RNA–Protein interactions for RNA: ENST00000312635.10

USP15-202, Transcript of ubiquitin specific peptidase 15, humanhuman

TSL 1 (best) BASIC

Gene USP15, Length 2,226 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP15-202ENST00000312635 DHX57Q6P158 1386 aaKnown RBP13.36□□□□□ -0.27
USP15-202ENST00000312635 CLSPNQ9HAW4 1339 aa13.36□□□□□ -0.27
USP15-202ENST00000312635 KIF3BO15066 747 aa13.35□□□□□ -0.27
USP15-202ENST00000312635 NUP155O75694 1391 aa13.34□□□□□ -0.27
USP15-202ENST00000312635 KANK1Q14678 1352 aa13.34□□□□□ -0.27
USP15-202ENST00000312635 DEPDC5O75140 1603 aa13.34□□□□□ -0.27
USP15-202ENST00000312635 RNF17Q9BXT8 1623 aaKnown RBP13.34□□□□□ -0.27
USP15-202ENST00000312635 CCER1Q8TC90 406 aaPredicted RBP13.33□□□□□ -0.27
USP15-202ENST00000312635 PRDM15P57071 1507 aaPredicted RBP13.32□□□□□ -0.28
USP15-202ENST00000312635 MPHOSPH9Q99550 1183 aa13.32□□□□□ -0.28
USP15-202ENST00000312635 PPP6R1Q9UPN7 881 aa13.32□□□□□ -0.28
USP15-202ENST00000312635 PZPP20742 1482 aa13.32□□□□□ -0.28
USP15-202ENST00000312635 FAM135AQ9P2D6 1515 aa13.31□□□□□ -0.28
USP15-202ENST00000312635 IQGAP3Q86VI3 1631 aa13.31□□□□□ -0.28
USP15-202ENST00000312635 VWDEQ8N2E2 1590 aa13.31□□□□□ -0.28
USP15-202ENST00000312635 SLC4A1APQ9BWU0 796 aaKnown RBP13.31□□□□□ -0.28
USP15-202ENST00000312635 MROH1Q8NDA8 1641 aa13.29□□□□□ -0.28
USP15-202ENST00000312635 LMTK2Q8IWU2 1503 aa13.29□□□□□ -0.28
USP15-202ENST00000312635 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.29□□□□□ -0.286e-7■■■■□ 22.5
USP15-202ENST00000312635 GGT6Q6P531 493 aa13.27□□□□□ -0.29
USP15-202ENST00000312635 PKD2Q13563 968 aa13.25□□□□□ -0.29
USP15-202ENST00000312635 ZC3H13Q5T200 1668 aaKnown RBP13.25□□□□□ -0.29
USP15-202ENST00000312635 ZEB1P37275 1124 aaPredicted RBP13.25□□□□□ -0.29
USP15-202ENST00000312635 TET3O43151 1660 aa13.25□□□□□ -0.29
USP15-202ENST00000312635 WASHC2CQ9Y4E1 1318 aa13.24□□□□□ -0.29
USP15-202ENST00000312635 ABCC3O15438 1527 aa13.23□□□□□ -0.29
USP15-202ENST00000312635 ARID4BQ4LE39 1312 aaPredicted RBP13.23□□□□□ -0.29
USP15-202ENST00000312635 RPRD2Q5VT52 1461 aaKnown RBP13.23□□□□□ -0.29
USP15-202ENST00000312635 ANKRD30BQ9BXX2 1392 aa13.22□□□□□ -0.29
USP15-202ENST00000312635 SIGLEC1Q9BZZ2 1709 aa13.22□□□□□ -0.29
USP15-202ENST00000312635 ARHGAP31Q2M1Z3 1444 aa13.22□□□□□ -0.29
USP15-202ENST00000312635 EFCAB6Q5THR3 1501 aa13.21□□□□□ -0.29
USP15-202ENST00000312635 CNTLNQ9NXG0 1405 aa13.21□□□□□ -0.3
USP15-202ENST00000312635 ESF1Q9H501 851 aaKnown RBP13.2□□□□□ -0.3
USP15-202ENST00000312635 TIMELESSQ9UNS1 1208 aa13.19□□□□□ -0.3
USP15-202ENST00000312635 CEP152O94986 1710 aa13.19□□□□□ -0.3
USP15-202ENST00000312635 CAMSAP1Q5T5Y3 1602 aa13.18□□□□□ -0.3
USP15-202ENST00000312635 PTPRTO14522 1441 aa13.18□□□□□ -0.3
USP15-202ENST00000312635 E9PCH4 1651 aa13.18□□□□□ -0.3
USP15-202ENST00000312635 MLECQ14165 292 aa13.17□□□□□ -0.3
USP15-202ENST00000312635 FOXD1Q16676 465 aa13.17□□□□□ -0.3
USP15-202ENST00000312635 NPATQ14207 1427 aa13.16□□□□□ -0.3
USP15-202ENST00000312635 TRPM2O94759 1503 aa13.15□□□□□ -0.3
USP15-202ENST00000312635 MROH2AA6NES4 1674 aa13.14□□□□□ -0.31
USP15-202ENST00000312635 PLA2R1Q13018 1463 aa13.14□□□□□ -0.31
USP15-202ENST00000312635 CLTCQ00610 1675 aaKnown RBP13.14□□□□□ -0.31
USP15-202ENST00000312635 CCDC144AA2RUR9 1427 aa13.14□□□□□ -0.31
USP15-202ENST00000312635 NOS1P29475 1434 aa13.14□□□□□ -0.31
USP15-202ENST00000312635 SIN3AQ96ST3 1273 aa13.13□□□□□ -0.31
USP15-202ENST00000312635 SPHKAPQ2M3C7 1700 aa13.13□□□□□ -0.31
USP15-202ENST00000312635 ZMYM3Q14202 1370 aa13.12□□□□□ -0.31
USP15-202ENST00000312635 NEUROD1Q13562 356 aa13.12□□□□□ -0.31
USP15-202ENST00000312635 ERVK-7P63135 1459 aa13.1□□□□□ -0.31
USP15-202ENST00000312635 ADAMTSL3P82987 1691 aa13.1□□□□□ -0.31
USP15-202ENST00000312635 TONSLQ96HA7 1378 aa13.1□□□□□ -0.31
USP15-202ENST00000312635 SPATA31D1Q6ZQQ2 1576 aa13.1□□□□□ -0.31
USP15-202ENST00000312635 SLC52A1Q9NWF4 448 aa13.09□□□□□ -0.31
USP15-202ENST00000312635 NEURL4Q96JN8 1562 aa13.09□□□□□ -0.31
USP15-202ENST00000312635 FER1L4A9Z1Z3 1794 aa13.09□□□□□ -0.31
USP15-202ENST00000312635 PREX1Q8TCU6 1659 aa13.08□□□□□ -0.32
USP15-202ENST00000312635 CLTCL1P53675 1640 aa13.06□□□□□ -0.32
USP15-202ENST00000312635 MADDQ8WXG6 1647 aa13.06□□□□□ -0.32
USP15-202ENST00000312635 SYNMO15061 1565 aa13.06□□□□□ -0.32
USP15-202ENST00000312635 STAC3Q96MF2 364 aa13.05□□□□□ -0.32
USP15-202ENST00000312635 PIK3C2BO00750 1634 aa13.05□□□□□ -0.32
USP15-202ENST00000312635 FBXO31Q5XUX0 539 aaPredicted RBP13.05□□□□□ -0.32
USP15-202ENST00000312635 SPATA31E1Q6ZUB1 1445 aa13.04□□□□□ -0.32
USP15-202ENST00000312635 TNRQ92752 1358 aa13.04□□□□□ -0.32
USP15-202ENST00000312635 C3P01024 1663 aa13.03□□□□□ -0.32
USP15-202ENST00000312635 PPP1R15AO75807 674 aaPredicted RBP13.03□□□□□ -0.32
USP15-202ENST00000312635 L3MBTL2Q969R5 705 aa13.03□□□□□ -0.32
USP15-202ENST00000312635 RIMS1Q86UR5 1692 aaKnown RBP13.02□□□□□ -0.32
USP15-202ENST00000312635 NLRP1Q9C000 1473 aa13.02□□□□□ -0.33
USP15-202ENST00000312635 ADGRB3O60242 1522 aa13.02□□□□□ -0.33
USP15-202ENST00000312635 IDI1Q13907 227 aa13.01□□□□□ -0.33
USP15-202ENST00000312635 RPGRIP1LQ68CZ1 1315 aa13.01□□□□□ -0.33
USP15-202ENST00000312635 UGGT1Q9NYU2 1555 aa13.01□□□□□ -0.33
USP15-202ENST00000312635 KIF1BO60333 1816 aa13.01□□□□□ -0.33
USP15-202ENST00000312635 CEBPAP49715 358 aaPredicted RBP12.99□□□□□ -0.33
USP15-202ENST00000312635 PTPRMP28827 1452 aa12.99□□□□□ -0.33
USP15-202ENST00000312635 KDM5AP29375 1690 aaKnown RBP12.98□□□□□ -0.33
USP15-202ENST00000312635 RGL3Q3MIN7 710 aa12.98□□□□□ -0.33
USP15-202ENST00000312635 UHRF1BP1Q6BDS2 1440 aa12.98□□□□□ -0.33
USP15-202ENST00000312635 CHGAP10645 457 aaKnown RBP12.97□□□□□ -0.33
USP15-202ENST00000312635 DCAF11Q8TEB1 546 aa12.97□□□□□ -0.33
USP15-202ENST00000312635 STAG3Q9UJ98 1225 aa12.97□□□□□ -0.33
USP15-202ENST00000312635 TMEM131LA2VDJ0 1609 aa12.97□□□□□ -0.33
USP15-202ENST00000312635 MYOM2P54296 1465 aa12.96□□□□□ -0.34
USP15-202ENST00000312635 CFAP65Q6ZU64 1925 aaKnown RBP12.96□□□□□ -0.34
USP15-202ENST00000312635 ZNF326Q5BKZ1 582 aaKnown RBP12.96□□□□□ -0.34
USP15-202ENST00000312635 A2ML1A8K2U0 1454 aa12.95□□□□□ -0.34
USP15-202ENST00000312635 HDGFP51858 240 aaKnown RBP12.94□□□□□ -0.34
USP15-202ENST00000312635 ZFYVE9O95405 1425 aa12.94□□□□□ -0.34
USP15-202ENST00000312635 MYO3AQ8NEV4 1616 aa12.93□□□□□ -0.34
USP15-202ENST00000312635 VGFO15240 615 aaPredicted RBP12.93□□□□□ -0.34
USP15-202ENST00000312635 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.93□□□□□ -0.34
USP15-202ENST00000312635 KDM4FA0A1W2PPD8 638 aa12.92□□□□□ -0.34
USP15-202ENST00000312635 KDM2AQ9Y2K7 1162 aa12.92□□□□□ -0.34
USP15-202ENST00000312635 PRAG1Q86YV5 1406 aa12.92□□□□□ -0.34
USP15-202ENST00000312635 IFT172Q9UG01 1749 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms