RNA–Protein interactions for RNA: ENST00000303904.7

COPS6-201, Transcript of COP9 signalosome subunit 6, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COPS6, Length 1,432 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS6-201ENST00000303904 FAM135AQ9P2D6 1515 aa43.57■■■■■ 4.56
COPS6-201ENST00000303904 ITGAEP38570 1179 aa43.54■■■■■ 4.56
COPS6-201ENST00000303904 MROH2AA6NES4 1674 aa43.53■■■■■ 4.56
COPS6-201ENST00000303904 ROCK1Q13464 1354 aa43.51■■■■■ 4.56
COPS6-201ENST00000303904 WASHC2CQ9Y4E1 1318 aa43.51■■■■■ 4.55
COPS6-201ENST00000303904 RNF17Q9BXT8 1623 aaKnown RBP43.5■■■■■ 4.55
COPS6-201ENST00000303904 CEBPAP49715 358 aaPredicted RBP43.49■■■■■ 4.55
COPS6-201ENST00000303904 ZMYM3Q14202 1370 aa43.49■■■■■ 4.55
COPS6-201ENST00000303904 CLTCQ00610 1675 aaKnown RBP43.49■■■■■ 4.55
COPS6-201ENST00000303904 KDM5DQ9BY66 1539 aa43.48■■■■■ 4.55
COPS6-201ENST00000303904 PTPRKQ15262 1439 aa43.47■■■■■ 4.55
COPS6-201ENST00000303904 C3P01024 1663 aa43.46■■■■■ 4.55
COPS6-201ENST00000303904 ANKRD50Q9ULJ7 1429 aa43.41■■■■■ 4.54
COPS6-201ENST00000303904 KANK1Q14678 1352 aa43.37■■■■■ 4.53
COPS6-201ENST00000303904 NPATQ14207 1427 aa43.36■■■■■ 4.53
COPS6-201ENST00000303904 ZC3H13Q5T200 1668 aaKnown RBP43.36■■■■■ 4.53
COPS6-201ENST00000303904 SETD1BQ9UPS6 1966 aaKnown RBP43.34■■■■■ 4.53
COPS6-201ENST00000303904 PRDM15P57071 1507 aaPredicted RBP43.33■■■■■ 4.53
COPS6-201ENST00000303904 GRWD1Q9BQ67 446 aaKnown RBP eCLIP43.31■■■■■ 4.521e-6■■■□□ 15.9
COPS6-201ENST00000303904 MROH1Q8NDA8 1641 aa43.3■■■■■ 4.52
COPS6-201ENST00000303904 DEPDC5O75140 1603 aa43.29■■■■■ 4.52
COPS6-201ENST00000303904 UHRF1BP1Q6BDS2 1440 aa43.29■■■■■ 4.52
COPS6-201ENST00000303904 ABCC3O15438 1527 aa43.28■■■■■ 4.52
COPS6-201ENST00000303904 PREX1Q8TCU6 1659 aa43.28■■■■■ 4.52
COPS6-201ENST00000303904 LMTK3Q96Q04 1460 aa43.26■■■■■ 4.52
COPS6-201ENST00000303904 PZPP20742 1482 aa43.23■■■■■ 4.51
COPS6-201ENST00000303904 CEP152O94986 1710 aa43.16■■■■■ 4.5
COPS6-201ENST00000303904 CAMSAP1Q5T5Y3 1602 aa43.13■■■■■ 4.5
COPS6-201ENST00000303904 LMTK2Q8IWU2 1503 aa43.1■■■■■ 4.49
COPS6-201ENST00000303904 VWDEQ8N2E2 1590 aa43.1■■■■■ 4.49
COPS6-201ENST00000303904 ARHGAP31Q2M1Z3 1444 aa43.09■■■■■ 4.49
COPS6-201ENST00000303904 TNRQ92752 1358 aa43.08■■■■■ 4.49
COPS6-201ENST00000303904 FBXO31Q5XUX0 539 aaPredicted RBP43.08■■■■■ 4.49
COPS6-201ENST00000303904 UNC13BO14795 1591 aa43.07■■■■■ 4.48
COPS6-201ENST00000303904 HFM1A2PYH4 1435 aa43.06■■■■■ 4.48
COPS6-201ENST00000303904 NAIPQ13075 1403 aa43.05■■■■■ 4.48
COPS6-201ENST00000303904 HSPA2P54652 639 aa43.05■■■■■ 4.48
COPS6-201ENST00000303904 MYO3AQ8NEV4 1616 aa43.03■■■■■ 4.48
COPS6-201ENST00000303904 GCC2Q8IWJ2 1684 aa43.02■■■■■ 4.48
COPS6-201ENST00000303904 ERVK-7P63135 1459 aa42.99■■■■■ 4.47
COPS6-201ENST00000303904 SPATA31D1Q6ZQQ2 1576 aa42.98■■■■■ 4.47
COPS6-201ENST00000303904 NUP155O75694 1391 aa42.98■■■■■ 4.47
COPS6-201ENST00000303904 EFCAB6Q5THR3 1501 aa42.96■■■■■ 4.47
COPS6-201ENST00000303904 NLRP1Q9C000 1473 aa42.96■■■■■ 4.47
COPS6-201ENST00000303904 CEP170BQ9Y4F5 1589 aaPredicted RBP42.95■■■■■ 4.47
COPS6-201ENST00000303904 ZNF142P52746 1687 aaPredicted RBP42.94■■■■■ 4.46
COPS6-201ENST00000303904 A2ML1A8K2U0 1454 aa42.92■■■■■ 4.46
COPS6-201ENST00000303904 RPRD2Q5VT52 1461 aaKnown RBP42.92■■■■■ 4.46
COPS6-201ENST00000303904 TET3O43151 1660 aa42.91■■■■■ 4.46
COPS6-201ENST00000303904 IQGAP3Q86VI3 1631 aa42.91■■■■■ 4.46
COPS6-201ENST00000303904 CFAP65Q6ZU64 1925 aaKnown RBP42.86■■■■■ 4.45
COPS6-201ENST00000303904 ACIN1Q9UKV3 1341 aaKnown RBP42.82■■■■■ 4.45
COPS6-201ENST00000303904 DMRT2Q9Y5R5 561 aa42.8■■■■■ 4.44
COPS6-201ENST00000303904 THEMISQ8N1K5 641 aaPredicted RBP42.8■■■■■ 4.44
COPS6-201ENST00000303904 TRIM52Q96A61 297 aa42.8■■■■■ 4.44
COPS6-201ENST00000303904 UGGT1Q9NYU2 1555 aa42.78■■■■■ 4.44
COPS6-201ENST00000303904 PLA2R1Q13018 1463 aa42.75■■■■■ 4.43
COPS6-201ENST00000303904 NOS1P29475 1434 aa42.75■■■■■ 4.43
COPS6-201ENST00000303904 SLC52A1Q9NWF4 448 aa42.72■■■■■ 4.43
COPS6-201ENST00000303904 SETD5Q9C0A6 1442 aa42.7■■■■■ 4.43
COPS6-201ENST00000303904 PKD2Q13563 968 aa42.7■■■■■ 4.43
COPS6-201ENST00000303904 STAG3Q9UJ98 1225 aa42.69■■■■■ 4.42
COPS6-201ENST00000303904 E9PCH4 1651 aa42.68■■■■■ 4.42
COPS6-201ENST00000303904 STRCQ7RTU9 1775 aa42.64■■■■■ 4.42
COPS6-201ENST00000303904 SYNMO15061 1565 aa42.64■■■■■ 4.42
COPS6-201ENST00000303904 IDI1Q13907 227 aa42.62■■■■■ 4.41
COPS6-201ENST00000303904 SLC4A1APQ9BWU0 796 aaKnown RBP42.62■■■■■ 4.41
COPS6-201ENST00000303904 ANKLE2Q86XL3 938 aa42.6■■■■■ 4.41
COPS6-201ENST00000303904 PTPRTO14522 1441 aa42.58■■■■■ 4.41
COPS6-201ENST00000303904 UBR1Q8IWV7 1749 aa42.57■■■■■ 4.41
COPS6-201ENST00000303904 NCKAP5LQ9HCH0 1330 aa42.57■■■■■ 4.4
COPS6-201ENST00000303904 PIK3C2BO00750 1634 aa42.56■■■■■ 4.4
COPS6-201ENST00000303904 KDM5AP29375 1690 aaKnown RBP42.55■■■■■ 4.4
COPS6-201ENST00000303904 RAB3GAP2Q9H2M9 1393 aa42.52■■■■■ 4.4
COPS6-201ENST00000303904 ADGRB3O60242 1522 aa42.48■■■■■ 4.39
COPS6-201ENST00000303904 POLR1AO95602 1720 aaPredicted RBP42.48■■■■■ 4.39
COPS6-201ENST00000303904 EID1Q9Y6B2 187 aa42.47■■■■■ 4.39
COPS6-201ENST00000303904 SPHKAPQ2M3C7 1700 aa42.46■■■■■ 4.39
COPS6-201ENST00000303904 SLIT1O75093 1534 aa42.44■■■■■ 4.38
COPS6-201ENST00000303904 HRCP23327 699 aa42.44■■■■■ 4.38
COPS6-201ENST00000303904 TMEM2Q9UHN6 1383 aa42.43■■■■■ 4.38
COPS6-201ENST00000303904 MPHOSPH9Q99550 1183 aa42.43■■■■■ 4.38
COPS6-201ENST00000303904 CHGAP10645 457 aaKnown RBP42.41■■■■■ 4.38
COPS6-201ENST00000303904 ARHGAP23Q9P227 1491 aa42.41■■■■■ 4.38
COPS6-201ENST00000303904 HDGFP51858 240 aaKnown RBP42.38■■■■■ 4.38
COPS6-201ENST00000303904 TXNDC2Q86VQ3 553 aa42.38■■■■■ 4.38
COPS6-201ENST00000303904 SCAF11Q99590 1463 aaKnown RBP42.38■■■■■ 4.38
COPS6-201ENST00000303904 TRPM2O94759 1503 aa42.38■■■■■ 4.37
COPS6-201ENST00000303904 MED14O60244 1454 aa42.37■■■■■ 4.37
COPS6-201ENST00000303904 NPHP4O75161 1426 aaPredicted RBP42.35■■■■■ 4.37
COPS6-201ENST00000303904 NEURL4Q96JN8 1562 aa42.34■■■■■ 4.37
COPS6-201ENST00000303904 TMEM131LA2VDJ0 1609 aa42.33■■■■■ 4.37
COPS6-201ENST00000303904 LTKP29376 864 aa42.28■■■■■ 4.36
COPS6-201ENST00000303904 ABCF1Q8NE71 845 aaKnown RBP eCLIP42.26■■■■■ 4.36
COPS6-201ENST00000303904 IQGAP1P46940 1657 aa42.25■■■■■ 4.35
COPS6-201ENST00000303904 TRIM26Q12899 539 aaPredicted RBP42.25■■■■■ 4.35
COPS6-201ENST00000303904 PPP1R15AO75807 674 aaPredicted RBP42.23■■■■■ 4.35
COPS6-201ENST00000303904 FOXD1Q16676 465 aa42.23■■■■■ 4.35
COPS6-201ENST00000303904 CLTCL1P53675 1640 aa42.22■■■■■ 4.35
COPS6-201ENST00000303904 RIMS2Q9UQ26 1411 aa42.21■■■■■ 4.35
Retrieved 100 of 20,778 RNA–protein pairs in 9.3 ms