RNA–Protein interactions for RNA: ENST00000302273.2

VPREB1-201, Transcript of V-set pre-B cell surrogate light chain 1, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene VPREB1, Length 626 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPREB1-201ENST00000302273 NAIPQ13075 1403 aa13.24□□□□□ -0.29
VPREB1-201ENST00000302273 BCORL1Q5H9F3 1711 aa13.24□□□□□ -0.29
VPREB1-201ENST00000302273 KANK1Q14678 1352 aa13.23□□□□□ -0.29
VPREB1-201ENST00000302273 GGT6Q6P531 493 aa13.23□□□□□ -0.29
VPREB1-201ENST00000302273 WASHC2CQ9Y4E1 1318 aa13.21□□□□□ -0.29
VPREB1-201ENST00000302273 SETD5Q9C0A6 1442 aa13.2□□□□□ -0.3
VPREB1-201ENST00000302273 KDM5DQ9BY66 1539 aa13.18□□□□□ -0.3
VPREB1-201ENST00000302273 MLECQ14165 292 aa13.18□□□□□ -0.3
VPREB1-201ENST00000302273 RNF17Q9BXT8 1623 aaKnown RBP13.17□□□□□ -0.3
VPREB1-201ENST00000302273 ARHGAP31Q2M1Z3 1444 aa13.16□□□□□ -0.3
VPREB1-201ENST00000302273 PRDM15P57071 1507 aaPredicted RBP13.16□□□□□ -0.3
VPREB1-201ENST00000302273 LMTK2Q8IWU2 1503 aa13.16□□□□□ -0.3
VPREB1-201ENST00000302273 ZMYM3Q14202 1370 aa13.16□□□□□ -0.3
VPREB1-201ENST00000302273 ADAMTSL3P82987 1691 aa13.15□□□□□ -0.3
VPREB1-201ENST00000302273 NUP155O75694 1391 aa13.15□□□□□ -0.3
VPREB1-201ENST00000302273 DEPDC5O75140 1603 aa13.14□□□□□ -0.31
VPREB1-201ENST00000302273 VWDEQ8N2E2 1590 aa13.13□□□□□ -0.31
VPREB1-201ENST00000302273 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.13□□□□□ -0.31
VPREB1-201ENST00000302273 NPATQ14207 1427 aa13.13□□□□□ -0.31
VPREB1-201ENST00000302273 GCC2Q8IWJ2 1684 aa13.12□□□□□ -0.31
VPREB1-201ENST00000302273 RPRD2Q5VT52 1461 aaKnown RBP13.12□□□□□ -0.31
VPREB1-201ENST00000302273 RAB3GAP2Q9H2M9 1393 aa13.12□□□□□ -0.31
VPREB1-201ENST00000302273 SIGLEC1Q9BZZ2 1709 aa13.12□□□□□ -0.31
VPREB1-201ENST00000302273 PTPRMP28827 1452 aa13.11□□□□□ -0.31
VPREB1-201ENST00000302273 ZC3H13Q5T200 1668 aaKnown RBP13.11□□□□□ -0.31
VPREB1-201ENST00000302273 UNC13BO14795 1591 aa13.11□□□□□ -0.31
VPREB1-201ENST00000302273 ABCC3O15438 1527 aa13.1□□□□□ -0.31
VPREB1-201ENST00000302273 TRIM52Q96A61 297 aa13.1□□□□□ -0.31
VPREB1-201ENST00000302273 PZPP20742 1482 aa13.1□□□□□ -0.31
VPREB1-201ENST00000302273 MROH1Q8NDA8 1641 aa13.1□□□□□ -0.31
VPREB1-201ENST00000302273 SLC4A1APQ9BWU0 796 aaKnown RBP13.09□□□□□ -0.31
VPREB1-201ENST00000302273 MROH2AA6NES4 1674 aa13.08□□□□□ -0.31
VPREB1-201ENST00000302273 MPHOSPH9Q99550 1183 aa13.08□□□□□ -0.32
VPREB1-201ENST00000302273 SLC52A1Q9NWF4 448 aa13.08□□□□□ -0.32
VPREB1-201ENST00000302273 MADDQ8WXG6 1647 aa13.06□□□□□ -0.32
VPREB1-201ENST00000302273 IQGAP3Q86VI3 1631 aa13.06□□□□□ -0.32
VPREB1-201ENST00000302273 CEBPAP49715 358 aaPredicted RBP13.04□□□□□ -0.32
VPREB1-201ENST00000302273 PCGF6Q9BYE7 350 aa13.04□□□□□ -0.32
VPREB1-201ENST00000302273 FER1L4A9Z1Z3 1794 aa13.04□□□□□ -0.32
VPREB1-201ENST00000302273 NOS1P29475 1434 aa13.04□□□□□ -0.32
VPREB1-201ENST00000302273 EFCAB6Q5THR3 1501 aa13.03□□□□□ -0.32
VPREB1-201ENST00000302273 PKD2Q13563 968 aa13.03□□□□□ -0.32
VPREB1-201ENST00000302273 TET3O43151 1660 aa13.02□□□□□ -0.32
VPREB1-201ENST00000302273 TNRQ92752 1358 aa13.02□□□□□ -0.33
VPREB1-201ENST00000302273 PTPRTO14522 1441 aa13.02□□□□□ -0.33
VPREB1-201ENST00000302273 NLRP1Q9C000 1473 aa13.02□□□□□ -0.33
VPREB1-201ENST00000302273 FBXO31Q5XUX0 539 aaPredicted RBP13.01□□□□□ -0.33
VPREB1-201ENST00000302273 SPATA31D1Q6ZQQ2 1576 aa13.01□□□□□ -0.33
VPREB1-201ENST00000302273 CLTCQ00610 1675 aaKnown RBP13.01□□□□□ -0.33
VPREB1-201ENST00000302273 ERVK-7P63135 1459 aa13□□□□□ -0.33
VPREB1-201ENST00000302273 RIMS1Q86UR5 1692 aaKnown RBP12.99□□□□□ -0.33
VPREB1-201ENST00000302273 CAMSAP1Q5T5Y3 1602 aa12.99□□□□□ -0.33
VPREB1-201ENST00000302273 SETD1BQ9UPS6 1966 aaKnown RBP12.99□□□□□ -0.33
VPREB1-201ENST00000302273 UHRF1BP1Q6BDS2 1440 aa12.98□□□□□ -0.33
VPREB1-201ENST00000302273 THEMISQ8N1K5 641 aaPredicted RBP12.98□□□□□ -0.33
VPREB1-201ENST00000302273 C3P01024 1663 aa12.98□□□□□ -0.33
VPREB1-201ENST00000302273 HDGFP51858 240 aaKnown RBP12.97□□□□□ -0.33
VPREB1-201ENST00000302273 IDI1Q13907 227 aa12.97□□□□□ -0.33
VPREB1-201ENST00000302273 CLSPNQ9HAW4 1339 aa12.96□□□□□ -0.33
VPREB1-201ENST00000302273 PLPPR3Q6T4P5 718 aa12.96□□□□□ -0.33
VPREB1-201ENST00000302273 FBXO41Q8TF61 875 aa12.95□□□□□ -0.34
VPREB1-201ENST00000302273 STAC3Q96MF2 364 aa12.95□□□□□ -0.34
VPREB1-201ENST00000302273 A2ML1A8K2U0 1454 aa12.95□□□□□ -0.34
VPREB1-201ENST00000302273 ANKRD30BQ9BXX2 1392 aa12.94□□□□□ -0.34
VPREB1-201ENST00000302273 CEP152O94986 1710 aa12.93□□□□□ -0.34
VPREB1-201ENST00000302273 LMTK3Q96Q04 1460 aa12.93□□□□□ -0.34
VPREB1-201ENST00000302273 HSPA2P54652 639 aa12.93□□□□□ -0.34
VPREB1-201ENST00000302273 STAG3Q9UJ98 1225 aa12.93□□□□□ -0.34
VPREB1-201ENST00000302273 CCDC144AA2RUR9 1427 aa12.93□□□□□ -0.34
VPREB1-201ENST00000302273 TRPM2O94759 1503 aa12.93□□□□□ -0.34
VPREB1-201ENST00000302273 E9PCH4 1651 aa12.93□□□□□ -0.34
VPREB1-201ENST00000302273 RPGRIP1LQ68CZ1 1315 aa12.92□□□□□ -0.34
VPREB1-201ENST00000302273 PLA2R1Q13018 1463 aa12.92□□□□□ -0.34
VPREB1-201ENST00000302273 PREX1Q8TCU6 1659 aa12.91□□□□□ -0.34
VPREB1-201ENST00000302273 DHX57Q6P158 1386 aaKnown RBP12.91□□□□□ -0.34
VPREB1-201ENST00000302273 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.9□□□□□ -0.34
VPREB1-201ENST00000302273 DMRT2Q9Y5R5 561 aa12.9□□□□□ -0.34
VPREB1-201ENST00000302273 NEURL4Q96JN8 1562 aa12.9□□□□□ -0.35
VPREB1-201ENST00000302273 KDM5AP29375 1690 aaKnown RBP12.89□□□□□ -0.35
VPREB1-201ENST00000302273 ANKLE2Q86XL3 938 aa12.89□□□□□ -0.35
VPREB1-201ENST00000302273 UGGT1Q9NYU2 1555 aa12.89□□□□□ -0.35
VPREB1-201ENST00000302273 FOXD1Q16676 465 aa12.88□□□□□ -0.35
VPREB1-201ENST00000302273 EID1Q9Y6B2 187 aa12.88□□□□□ -0.35
VPREB1-201ENST00000302273 TMEM2Q9UHN6 1383 aa12.88□□□□□ -0.35
VPREB1-201ENST00000302273 SYNMO15061 1565 aa12.88□□□□□ -0.35
VPREB1-201ENST00000302273 CEP170BQ9Y4F5 1589 aaPredicted RBP12.88□□□□□ -0.35
VPREB1-201ENST00000302273 PIK3C2BO00750 1634 aa12.88□□□□□ -0.35
VPREB1-201ENST00000302273 TIMELESSQ9UNS1 1208 aa12.87□□□□□ -0.35
VPREB1-201ENST00000302273 MYO3AQ8NEV4 1616 aa12.87□□□□□ -0.35
VPREB1-201ENST00000302273 VGFO15240 615 aaPredicted RBP12.86□□□□□ -0.35
VPREB1-201ENST00000302273 ZNF142P52746 1687 aaPredicted RBP12.86□□□□□ -0.35
VPREB1-201ENST00000302273 SLIT1O75093 1534 aa12.85□□□□□ -0.35
VPREB1-201ENST00000302273 SPHKAPQ2M3C7 1700 aa12.85□□□□□ -0.35
VPREB1-201ENST00000302273 ARHGAP23Q9P227 1491 aa12.85□□□□□ -0.35
VPREB1-201ENST00000302273 ZFYVE9O95405 1425 aa12.84□□□□□ -0.35
VPREB1-201ENST00000302273 SPATA31E1Q6ZUB1 1445 aa12.84□□□□□ -0.35
VPREB1-201ENST00000302273 ADGRB3O60242 1522 aa12.83□□□□□ -0.35
VPREB1-201ENST00000302273 CHGAP10645 457 aaKnown RBP12.83□□□□□ -0.36
VPREB1-201ENST00000302273 TXNDC2Q86VQ3 553 aa12.83□□□□□ -0.36
VPREB1-201ENST00000302273 MED14O60244 1454 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms