RNA–Protein interactions for RNA: ENST00000312989.11

PPP1CA-201, Transcript of protein phosphatase 1 catalytic subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene PPP1CA, Length 1,389 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1CA-201ENST00000312989 RNF17Q9BXT8 1623 aaKnown RBP22.81■■□□□ 1.24
PPP1CA-201ENST00000312989 KDM5DQ9BY66 1539 aa22.79■■□□□ 1.24
PPP1CA-201ENST00000312989 EIF2AK4Q9P2K8 1649 aaKnown RBP22.77■■□□□ 1.24
PPP1CA-201ENST00000312989 DUOX2Q9NRD8 1548 aa22.77■■□□□ 1.24
PPP1CA-201ENST00000312989 KIF15Q9NS87 1388 aa22.76■■□□□ 1.23
PPP1CA-201ENST00000312989 SETD1BQ9UPS6 1966 aaKnown RBP22.74■■□□□ 1.23
PPP1CA-201ENST00000312989 PZPP20742 1482 aa22.73■■□□□ 1.23
PPP1CA-201ENST00000312989 ABCC3O15438 1527 aa22.73■■□□□ 1.23
PPP1CA-201ENST00000312989 ADGRL2O95490 1459 aa22.72■■□□□ 1.23
PPP1CA-201ENST00000312989 MYO3AQ8NEV4 1616 aa22.72■■□□□ 1.23
PPP1CA-201ENST00000312989 STRCQ7RTU9 1775 aa22.72■■□□□ 1.23
PPP1CA-201ENST00000312989 NCOA1Q15788 1441 aa22.72■■□□□ 1.23
PPP1CA-201ENST00000312989 ERBINQ96RT1 1412 aa22.72■■□□□ 1.23
PPP1CA-201ENST00000312989 ZNF142P52746 1687 aaPredicted RBP22.69■■□□□ 1.22
PPP1CA-201ENST00000312989 PRDM15P57071 1507 aaPredicted RBP22.69■■□□□ 1.22
PPP1CA-201ENST00000312989 FBXO31Q5XUX0 539 aaPredicted RBP22.69■■□□□ 1.22
PPP1CA-201ENST00000312989 RRP7BPQ9NSQ0 103 aa22.69■■□□□ 1.22
PPP1CA-201ENST00000312989 WASHC2CQ9Y4E1 1318 aa22.68■■□□□ 1.22
PPP1CA-201ENST00000312989 CEP170BQ9Y4F5 1589 aaPredicted RBP22.67■■□□□ 1.22
PPP1CA-201ENST00000312989 DEPDC5O75140 1603 aa22.66■■□□□ 1.22
PPP1CA-201ENST00000312989 CHIC2Q9UKJ5 165 aa22.65■■□□□ 1.22
PPP1CA-201ENST00000312989 ZC3H13Q5T200 1668 aaKnown RBP22.65■■□□□ 1.22
PPP1CA-201ENST00000312989 ANKRD30AQ9BXX3 1397 aa22.65■■□□□ 1.22
PPP1CA-201ENST00000312989 TNRQ92752 1358 aa22.63■■□□□ 1.21
PPP1CA-201ENST00000312989 CAMSAP1Q5T5Y3 1602 aa22.63■■□□□ 1.21
PPP1CA-201ENST00000312989 FAM50AQ14320 339 aaKnown RBP22.63■■□□□ 1.21
PPP1CA-201ENST00000312989 A2ML1A8K2U0 1454 aa22.62■■□□□ 1.21
PPP1CA-201ENST00000312989 SPATA31D1Q6ZQQ2 1576 aa22.62■■□□□ 1.21
PPP1CA-201ENST00000312989 VWDEQ8N2E2 1590 aa22.62■■□□□ 1.21
PPP1CA-201ENST00000312989 PPARGC1BQ86YN6 1023 aaKnown RBP22.62■■□□□ 1.21
PPP1CA-201ENST00000312989 PLA2R1Q13018 1463 aa22.61■■□□□ 1.21
PPP1CA-201ENST00000312989 PTPRTO14522 1441 aa22.6■■□□□ 1.21
PPP1CA-201ENST00000312989 ILDR1Q86SU0 546 aaPredicted RBP22.6■■□□□ 1.21
PPP1CA-201ENST00000312989 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.59■■□□□ 1.215e-6■■■■■ 46.2
PPP1CA-201ENST00000312989 ERVK-7P63135 1459 aa22.59■■□□□ 1.21
PPP1CA-201ENST00000312989 ARHGAP31Q2M1Z3 1444 aa22.58■■□□□ 1.21
PPP1CA-201ENST00000312989 CEP152O94986 1710 aa22.58■■□□□ 1.2
PPP1CA-201ENST00000312989 LMTK2Q8IWU2 1503 aa22.58■■□□□ 1.2
PPP1CA-201ENST00000312989 NLRP1Q9C000 1473 aa22.55■■□□□ 1.2
PPP1CA-201ENST00000312989 ANKRD50Q9ULJ7 1429 aa22.54■■□□□ 1.2
PPP1CA-201ENST00000312989 ROCK1Q13464 1354 aa22.54■■□□□ 1.2
PPP1CA-201ENST00000312989 RRBP1Q9P2E9 1410 aaKnown RBP22.53■■□□□ 1.2
PPP1CA-201ENST00000312989 DMRT2Q9Y5R5 561 aa22.52■■□□□ 1.2
PPP1CA-201ENST00000312989 NCKAP5LQ9HCH0 1330 aa22.51■■□□□ 1.19
PPP1CA-201ENST00000312989 NEURL4Q96JN8 1562 aa22.49■■□□□ 1.19
PPP1CA-201ENST00000312989 LTBP4Q8N2S1 1624 aa22.48■■□□□ 1.19
PPP1CA-201ENST00000312989 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.48■■□□□ 1.19
PPP1CA-201ENST00000312989 EFCAB6Q5THR3 1501 aa22.47■■□□□ 1.19
PPP1CA-201ENST00000312989 UGGT1Q9NYU2 1555 aa22.47■■□□□ 1.19
PPP1CA-201ENST00000312989 PKD2Q13563 968 aa22.46■■□□□ 1.19
PPP1CA-201ENST00000312989 UNC13BO14795 1591 aa22.45■■□□□ 1.18
PPP1CA-201ENST00000312989 KANK1Q14678 1352 aa22.44■■□□□ 1.18
PPP1CA-201ENST00000312989 CERKQ8TCT0 537 aa22.44■■□□□ 1.18
PPP1CA-201ENST00000312989 NOS1P29475 1434 aa22.43■■□□□ 1.18
PPP1CA-201ENST00000312989 FBXO41Q8TF61 875 aa22.43■■□□□ 1.18
PPP1CA-201ENST00000312989 SYNMO15061 1565 aa22.41■■□□□ 1.18
PPP1CA-201ENST00000312989 MED14O60244 1454 aa22.4■■□□□ 1.18
PPP1CA-201ENST00000312989 UBR1Q8IWV7 1749 aa22.38■■□□□ 1.17
PPP1CA-201ENST00000312989 ARHGAP23Q9P227 1491 aa22.38■■□□□ 1.17
PPP1CA-201ENST00000312989 ITGAEP38570 1179 aa22.38■■□□□ 1.17
PPP1CA-201ENST00000312989 THEMISQ8N1K5 641 aaPredicted RBP22.38■■□□□ 1.17
PPP1CA-201ENST00000312989 ZNF335Q9H4Z2 1342 aaPredicted RBP22.37■■□□□ 1.17
PPP1CA-201ENST00000312989 POLR1AO95602 1720 aaPredicted RBP22.36■■□□□ 1.17
PPP1CA-201ENST00000312989 RPRD2Q5VT52 1461 aaKnown RBP22.36■■□□□ 1.17
PPP1CA-201ENST00000312989 TET3O43151 1660 aa22.35■■□□□ 1.17
PPP1CA-201ENST00000312989 SLIT1O75093 1534 aa22.35■■□□□ 1.17
PPP1CA-201ENST00000312989 PIK3C2BO00750 1634 aa22.34■■□□□ 1.17
PPP1CA-201ENST00000312989 IQGAP3Q86VI3 1631 aa22.34■■□□□ 1.17
PPP1CA-201ENST00000312989 NAIPQ13075 1403 aa22.33■■□□□ 1.16
PPP1CA-201ENST00000312989 IDI1Q13907 227 aa22.32■■□□□ 1.16
PPP1CA-201ENST00000312989 ANKLE2Q86XL3 938 aa22.32■■□□□ 1.16
PPP1CA-201ENST00000312989 NPHP4O75161 1426 aaPredicted RBP22.32■■□□□ 1.16
PPP1CA-201ENST00000312989 IQSEC2Q5JU85 1478 aa22.29■■□□□ 1.16
PPP1CA-201ENST00000312989 KDM5AP29375 1690 aaKnown RBP22.29■■□□□ 1.16
PPP1CA-201ENST00000312989 CFAP65Q6ZU64 1925 aaKnown RBP22.29■■□□□ 1.16
PPP1CA-201ENST00000312989 GCC2Q8IWJ2 1684 aa22.28■■□□□ 1.16
PPP1CA-201ENST00000312989 SCAF11Q99590 1463 aaKnown RBP22.28■■□□□ 1.16
PPP1CA-201ENST00000312989 LTKP29376 864 aa22.28■■□□□ 1.16
PPP1CA-201ENST00000312989 E9PCH4 1651 aa22.28■■□□□ 1.16
PPP1CA-201ENST00000312989 TMEM2Q9UHN6 1383 aa22.27■■□□□ 1.16
PPP1CA-201ENST00000312989 ADGRB3O60242 1522 aa22.27■■□□□ 1.15
PPP1CA-201ENST00000312989 NUP155O75694 1391 aa22.26■■□□□ 1.15
PPP1CA-201ENST00000312989 HFM1A2PYH4 1435 aa22.26■■□□□ 1.15
PPP1CA-201ENST00000312989 IQGAP1P46940 1657 aa22.26■■□□□ 1.15
PPP1CA-201ENST00000312989 SLC52A1Q9NWF4 448 aa22.24■■□□□ 1.15
PPP1CA-201ENST00000312989 ZFYVE9O95405 1425 aa22.19■■□□□ 1.14
PPP1CA-201ENST00000312989 TXNDC2Q86VQ3 553 aa22.19■■□□□ 1.14
PPP1CA-201ENST00000312989 CPS1P31327 1500 aa22.19■■□□□ 1.14
PPP1CA-201ENST00000312989 TMEM131LA2VDJ0 1609 aa22.18■■□□□ 1.14
PPP1CA-201ENST00000312989 STRCP1A6NGW2 1772 aa22.17■■□□□ 1.14
PPP1CA-201ENST00000312989 STAG3Q9UJ98 1225 aa22.12■■□□□ 1.13
PPP1CA-201ENST00000312989 EID1Q9Y6B2 187 aa22.11■■□□□ 1.13
PPP1CA-201ENST00000312989 ALKQ9UM73 1620 aa22.1■■□□□ 1.13
PPP1CA-201ENST00000312989 LRRC7Q96NW7 1537 aa22.1■■□□□ 1.13
PPP1CA-201ENST00000312989 RIMS2Q9UQ26 1411 aa22.09■■□□□ 1.13
PPP1CA-201ENST00000312989 MYO5BQ9ULV0 1848 aa22.08■■□□□ 1.12
PPP1CA-201ENST00000312989 TRPM2O94759 1503 aa22.07■■□□□ 1.12
PPP1CA-201ENST00000312989 SPHKAPQ2M3C7 1700 aa22.07■■□□□ 1.12
PPP1CA-201ENST00000312989 PLEKHG1Q9ULL1 1385 aa22.06■■□□□ 1.12
PPP1CA-201ENST00000312989 CLTCL1P53675 1640 aa22.04■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms