■■□□ 2.04
CDK4-202ENST00000312990 VWDEQ8N2E2 1590 aa27.78■■■□□ 2.04
CDK4-202ENST00000312990 TRIM52Q96A61 297 aa27.77■■■□□ 2.04
CDK4-202ENST00000312990 PZPP20742 1482 aa27.77■■■□□ 2.04
CDK4-202ENST00000312990 CEP152O94986 1710 aa27.77■■■□□ 2.04
CDK4-202ENST00000312990 ACIN1Q9UKV3 1341 aaKnown RBP27.76■■■□□ 2.03
CDK4-202ENST00000312990 NUP155O75694 1391 aa27.75■■■□□ 2.03
CDK4-202ENST00000312990 FAM135AQ9P2D6 1515 aa27.75■■■□□ 2.03
CDK4-202ENST00000312990 DHX57Q6P158 1386 aaKnown RBP27.73■■■□□ 2.03
CDK4-202ENST00000312990 GRWD1Q9BQ67 446 aaKnown RBP eCLIP27.72■■■□□ 2.03
CDK4-202ENST00000312990 GGT6Q6P531 493 aa27.7■■■□□ 2.02
CDK4-202ENST00000312990 ZC3H13Q5T200 1668 aaKnown RBP27.7■■■□□ 2.02
CDK4-202ENST00000312990 TET3O43151 1660 aa27.69■■■□□ 2.02
CDK4-202ENST00000312990 ABCC3O15438 1527 aa27.66■■■□□ 2.02
CDK4-202ENST00000312990 KANK1Q14678 1352 aa27.65■■■□□ 2.02
CDK4-202ENST00000312990 MPHOSPH9Q99550 1183 aa27.65■■■□□ 2.02
CDK4-202ENST00000312990 LMTK2Q8IWU2 1503 aa27.65■■■□□ 2.02
CDK4-202ENST00000312990 ARID4BQ4LE39 1312 aaPredicted RBP27.65■■■□□ 2.02
CDK4-202ENST00000312990 E9PCH4 1651 aa27.64■■■□□ 2.02
CDK4-202ENST00000312990 CLTCQ00610 1675 aaKnown RBP27.64■■■□□ 2.01
CDK4-202ENST00000312990 CAMSAP1Q5T5Y3 1602 aa27.63■■■□□ 2.01
CDK4-202ENST00000312990 SLC4A1APQ9BWU0 796 aaKnown RBP27.63■■■□□ 2.01
CDK4-202ENST00000312990 CFAP65Q6ZU64 1925 aaKnown RBP27.62■■■□□ 2.01
CDK4-202ENST00000312990 MLECQ14165 292 aa27.61■■■□□ 2.01
CDK4-202ENST00000312990 EFCAB6Q5THR3 1501 aa27.61■■■□□ 2.01
CDK4-202ENST00000312990 FER1L4A9Z1Z3 1794 aa27.61■■■□□ 2.01
CDK4-202ENST00000312990 WASHC2CQ9Y4E1 1318 aa27.57■■■□□ 2
CDK4-202ENST00000312990 PKD2Q13563 968 aa27.56■■■□□ 2
CDK4-202ENST00000312990 CCER1Q8TC90 406 aaPredicted RBP27.56■■■□□ 2
CDK4-202ENST00000312990 PPP6R1Q9UPN7 881 aa27.56■■■□□ 2
CDK4-202ENST00000312990 FOXD1Q16676 465 aa27.54■■■□□ 2
CDK4-202ENST00000312990 ADAMTSL3P82987 1691 aa27.54■■■□□ 2
CDK4-202ENST00000312990 MROH2AA6NES4 1674 aa27.53■■■□□ 2
CDK4-202ENST00000312990 SPHKAPQ2M3C7 1700 aa27.52■■■□□ 2
CDK4-202ENST00000312990 MADDQ8WXG6 1647 aa27.51■■□□□ 1.99
CDK4-202ENST00000312990 NPATQ14207 1427 aa27.49■■□□□ 1.99
CDK4-202ENST00000312990 RPRD2Q5VT52 1461 aaKnown RBP27.48■■□□□ 1.99
CDK4-202ENST00000312990 ARHGAP31Q2M1Z3 1444 aa27.47■■□□□ 1.99
CDK4-202ENST00000312990 RIMS1Q86UR5 1692 aaKnown RBP27.46■■□□□ 1.99
CDK4-202ENST00000312990 PREX1Q8TCU6 1659 aa27.46■■□□□ 1.99
CDK4-202ENST00000312990 ANKRD30BQ9BXX2 1392 aa27.46■■□□□ 1.99
CDK4-202ENST00000312990 CNTLNQ9NXG0 1405 aa27.45■■□□□ 1.99
CDK4-202ENST00000312990 C3P01024 1663 aa27.45■■□□□ 1.98
CDK4-202ENST00000312990 CLSPNQ9HAW4 1339 aa27.45■■□□□ 1.98
CDK4-202ENST00000312990 PLA2R1Q13018 1463 aa27.44■■□□□ 1.98
CDK4-202ENST00000312990 PTPRTO14522 1441 aa27.41■■□□□ 1.98
CDK4-202ENST00000312990 ESF1Q9H501 851 aaKnown RBP27.41■■□□□ 1.98
CDK4-202ENST00000312990 TRPM2O94759 1503 aa27.41■■□□□ 1.98
CDK4-202ENST00000312990 ZMYM3Q14202 1370 aa27.39■■□□□ 1.98
CDK4-202ENST00000312990 SYNMO15061 1565 aa27.38■■□□□ 1.97
CDK4-202ENST00000312990 NOS1P29475 1434 aa27.37■■□□□ 1.97
CDK4-202ENST00000312990 CLTCL1P53675 1640 aa27.35■■□□□ 1.97
CDK4-202ENST00000312990 SPATA31D1Q6ZQQ2 1576 aa27.35■■□□□ 1.97
CDK4-202ENST00000312990 ERVK-7P63135 1459 aa27.35■■□□□ 1.97
CDK4-202ENST00000312990 UGGT1Q9NYU2 1555 aa27.33■■□□□ 1.97
CDK4-202ENST00000312990 SIN3AQ96ST3 1273 aa27.33■■□□□ 1.97
CDK4-202ENST00000312990 PIK3C2BO00750 1634 aa27.33■■□□□ 1.97
CDK4-202ENST00000312990 FBXO31Q5XUX0 539 aaPredicted RBP27.31■■□□□ 1.96
CDK4-202ENST00000312990 KIF1BO60333 1816 aa27.3■■□□□ 1.96
CDK4-202ENST00000312990 CCDC144AA2RUR9 1427 aa27.3■■□□□ 1.96
CDK4-202ENST00000312990 CEBPAP49715 358 aaPredicted RBP27.27■■□□□ 1.96
CDK4-202ENST00000312990 NEUROD1Q13562 356 aa27.25■■□□□ 1.95
CDK4-202ENST00000312990 MYO5BQ9ULV0 1848 aa27.25■■□□□ 1.95
CDK4-202ENST00000312990 PTPRMP28827 1452 aa27.23■■□□□ 1.95
CDK4-202ENST00000312990 SETD1BQ9UPS6 1966 aaKnown RBP27.22■■□□□ 1.95
CDK4-202ENST00000312990 KDM4FA0A1W2PPD8 638 aa27.19■■□□□ 1.94
CDK4-202ENST00000312990 TNRQ92752 1358 aa27.18■■□□□ 1.94
CDK4-202ENST00000312990 PLPPR3Q6T4P5 718 aa27.17■■□□□ 1.94
CDK4-202ENST00000312990 NEURL4Q96JN8 1562 aa27.17■■□□□ 1.94
CDK4-202ENST00000312990 MYO3AQ8NEV4 1616 aa27.17■■□□□ 1.94
CDK4-202ENST00000312990 ADGRB3O60242 1522 aa27.17■■□□□ 1.94
CDK4-202ENST00000312990 SPATA31E1Q6ZUB1 1445 aa27.17■■□□□ 1.94
CDK4-202ENST00000312990 TMEM131LA2VDJ0 1609 aa27.16■■□□□ 1.94
CDK4-202ENST00000312990 SLC52A1Q9NWF4 448 aa27.16■■□□□ 1.94
CDK4-202ENST00000312990 IDI1Q13907 227 aa27.15■■□□□ 1.94
CDK4-202ENST00000312990 KDM5AP29375 1690 aaKnown RBP27.13■■□□□ 1.93
CDK4-202ENST00000312990 UBR1Q8IWV7 1749 aa27.12■■□□□ 1.93
CDK4-202ENST00000312990 IFT172Q9UG01 1749 aa27.12■■□□□ 1.93
CDK4-202ENST00000312990 TONSLQ96HA7 1378 aa27.11■■□□□ 1.93
CDK4-202ENST00000312990 NLRP1Q9C000 1473 aa27.1■■□□□ 1.93
CDK4-202ENST00000312990 ZNF142P52746 1687 aaPredicted RBP27.09■■□□□ 1.93
CDK4-202ENST00000312990 PPLO60437 1756 aa27.08■■□□□ 1.93
CDK4-202ENST00000312990 TIMELESSQ9UNS1 1208 aa27.06■■□□□ 1.92
CDK4-202ENST00000312990 L3MBTL2Q969R5 705 aa27.05■■□□□ 1.92
CDK4-202ENST00000312990 RGL3Q3MIN7 710 aa27.05■■□□□ 1.92
CDK4-202ENST00000312990 CEP170BQ9Y4F5 1589 aaPredicted RBP27.05■■□□□ 1.92
CDK4-202ENST00000312990 ZEB1P37275 1124 aaPredicted RBP27.04■■□□□ 1.92
CDK4-202ENST00000312990 A2ML1A8K2U0 1454 aa27.04■■□□□ 1.92
CDK4-202ENST00000312990 CHGAP10645 457 aaKnown RBP27.03■■□□□ 1.92
CDK4-202ENST00000312990 NEXMIFQ5QGS0 1516 aa27■■□□□ 1.91
CDK4-202ENST00000312990 STAG3Q9UJ98 1225 aa26.96■■□□□ 1.91
CDK4-202ENST00000312990 ZNF326Q5BKZ1 582 aaKnown RBP26.95■■□□□ 1.91
CDK4-202ENST00000312990 DCAF11Q8TEB1 546 aa26.95■■□□□ 1.91
CDK4-202ENST00000312990 UHRF1BP1Q6BDS2 1440 aa26.94■■□□□ 1.9
CDK4-202ENST00000312990 PPP1R15AO75807 674 aaPredicted RBP26.93■■□□□ 1.9
CDK4-202ENST00000312990 MYOM2P54296 1465 aa26.92■■□□□ 1.9
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms