RNA–Protein interactions for RNA: ENST00000310260.7

VANGL1-201, Transcript of VANGL planar cell polarity protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VANGL1, Length 2,265 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VANGL1-201ENST00000310260 ANKRD50Q9ULJ7 1429 aa18.34■□□□□ 0.53
VANGL1-201ENST00000310260 TRIM52Q96A61 297 aa18.34■□□□□ 0.53
VANGL1-201ENST00000310260 NAIPQ13075 1403 aa18.33■□□□□ 0.53
VANGL1-201ENST00000310260 ADGBQ8N7X0 1667 aa18.32■□□□□ 0.52
VANGL1-201ENST00000310260 DUOX2Q9NRD8 1548 aa18.31■□□□□ 0.52
VANGL1-201ENST00000310260 HFM1A2PYH4 1435 aa18.3■□□□□ 0.52
VANGL1-201ENST00000310260 SETD5Q9C0A6 1442 aa18.3■□□□□ 0.52
VANGL1-201ENST00000310260 PLXNC1O60486 1568 aa18.3■□□□□ 0.52
VANGL1-201ENST00000310260 PLPPR3Q6T4P5 718 aa18.3■□□□□ 0.52
VANGL1-201ENST00000310260 CLSPNQ9HAW4 1339 aa18.29■□□□□ 0.52
VANGL1-201ENST00000310260 RAB3GAP2Q9H2M9 1393 aa18.28■□□□□ 0.52
VANGL1-201ENST00000310260 ESF1Q9H501 851 aaKnown RBP18.27■□□□□ 0.52
VANGL1-201ENST00000310260 SIGLEC1Q9BZZ2 1709 aa18.26■□□□□ 0.51
VANGL1-201ENST00000310260 ERBINQ96RT1 1412 aa18.25■□□□□ 0.51
VANGL1-201ENST00000310260 WASHC2CQ9Y4E1 1318 aa18.24■□□□□ 0.51
VANGL1-201ENST00000310260 SUPT16HQ9Y5B9 1047 aaKnown RBP18.24■□□□□ 0.51
VANGL1-201ENST00000310260 NUP155O75694 1391 aa18.24■□□□□ 0.51
VANGL1-201ENST00000310260 ANP32EQ9BTT0 268 aa18.2■□□□□ 0.5
VANGL1-201ENST00000310260 KANK1Q14678 1352 aa18.19■□□□□ 0.5
VANGL1-201ENST00000310260 GCC2Q8IWJ2 1684 aa18.19■□□□□ 0.5
VANGL1-201ENST00000310260 REREQ9P2R6 1566 aa18.18■□□□□ 0.5
VANGL1-201ENST00000310260 SLC4A1APQ9BWU0 796 aaKnown RBP18.18■□□□□ 0.5
VANGL1-201ENST00000310260 AGLP35573 1532 aa18.18■□□□□ 0.5
VANGL1-201ENST00000310260 BCL11AQ9H165 835 aa18.18■□□□□ 0.5
VANGL1-201ENST00000310260 CEBPAP49715 358 aaPredicted RBP18.16■□□□□ 0.5
VANGL1-201ENST00000310260 FOXD1Q16676 465 aa18.16■□□□□ 0.5
VANGL1-201ENST00000310260 TSHZ2Q9NRE2 1034 aa18.15■□□□□ 0.5
VANGL1-201ENST00000310260 MPHOSPH9Q99550 1183 aa18.14■□□□□ 0.49
VANGL1-201ENST00000310260 EIF2AK4Q9P2K8 1649 aaKnown RBP18.13■□□□□ 0.49
VANGL1-201ENST00000310260 KDM4FA0A1W2PPD8 638 aa18.13■□□□□ 0.49
VANGL1-201ENST00000310260 PKD2Q13563 968 aa18.12■□□□□ 0.49
VANGL1-201ENST00000310260 PPP6R1Q9UPN7 881 aa18.11■□□□□ 0.49
VANGL1-201ENST00000310260 BCORL1Q5H9F3 1711 aa18.1■□□□□ 0.49
VANGL1-201ENST00000310260 FBXO31Q5XUX0 539 aaPredicted RBP18.1■□□□□ 0.49
VANGL1-201ENST00000310260 MROH1Q8NDA8 1641 aa18.09■□□□□ 0.49
VANGL1-201ENST00000310260 RNF17Q9BXT8 1623 aaKnown RBP18.09■□□□□ 0.49
VANGL1-201ENST00000310260 ZMYM3Q14202 1370 aa18.08■□□□□ 0.49
VANGL1-201ENST00000310260 FAM135AQ9P2D6 1515 aa18.07■□□□□ 0.48
VANGL1-201ENST00000310260 MADDQ8WXG6 1647 aa18.07■□□□□ 0.48
VANGL1-201ENST00000310260 ABCC3O15438 1527 aa18.07■□□□□ 0.48
VANGL1-201ENST00000310260 PRDM15P57071 1507 aaPredicted RBP18.07■□□□□ 0.48
VANGL1-201ENST00000310260 UNC13BO14795 1591 aa18.07■□□□□ 0.48
VANGL1-201ENST00000310260 CLTCQ00610 1675 aaKnown RBP18.06■□□□□ 0.48
VANGL1-201ENST00000310260 DEPDC5O75140 1603 aa18.06■□□□□ 0.48
VANGL1-201ENST00000310260 KDM5DQ9BY66 1539 aa18.06■□□□□ 0.48
VANGL1-201ENST00000310260 PZPP20742 1482 aa18.06■□□□□ 0.48
VANGL1-201ENST00000310260 CEP152O94986 1710 aa18.05■□□□□ 0.48
VANGL1-201ENST00000310260 CFAP65Q6ZU64 1925 aaKnown RBP18.05■□□□□ 0.48
VANGL1-201ENST00000310260 FER1L4A9Z1Z3 1794 aa18.04■□□□□ 0.48
VANGL1-201ENST00000310260 RIMS1Q86UR5 1692 aaKnown RBP18.03■□□□□ 0.48
VANGL1-201ENST00000310260 CNTLNQ9NXG0 1405 aa18.03■□□□□ 0.48
VANGL1-201ENST00000310260 ADAMTSL3P82987 1691 aa18.02■□□□□ 0.48
VANGL1-201ENST00000310260 IQGAP3Q86VI3 1631 aa18.01■□□□□ 0.47
VANGL1-201ENST00000310260 VWDEQ8N2E2 1590 aa18.01■□□□□ 0.47
VANGL1-201ENST00000310260 NPATQ14207 1427 aa18■□□□□ 0.47
VANGL1-201ENST00000310260 PTPRMP28827 1452 aa17.99■□□□□ 0.47
VANGL1-201ENST00000310260 DHX57Q6P158 1386 aaKnown RBP17.98■□□□□ 0.47
VANGL1-201ENST00000310260 CAMSAP1Q5T5Y3 1602 aa17.98■□□□□ 0.47
VANGL1-201ENST00000310260 CHGAP10645 457 aaKnown RBP17.97■□□□□ 0.47
VANGL1-201ENST00000310260 LMTK2Q8IWU2 1503 aa17.96■□□□□ 0.47
VANGL1-201ENST00000310260 EFCAB6Q5THR3 1501 aa17.96■□□□□ 0.47
VANGL1-201ENST00000310260 TET3O43151 1660 aa17.96■□□□□ 0.47
VANGL1-201ENST00000310260 ZC3H13Q5T200 1668 aaKnown RBP17.95■□□□□ 0.46
VANGL1-201ENST00000310260 E9PCH4 1651 aa17.94■□□□□ 0.46
VANGL1-201ENST00000310260 SIN3AQ96ST3 1273 aa17.93■□□□□ 0.46
VANGL1-201ENST00000310260 STAG3Q9UJ98 1225 aa17.93■□□□□ 0.46
VANGL1-201ENST00000310260 C3P01024 1663 aa17.93■□□□□ 0.46
VANGL1-201ENST00000310260 ARHGAP31Q2M1Z3 1444 aa17.93■□□□□ 0.46
VANGL1-201ENST00000310260 TNRQ92752 1358 aa17.92■□□□□ 0.46
VANGL1-201ENST00000310260 IDI1Q13907 227 aa17.92■□□□□ 0.46
VANGL1-201ENST00000310260 AEBP2Q6ZN18 517 aaPredicted RBP17.92■□□□□ 0.46
VANGL1-201ENST00000310260 ERVK-7P63135 1459 aa17.91■□□□□ 0.46
VANGL1-201ENST00000310260 MROH2AA6NES4 1674 aa17.9■□□□□ 0.46
VANGL1-201ENST00000310260 RPRD2Q5VT52 1461 aaKnown RBP17.9■□□□□ 0.46
VANGL1-201ENST00000310260 RGL3Q3MIN7 710 aa17.89■□□□□ 0.46
VANGL1-201ENST00000310260 ANKRD30BQ9BXX2 1392 aa17.89■□□□□ 0.45
VANGL1-201ENST00000310260 PLA2R1Q13018 1463 aa17.89■□□□□ 0.45
VANGL1-201ENST00000310260 UGGT1Q9NYU2 1555 aa17.88■□□□□ 0.45
VANGL1-201ENST00000310260 SENP3Q9H4L4 574 aaPredicted RBP17.88■□□□□ 0.45
VANGL1-201ENST00000310260 SLC52A1Q9NWF4 448 aa17.87■□□□□ 0.45
VANGL1-201ENST00000310260 NOS1P29475 1434 aa17.87■□□□□ 0.45
VANGL1-201ENST00000310260 PREX1Q8TCU6 1659 aa17.86■□□□□ 0.45
VANGL1-201ENST00000310260 CCDC144AA2RUR9 1427 aa17.86■□□□□ 0.45
VANGL1-201ENST00000310260 ZNF326Q5BKZ1 582 aaKnown RBP17.86■□□□□ 0.45
VANGL1-201ENST00000310260 PTPRTO14522 1441 aa17.85■□□□□ 0.45
VANGL1-201ENST00000310260 NUTM2DQ5VT03 806 aaPredicted RBP17.84■□□□□ 0.45
VANGL1-201ENST00000310260 SYNMO15061 1565 aa17.83■□□□□ 0.45
VANGL1-201ENST00000310260 SPATA31D1Q6ZQQ2 1576 aa17.83■□□□□ 0.44
VANGL1-201ENST00000310260 HSPA2P54652 639 aa17.83■□□□□ 0.44
VANGL1-201ENST00000310260 SPHKAPQ2M3C7 1700 aa17.82■□□□□ 0.44
VANGL1-201ENST00000310260 UHRF1BP1Q6BDS2 1440 aa17.8■□□□□ 0.44
VANGL1-201ENST00000310260 TRPM2O94759 1503 aa17.8■□□□□ 0.44
VANGL1-201ENST00000310260 KDM2AQ9Y2K7 1162 aa17.79■□□□□ 0.44
VANGL1-201ENST00000310260 SETD1BQ9UPS6 1966 aaKnown RBP17.79■□□□□ 0.44
VANGL1-201ENST00000310260 CLTCL1P53675 1640 aa17.78■□□□□ 0.44
VANGL1-201ENST00000310260 THEMISQ8N1K5 641 aaPredicted RBP17.78■□□□□ 0.44
VANGL1-201ENST00000310260 NLRP1Q9C000 1473 aa17.76■□□□□ 0.43
VANGL1-201ENST00000310260 DCAF11Q8TEB1 546 aa17.75■□□□□ 0.43
VANGL1-201ENST00000310260 BCANQ96GW7 911 aa17.75■□□□□ 0.43
VANGL1-201ENST00000310260 PIK3C2BO00750 1634 aa17.75■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms