RNA–Protein interactions for RNA: ENST00000302708.8

ALKBH3-201, Transcript of alkB homolog 3, alpha-ketoglutaratedependent dioxygenase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ALKBH3, Length 1,474 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALKBH3-201ENST00000302708 PKD2Q13563 968 aa26.91■■□□□ 1.9
ALKBH3-201ENST00000302708 MBD5Q9P267 1494 aa26.91■■□□□ 1.9
ALKBH3-201ENST00000302708 DNMT1P26358 1616 aaKnown RBP26.88■■□□□ 1.89
ALKBH3-201ENST00000302708 EHBP1L1Q8N3D4 1523 aa26.87■■□□□ 1.89
ALKBH3-201ENST00000302708 PPP6R1Q9UPN7 881 aa26.86■■□□□ 1.89
ALKBH3-201ENST00000302708 A2ML1A8K2U0 1454 aa26.85■■□□□ 1.89
ALKBH3-201ENST00000302708 FBXO31Q5XUX0 539 aaPredicted RBP26.82■■□□□ 1.88
ALKBH3-201ENST00000302708 POLR1AO95602 1720 aaPredicted RBP26.82■■□□□ 1.88
ALKBH3-201ENST00000302708 DHX29Q7Z478 1369 aaKnown RBP26.81■■□□□ 1.88
ALKBH3-201ENST00000302708 RTEL1-TNFRSF6BF6WH68 1400 aa26.81■■□□□ 1.88
ALKBH3-201ENST00000302708 NEURL4Q96JN8 1562 aa26.8■■□□□ 1.88
ALKBH3-201ENST00000302708 KIF3BO15066 747 aa26.78■■□□□ 1.88
ALKBH3-201ENST00000302708 TNRQ92752 1358 aa26.77■■□□□ 1.88
ALKBH3-201ENST00000302708 CAMSAP2Q08AD1 1489 aa26.76■■□□□ 1.87
ALKBH3-201ENST00000302708 KDM5DQ9BY66 1539 aa26.75■■□□□ 1.87
ALKBH3-201ENST00000302708 KANK4Q5T7N3 995 aaPredicted RBP26.75■■□□□ 1.87
ALKBH3-201ENST00000302708 CCDC141Q6ZP82 1450 aa26.75■■□□□ 1.87
ALKBH3-201ENST00000302708 PZPP20742 1482 aa26.73■■□□□ 1.87
ALKBH3-201ENST00000302708 SCAF1Q9H7N4 1312 aaKnown RBP26.73■■□□□ 1.87
ALKBH3-201ENST00000302708 NCOA2Q15596 1464 aa26.73■■□□□ 1.87
ALKBH3-201ENST00000302708 PIP4K2BP78356 416 aa26.71■■□□□ 1.87
ALKBH3-201ENST00000302708 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP26.7■■□□□ 1.86
ALKBH3-201ENST00000302708 HSPA1LP34931 641 aa26.69■■□□□ 1.86
ALKBH3-201ENST00000302708 SHANK2Q9UPX8 1470 aa26.69■■□□□ 1.86
ALKBH3-201ENST00000302708 WASHC2CQ9Y4E1 1318 aa26.68■■□□□ 1.86
ALKBH3-201ENST00000302708 RRBP1Q9P2E9 1410 aaKnown RBP26.68■■□□□ 1.86
ALKBH3-201ENST00000302708 CPS1P31327 1500 aa26.67■■□□□ 1.86
ALKBH3-201ENST00000302708 VWDEQ8N2E2 1590 aa26.65■■□□□ 1.86
ALKBH3-201ENST00000302708 FAM135AQ9P2D6 1515 aa26.65■■□□□ 1.86
ALKBH3-201ENST00000302708 MED1Q15648 1581 aaPredicted RBP26.64■■□□□ 1.86
ALKBH3-201ENST00000302708 UGGT1Q9NYU2 1555 aa26.63■■□□□ 1.85
ALKBH3-201ENST00000302708 LRRC9Q6ZRR7 1453 aa26.63■■□□□ 1.85
ALKBH3-201ENST00000302708 MIA2Q96PC5 1412 aa26.63■■□□□ 1.85
ALKBH3-201ENST00000302708 ARHGEF5Q12774 1597 aa26.62■■□□□ 1.85
ALKBH3-201ENST00000302708 ANKLE2Q86XL3 938 aa26.62■■□□□ 1.85
ALKBH3-201ENST00000302708 CCER1Q8TC90 406 aaPredicted RBP26.61■■□□□ 1.85
ALKBH3-201ENST00000302708 NLRP1Q9C000 1473 aa26.6■■□□□ 1.85
ALKBH3-201ENST00000302708 ALKQ9UM73 1620 aa26.6■■□□□ 1.85
ALKBH3-201ENST00000302708 TOM1O60784 492 aa26.6■■□□□ 1.85
ALKBH3-201ENST00000302708 NPHP4O75161 1426 aaPredicted RBP26.59■■□□□ 1.85
ALKBH3-201ENST00000302708 STRCP1A6NGW2 1772 aa26.58■■□□□ 1.85
ALKBH3-201ENST00000302708 THEMISQ8N1K5 641 aaPredicted RBP26.58■■□□□ 1.85
ALKBH3-201ENST00000302708 DEPDC5O75140 1603 aa26.58■■□□□ 1.85
ALKBH3-201ENST00000302708 IQGAP1P46940 1657 aa26.58■■□□□ 1.84
ALKBH3-201ENST00000302708 RSPH4AQ5TD94 716 aa26.57■■□□□ 1.84
ALKBH3-201ENST00000302708 RNF17Q9BXT8 1623 aaKnown RBP26.57■■□□□ 1.84
ALKBH3-201ENST00000302708 MED14O60244 1454 aa26.56■■□□□ 1.84
ALKBH3-201ENST00000302708 ABCC3O15438 1527 aa26.56■■□□□ 1.84
ALKBH3-201ENST00000302708 CFAP65Q6ZU64 1925 aaKnown RBP26.55■■□□□ 1.84
ALKBH3-201ENST00000302708 TSPY4P0CV99 314 aa26.54■■□□□ 1.84
ALKBH3-201ENST00000302708 TSPY10P0CW01 314 aa26.54■■□□□ 1.84
ALKBH3-201ENST00000302708 SENP3Q9H4L4 574 aaPredicted RBP26.53■■□□□ 1.84
ALKBH3-201ENST00000302708 ZC3H13Q5T200 1668 aaKnown RBP26.52■■□□□ 1.84
ALKBH3-201ENST00000302708 CEP152O94986 1710 aa26.51■■□□□ 1.84
ALKBH3-201ENST00000302708 MROH1Q8NDA8 1641 aa26.51■■□□□ 1.83
ALKBH3-201ENST00000302708 MAST1Q9Y2H9 1570 aa26.49■■□□□ 1.83
ALKBH3-201ENST00000302708 ERVK-7P63135 1459 aa26.49■■□□□ 1.83
ALKBH3-201ENST00000302708 LRRC7Q96NW7 1537 aa26.47■■□□□ 1.83
ALKBH3-201ENST00000302708 EIF2AK4Q9P2K8 1649 aaKnown RBP26.46■■□□□ 1.83
ALKBH3-201ENST00000302708 UBR1Q8IWV7 1749 aa26.45■■□□□ 1.82
ALKBH3-201ENST00000302708 SYNMO15061 1565 aa26.42■■□□□ 1.82
ALKBH3-201ENST00000302708 PHF23Q9BUL5 403 aaPredicted RBP26.39■■□□□ 1.82
ALKBH3-201ENST00000302708 SCAF11Q99590 1463 aaKnown RBP26.36■■□□□ 1.81
ALKBH3-201ENST00000302708 MYOM3Q5VTT5 1437 aa26.36■■□□□ 1.81
ALKBH3-201ENST00000302708 XIRP1Q702N8 1843 aaKnown RBP26.35■■□□□ 1.81
ALKBH3-201ENST00000302708 DUOX2Q9NRD8 1548 aa26.35■■□□□ 1.81
ALKBH3-201ENST00000302708 LTKP29376 864 aa26.35■■□□□ 1.81
ALKBH3-201ENST00000302708 PRDM15P57071 1507 aaPredicted RBP26.31■■□□□ 1.8
ALKBH3-201ENST00000302708 ARHGAP23Q9P227 1491 aa26.31■■□□□ 1.8
ALKBH3-201ENST00000302708 SLIT1O75093 1534 aa26.31■■□□□ 1.8
ALKBH3-201ENST00000302708 CROCC2H7BZ55 1655 aa26.31■■□□□ 1.8
ALKBH3-201ENST00000302708 TXNDC2Q86VQ3 553 aa26.3■■□□□ 1.8
ALKBH3-201ENST00000302708 KIF15Q9NS87 1388 aa26.29■■□□□ 1.8
ALKBH3-201ENST00000302708 PIK3C2BO00750 1634 aa26.29■■□□□ 1.8
ALKBH3-201ENST00000302708 CLSPNQ9HAW4 1339 aa26.28■■□□□ 1.8
ALKBH3-201ENST00000302708 RRP7BPQ9NSQ0 103 aa26.27■■□□□ 1.8
ALKBH3-201ENST00000302708 GRWD1Q9BQ67 446 aaKnown RBP eCLIP26.26■■□□□ 1.79
ALKBH3-201ENST00000302708 ABCC5O15440 1437 aa26.26■■□□□ 1.79
ALKBH3-201ENST00000302708 ARHGAP31Q2M1Z3 1444 aa26.25■■□□□ 1.79
ALKBH3-201ENST00000302708 ERBINQ96RT1 1412 aa26.23■■□□□ 1.79
ALKBH3-201ENST00000302708 PTPN23Q9H3S7 1636 aa26.23■■□□□ 1.79
ALKBH3-201ENST00000302708 RGS17Q9UGC6 210 aaPredicted RBP26.2■■□□□ 1.78
ALKBH3-201ENST00000302708 TMEM2Q9UHN6 1383 aa26.19■■□□□ 1.78
ALKBH3-201ENST00000302708 EID1Q9Y6B2 187 aa26.19■■□□□ 1.78
ALKBH3-201ENST00000302708 FGD6Q6ZV73 1430 aa26.19■■□□□ 1.78
ALKBH3-201ENST00000302708 DHX57Q6P158 1386 aaKnown RBP26.18■■□□□ 1.78
ALKBH3-201ENST00000302708 DAPK1P53355 1430 aa26.17■■□□□ 1.78
ALKBH3-201ENST00000302708 RBM33Q96EV2 1170 aaKnown RBP26.16■■□□□ 1.78
ALKBH3-201ENST00000302708 STAG3Q9UJ98 1225 aa26.16■■□□□ 1.78
ALKBH3-201ENST00000302708 EFCAB6Q5THR3 1501 aa26.15■■□□□ 1.78
ALKBH3-201ENST00000302708 TMEM94Q12767 1356 aa26.14■■□□□ 1.77
ALKBH3-201ENST00000302708 IDI1Q13907 227 aa26.13■■□□□ 1.77
ALKBH3-201ENST00000302708 CHIC2Q9UKJ5 165 aa26.13■■□□□ 1.77
ALKBH3-201ENST00000302708 KDM5AP29375 1690 aaKnown RBP26.12■■□□□ 1.77
ALKBH3-201ENST00000302708 KANK1Q14678 1352 aa26.11■■□□□ 1.77
ALKBH3-201ENST00000302708 SLC26A8Q96RN1 970 aa26.11■■□□□ 1.77
ALKBH3-201ENST00000302708 SETD5Q9C0A6 1442 aa26.1■■□□□ 1.77
ALKBH3-201ENST00000302708 ROBO1Q9Y6N7 1651 aa26.1■■□□□ 1.77
ALKBH3-201ENST00000302708 TET3O43151 1660 aa26.1■■□□□ 1.77
ALKBH3-201ENST00000302708 FAM135BQ49AJ0 1406 aa26.1■■□□□ 1.77
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms