RNA–Protein interactions for RNA: ENST00000297689.3

NFIL3-201, Transcript of nuclear factor, interleukin 3 regulated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NFIL3, Length 2,085 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFIL3-201ENST00000297689 DHX29Q7Z478 1369 aaKnown RBP27.3■■□□□ 1.96
NFIL3-201ENST00000297689 NEFLP07196 543 aa27.3■■□□□ 1.96
NFIL3-201ENST00000297689 CYB5RLQ6IPT4 315 aa27.3■■□□□ 1.96
NFIL3-201ENST00000297689 UNC13BO14795 1591 aa27.3■■□□□ 1.96
NFIL3-201ENST00000297689 ASXL2Q76L83 1435 aa27.3■■□□□ 1.96
NFIL3-201ENST00000297689 TRAPPC8Q9Y2L5 1435 aa27.29■■□□□ 1.96
NFIL3-201ENST00000297689 FAM135AQ9P2D6 1515 aa27.29■■□□□ 1.96
NFIL3-201ENST00000297689 BCANQ96GW7 911 aa27.28■■□□□ 1.96
NFIL3-201ENST00000297689 NPM1P06748 294 aaKnown RBP eCLIP27.27■■□□□ 1.96
NFIL3-201ENST00000297689 ABCA9Q8IUA7 1624 aa27.27■■□□□ 1.96
NFIL3-201ENST00000297689 DUOX2Q9NRD8 1548 aa27.25■■□□□ 1.95
NFIL3-201ENST00000297689 ZNF326Q5BKZ1 582 aaKnown RBP27.2■■□□□ 1.95
NFIL3-201ENST00000297689 MRS2Q9HD23 443 aa27.2■■□□□ 1.95
NFIL3-201ENST00000297689 IQGAP3Q86VI3 1631 aa27.19■■□□□ 1.94
NFIL3-201ENST00000297689 ERBINQ96RT1 1412 aa27.18■■□□□ 1.94
NFIL3-201ENST00000297689 PLA2R1Q13018 1463 aa27.17■■□□□ 1.94
NFIL3-201ENST00000297689 FANCAO15360 1455 aa27.16■■□□□ 1.94
NFIL3-201ENST00000297689 MAGI2Q86UL8 1455 aa27.16■■□□□ 1.94
NFIL3-201ENST00000297689 ROCK2O75116 1388 aaKnown RBP27.16■■□□□ 1.94
NFIL3-201ENST00000297689 ZBED9Q6R2W3 1325 aa27.15■■□□□ 1.94
NFIL3-201ENST00000297689 ZFYVE16Q7Z3T8 1539 aa27.15■■□□□ 1.94
NFIL3-201ENST00000297689 AFAP1Q8N556 730 aa27.15■■□□□ 1.94
NFIL3-201ENST00000297689 CARD11Q9BXL7 1154 aa27.14■■□□□ 1.94
NFIL3-201ENST00000297689 RTEL1-TNFRSF6BF6WH68 1400 aa27.13■■□□□ 1.93
NFIL3-201ENST00000297689 FAM9BQ8IZU0 186 aa27.12■■□□□ 1.93
NFIL3-201ENST00000297689 GRWD1Q9BQ67 446 aaKnown RBP eCLIP27.12■■□□□ 1.934e-7■■■□□ 15.2
NFIL3-201ENST00000297689 DCAF11Q8TEB1 546 aa27.12■■□□□ 1.93
NFIL3-201ENST00000297689 SPAG9O60271 1321 aaKnown RBP27.12■■□□□ 1.93
NFIL3-201ENST00000297689 PRAG1Q86YV5 1406 aa27.1■■□□□ 1.93
NFIL3-201ENST00000297689 ATP10AO60312 1499 aa27.09■■□□□ 1.93
NFIL3-201ENST00000297689 TRPM1Q7Z4N2 1603 aa27.09■■□□□ 1.93
NFIL3-201ENST00000297689 CCDC144AA2RUR9 1427 aa27.09■■□□□ 1.93
NFIL3-201ENST00000297689 INO80Q9ULG1 1556 aaPredicted RBP27.08■■□□□ 1.93
NFIL3-201ENST00000297689 KDM2AQ9Y2K7 1162 aa27.08■■□□□ 1.93
NFIL3-201ENST00000297689 ST20-MTHFSA0A0A6YYL1 179 aa27.07■■□□□ 1.92
NFIL3-201ENST00000297689 ADGRL1O94910 1474 aa27.06■■□□□ 1.92
NFIL3-201ENST00000297689 ERICH6BQ5W0A0 696 aa27.05■■□□□ 1.92
NFIL3-201ENST00000297689 GPRASP1Q5JY77 1395 aa27.05■■□□□ 1.92
NFIL3-201ENST00000297689 E9PCH4 1651 aa27.04■■□□□ 1.92
NFIL3-201ENST00000297689 ATP7AQ04656 1500 aa27.04■■□□□ 1.92
NFIL3-201ENST00000297689 SCAPERQ9BY12 1400 aa27.04■■□□□ 1.92
NFIL3-201ENST00000297689 A2MP01023 1474 aa27.03■■□□□ 1.92
NFIL3-201ENST00000297689 LAMC1P11047 1609 aa27.01■■□□□ 1.91
NFIL3-201ENST00000297689 DEPDC5O75140 1603 aa26.99■■□□□ 1.91
NFIL3-201ENST00000297689 KTN1Q86UP2 1357 aaKnown RBP26.97■■□□□ 1.91
NFIL3-201ENST00000297689 POLR3GLQ9BT43 218 aa26.96■■□□□ 1.91
NFIL3-201ENST00000297689 CD109Q6YHK3 1445 aa26.96■■□□□ 1.91
NFIL3-201ENST00000297689 PNISRQ8TF01 805 aaKnown RBP26.94■■□□□ 1.9
NFIL3-201ENST00000297689 PRDM15P57071 1507 aaPredicted RBP26.93■■□□□ 1.9
NFIL3-201ENST00000297689 KIDINS220Q9ULH0 1771 aa26.93■■□□□ 1.9
NFIL3-201ENST00000297689 NBPF1Q3BBV0 1214 aa26.92■■□□□ 1.9
NFIL3-201ENST00000297689 SMG6Q86US8 1419 aaKnown RBP26.91■■□□□ 1.9
NFIL3-201ENST00000297689 IRX6P78412 446 aaPredicted RBP26.91■■□□□ 1.9
NFIL3-201ENST00000297689 MYT1Q01538 1121 aa26.9■■□□□ 1.9
NFIL3-201ENST00000297689 GLI2P10070 1586 aa26.9■■□□□ 1.9
NFIL3-201ENST00000297689 EIF2AK4Q9P2K8 1649 aaKnown RBP26.9■■□□□ 1.9
NFIL3-201ENST00000297689 VWDEQ8N2E2 1590 aa26.9■■□□□ 1.9
NFIL3-201ENST00000297689 RGL3Q3MIN7 710 aa26.89■■□□□ 1.9
NFIL3-201ENST00000297689 LRPPRCP42704 1394 aaKnown RBP26.89■■□□□ 1.9
NFIL3-201ENST00000297689 CFAP74Q9C0B2 1584 aa26.89■■□□□ 1.89
NFIL3-201ENST00000297689 RALBP1Q15311 655 aa26.88■■□□□ 1.89
NFIL3-201ENST00000297689 BRD4O60885 1362 aaPredicted RBP26.88■■□□□ 1.89
NFIL3-201ENST00000297689 MROH1Q8NDA8 1641 aa26.87■■□□□ 1.89
NFIL3-201ENST00000297689 ZNF518AQ6AHZ1 1483 aa26.87■■□□□ 1.89
NFIL3-201ENST00000297689 MAP3K4Q9Y6R4 1608 aa26.86■■□□□ 1.89
NFIL3-201ENST00000297689 COL17A1Q9UMD9 1497 aaPredicted RBP26.86■■□□□ 1.89
NFIL3-201ENST00000297689 TESK2Q96S53 571 aa26.86■■□□□ 1.89
NFIL3-201ENST00000297689 PPP4R2Q9NY27 417 aa26.86■■□□□ 1.89
NFIL3-201ENST00000297689 TET3O43151 1660 aa26.86■■□□□ 1.89
NFIL3-201ENST00000297689 MYBBP1AQ9BQG0 1328 aaKnown RBP26.85■■□□□ 1.89
NFIL3-201ENST00000297689 DIP2BQ9P265 1576 aa26.85■■□□□ 1.89
NFIL3-201ENST00000297689 RBM19Q9Y4C8 960 aaKnown RBP26.84■■□□□ 1.89
NFIL3-201ENST00000297689 PER1O15534 1290 aaPredicted RBP26.83■■□□□ 1.89
NFIL3-201ENST00000297689 MYT1LQ9UL68 1186 aa26.83■■□□□ 1.89
NFIL3-201ENST00000297689 RNF17Q9BXT8 1623 aaKnown RBP26.83■■□□□ 1.89
NFIL3-201ENST00000297689 POGZQ7Z3K3 1410 aa26.82■■□□□ 1.88
NFIL3-201ENST00000297689 SPHKAPQ2M3C7 1700 aa26.82■■□□□ 1.88
NFIL3-201ENST00000297689 KIF3BO15066 747 aa26.82■■□□□ 1.88
NFIL3-201ENST00000297689 RNF123Q5XPI4 1314 aa26.82■■□□□ 1.88
NFIL3-201ENST00000297689 TRPM2O94759 1503 aa26.82■■□□□ 1.88
NFIL3-201ENST00000297689 TMC1Q8TDI8 760 aa26.81■■□□□ 1.88
NFIL3-201ENST00000297689 PARD3Q8TEW0 1356 aa26.81■■□□□ 1.88
NFIL3-201ENST00000297689 PTPRTO14522 1441 aa26.81■■□□□ 1.88
NFIL3-201ENST00000297689 FAM69CQ0P6D2 419 aa26.8■■□□□ 1.88
NFIL3-201ENST00000297689 CNGB1Q14028 1251 aaPredicted RBP26.79■■□□□ 1.88
NFIL3-201ENST00000297689 NUDCQ9Y266 331 aa26.79■■□□□ 1.88
NFIL3-201ENST00000297689 NEO1Q92859 1461 aa26.77■■□□□ 1.88
NFIL3-201ENST00000297689 KANK1Q14678 1352 aa26.77■■□□□ 1.88
NFIL3-201ENST00000297689 CLTCL1P53675 1640 aa26.77■■□□□ 1.88
NFIL3-201ENST00000297689 DISP3Q9P2K9 1392 aa26.76■■□□□ 1.87
NFIL3-201ENST00000297689 WASHC2CQ9Y4E1 1318 aa26.76■■□□□ 1.87
NFIL3-201ENST00000297689 CEP152O94986 1710 aa26.76■■□□□ 1.87
NFIL3-201ENST00000297689 MLH3Q9UHC1 1453 aa26.76■■□□□ 1.87
NFIL3-201ENST00000297689 FRMPD1Q5SYB0 1578 aa26.74■■□□□ 1.87
NFIL3-201ENST00000297689 MADDQ8WXG6 1647 aa26.74■■□□□ 1.87
NFIL3-201ENST00000297689 HECW2Q9P2P5 1572 aa26.74■■□□□ 1.87
NFIL3-201ENST00000297689 NLRP13Q86W25 1043 aa26.71■■□□□ 1.87
NFIL3-201ENST00000297689 STAC3Q96MF2 364 aa26.7■■□□□ 1.87
NFIL3-201ENST00000297689 ABCA6Q8N139 1617 aa26.7■■□□□ 1.86
NFIL3-201ENST00000297689 KIF13AQ9H1H9 1805 aa26.69■■□□□ 1.86
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms