RNA–Protein interactions for RNA: ENST00000296503.9

HMGB2-201, Transcript of high mobility group box 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGB2, Length 1,889 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB2-201ENST00000296503 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.37■□□□□ 0.539e-10■■■□□ 17.8
HMGB2-201ENST00000296503 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.37■□□□□ 0.531e-11■■■■■ 44.5
HMGB2-201ENST00000296503 C3P01024 1663 aa18.36■□□□□ 0.53
HMGB2-201ENST00000296503 PTPRKQ15262 1439 aa18.36■□□□□ 0.53
HMGB2-201ENST00000296503 SETD1BQ9UPS6 1966 aaKnown RBP18.35■□□□□ 0.53
HMGB2-201ENST00000296503 ERBINQ96RT1 1412 aa18.34■□□□□ 0.53
HMGB2-201ENST00000296503 ADGRL2O95490 1459 aa18.34■□□□□ 0.53
HMGB2-201ENST00000296503 RRBP1Q9P2E9 1410 aaKnown RBP18.34■□□□□ 0.53
HMGB2-201ENST00000296503 MROH2AA6NES4 1674 aa18.33■□□□□ 0.53
HMGB2-201ENST00000296503 HSPA2P54652 639 aa18.33■□□□□ 0.53
HMGB2-201ENST00000296503 EIF2AK4Q9P2K8 1649 aaKnown RBP18.33■□□□□ 0.53
HMGB2-201ENST00000296503 KDM5DQ9BY66 1539 aa18.31■□□□□ 0.52
HMGB2-201ENST00000296503 LMTK3Q96Q04 1460 aa18.31■□□□□ 0.52
HMGB2-201ENST00000296503 FBXO31Q5XUX0 539 aaPredicted RBP18.31■□□□□ 0.52
HMGB2-201ENST00000296503 UHRF1BP1Q6BDS2 1440 aa18.3■□□□□ 0.52
HMGB2-201ENST00000296503 RNF17Q9BXT8 1623 aaKnown RBP18.3■□□□□ 0.52
HMGB2-201ENST00000296503 ANKRD50Q9ULJ7 1429 aa18.3■□□□□ 0.52
HMGB2-201ENST00000296503 ROCK1Q13464 1354 aa18.29■□□□□ 0.52
HMGB2-201ENST00000296503 KANK1Q14678 1352 aa18.29■□□□□ 0.52
HMGB2-201ENST00000296503 NPATQ14207 1427 aa18.29■□□□□ 0.52
HMGB2-201ENST00000296503 FAM135AQ9P2D6 1515 aa18.28■□□□□ 0.52
HMGB2-201ENST00000296503 PREX1Q8TCU6 1659 aa18.28■□□□□ 0.52
HMGB2-201ENST00000296503 ABCC3O15438 1527 aa18.25■□□□□ 0.51
HMGB2-201ENST00000296503 MROH1Q8NDA8 1641 aa18.25■□□□□ 0.51
HMGB2-201ENST00000296503 PZPP20742 1482 aa18.23■□□□□ 0.51
HMGB2-201ENST00000296503 ZC3H13Q5T200 1668 aaKnown RBP18.22■□□□□ 0.51
HMGB2-201ENST00000296503 TNRQ92752 1358 aa18.22■□□□□ 0.51
HMGB2-201ENST00000296503 PRDM15P57071 1507 aaPredicted RBP18.22■□□□□ 0.51
HMGB2-201ENST00000296503 CEP152O94986 1710 aa18.21■□□□□ 0.51
HMGB2-201ENST00000296503 DEPDC5O75140 1603 aa18.2■□□□□ 0.5
HMGB2-201ENST00000296503 CFAP65Q6ZU64 1925 aaKnown RBP18.2■□□□□ 0.5
HMGB2-201ENST00000296503 CAMSAP1Q5T5Y3 1602 aa18.18■□□□□ 0.5
HMGB2-201ENST00000296503 ARHGAP31Q2M1Z3 1444 aa18.16■□□□□ 0.5
HMGB2-201ENST00000296503 NUP155O75694 1391 aa18.15■□□□□ 0.5
HMGB2-201ENST00000296503 MYO3AQ8NEV4 1616 aa18.15■□□□□ 0.5
HMGB2-201ENST00000296503 VWDEQ8N2E2 1590 aa18.14■□□□□ 0.5
HMGB2-201ENST00000296503 DMRT2Q9Y5R5 561 aa18.14■□□□□ 0.49
HMGB2-201ENST00000296503 ERVK-7P63135 1459 aa18.14■□□□□ 0.49
HMGB2-201ENST00000296503 LMTK2Q8IWU2 1503 aa18.14■□□□□ 0.49
HMGB2-201ENST00000296503 A2ML1A8K2U0 1454 aa18.13■□□□□ 0.49
HMGB2-201ENST00000296503 NAIPQ13075 1403 aa18.13■□□□□ 0.49
HMGB2-201ENST00000296503 THEMISQ8N1K5 641 aaPredicted RBP18.13■□□□□ 0.49
HMGB2-201ENST00000296503 CEP170BQ9Y4F5 1589 aaPredicted RBP18.13■□□□□ 0.49
HMGB2-201ENST00000296503 TRIM52Q96A61 297 aa18.12■□□□□ 0.49
HMGB2-201ENST00000296503 SPATA31D1Q6ZQQ2 1576 aa18.11■□□□□ 0.49
HMGB2-201ENST00000296503 NLRP1Q9C000 1473 aa18.11■□□□□ 0.49
HMGB2-201ENST00000296503 NCKAP5LQ9HCH0 1330 aa18.11■□□□□ 0.49
HMGB2-201ENST00000296503 UNC13BO14795 1591 aa18.1■□□□□ 0.49
HMGB2-201ENST00000296503 HFM1A2PYH4 1435 aa18.09■□□□□ 0.49
HMGB2-201ENST00000296503 ZNF142P52746 1687 aaPredicted RBP18.09■□□□□ 0.49
HMGB2-201ENST00000296503 STAG3Q9UJ98 1225 aa18.09■□□□□ 0.49
HMGB2-201ENST00000296503 PKD2Q13563 968 aa18.07■□□□□ 0.48
HMGB2-201ENST00000296503 EFCAB6Q5THR3 1501 aa18.07■□□□□ 0.48
HMGB2-201ENST00000296503 STRCQ7RTU9 1775 aa18.07■□□□□ 0.48
HMGB2-201ENST00000296503 UGGT1Q9NYU2 1555 aa18.07■□□□□ 0.48
HMGB2-201ENST00000296503 IDI1Q13907 227 aa18.06■□□□□ 0.48
HMGB2-201ENST00000296503 TET3O43151 1660 aa18.05■□□□□ 0.48
HMGB2-201ENST00000296503 GCC2Q8IWJ2 1684 aa18.05■□□□□ 0.48
HMGB2-201ENST00000296503 HRCP23327 699 aa18.05■□□□□ 0.48
HMGB2-201ENST00000296503 ANKLE2Q86XL3 938 aa18.05■□□□□ 0.48
HMGB2-201ENST00000296503 SLC52A1Q9NWF4 448 aa18.05■□□□□ 0.48
HMGB2-201ENST00000296503 IQGAP3Q86VI3 1631 aa18.04■□□□□ 0.48
HMGB2-201ENST00000296503 RPRD2Q5VT52 1461 aaKnown RBP18.04■□□□□ 0.48
HMGB2-201ENST00000296503 NOS1P29475 1434 aa18.03■□□□□ 0.48
HMGB2-201ENST00000296503 PLA2R1Q13018 1463 aa18.03■□□□□ 0.48
HMGB2-201ENST00000296503 PTPRTO14522 1441 aa18.02■□□□□ 0.47
HMGB2-201ENST00000296503 SLC4A1APQ9BWU0 796 aaKnown RBP18.01■□□□□ 0.47
HMGB2-201ENST00000296503 CHGAP10645 457 aaKnown RBP17.99■□□□□ 0.47
HMGB2-201ENST00000296503 E9PCH4 1651 aa17.99■□□□□ 0.47
HMGB2-201ENST00000296503 SYNMO15061 1565 aa17.99■□□□□ 0.47
HMGB2-201ENST00000296503 SETD5Q9C0A6 1442 aa17.98■□□□□ 0.47
HMGB2-201ENST00000296503 TXNDC2Q86VQ3 553 aa17.98■□□□□ 0.47
HMGB2-201ENST00000296503 EID1Q9Y6B2 187 aa17.98■□□□□ 0.47
HMGB2-201ENST00000296503 PIK3C2BO00750 1634 aa17.97■□□□□ 0.47
HMGB2-201ENST00000296503 UBR1Q8IWV7 1749 aa17.97■□□□□ 0.47
HMGB2-201ENST00000296503 ACIN1Q9UKV3 1341 aaKnown RBP17.95■□□□□ 0.46
HMGB2-201ENST00000296503 LTKP29376 864 aa17.95■□□□□ 0.46
HMGB2-201ENST00000296503 TMEM2Q9UHN6 1383 aa17.93■□□□□ 0.46
HMGB2-201ENST00000296503 MPHOSPH9Q99550 1183 aa17.92■□□□□ 0.46
HMGB2-201ENST00000296503 NPHP4O75161 1426 aaPredicted RBP17.92■□□□□ 0.46
HMGB2-201ENST00000296503 POLR1AO95602 1720 aaPredicted RBP17.92■□□□□ 0.46
HMGB2-201ENST00000296503 HDGFP51858 240 aaKnown RBP17.91■□□□□ 0.46
HMGB2-201ENST00000296503 CERKQ8TCT0 537 aa17.91■□□□□ 0.46
HMGB2-201ENST00000296503 RAB3GAP2Q9H2M9 1393 aa17.91■□□□□ 0.46
HMGB2-201ENST00000296503 FOXD1Q16676 465 aa17.9■□□□□ 0.46
HMGB2-201ENST00000296503 ARHGAP23Q9P227 1491 aa17.9■□□□□ 0.46
HMGB2-201ENST00000296503 BCANQ96GW7 911 aa17.9■□□□□ 0.46
HMGB2-201ENST00000296503 SLIT1O75093 1534 aa17.9■□□□□ 0.46
HMGB2-201ENST00000296503 ZNF335Q9H4Z2 1342 aaPredicted RBP17.9■□□□□ 0.46
HMGB2-201ENST00000296503 SCAF11Q99590 1463 aaKnown RBP17.89■□□□□ 0.45
HMGB2-201ENST00000296503 ADGRB3O60242 1522 aa17.89■□□□□ 0.45
HMGB2-201ENST00000296503 NEURL4Q96JN8 1562 aa17.89■□□□□ 0.45
HMGB2-201ENST00000296503 MED14O60244 1454 aa17.89■□□□□ 0.45
HMGB2-201ENST00000296503 KDM5AP29375 1690 aaKnown RBP17.88■□□□□ 0.45
HMGB2-201ENST00000296503 PPP1R15AO75807 674 aaPredicted RBP17.88■□□□□ 0.45
HMGB2-201ENST00000296503 SPHKAPQ2M3C7 1700 aa17.87■□□□□ 0.45
HMGB2-201ENST00000296503 ZNF326Q5BKZ1 582 aaKnown RBP17.87■□□□□ 0.45
HMGB2-201ENST00000296503 SENP3Q9H4L4 574 aaPredicted RBP17.87■□□□□ 0.45
HMGB2-201ENST00000296503 NUTM2DQ5VT03 806 aaPredicted RBP17.86■□□□□ 0.45
HMGB2-201ENST00000296503 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.86■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms