RNA–Protein interactions for RNA: ENST00000296142.3

RTP3-201, Transcript of receptor transporter protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTP3, Length 1,321 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTP3-201ENST00000296142 HSPA1LP34931 641 aa13.47□□□□□ -0.25
RTP3-201ENST00000296142 A2ML1A8K2U0 1454 aa13.47□□□□□ -0.25
RTP3-201ENST00000296142 MBD5Q9P267 1494 aa13.47□□□□□ -0.25
RTP3-201ENST00000296142 NEURL4Q96JN8 1562 aa13.46□□□□□ -0.25
RTP3-201ENST00000296142 TNRQ92752 1358 aa13.45□□□□□ -0.26
RTP3-201ENST00000296142 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.45□□□□□ -0.26
RTP3-201ENST00000296142 DHX29Q7Z478 1369 aaKnown RBP13.44□□□□□ -0.26
RTP3-201ENST00000296142 EHBP1L1Q8N3D4 1523 aa13.44□□□□□ -0.26
RTP3-201ENST00000296142 WASHC2CQ9Y4E1 1318 aa13.43□□□□□ -0.26
RTP3-201ENST00000296142 STRCP1A6NGW2 1772 aa13.42□□□□□ -0.26
RTP3-201ENST00000296142 MED1Q15648 1581 aaPredicted RBP13.42□□□□□ -0.26
RTP3-201ENST00000296142 CAMSAP2Q08AD1 1489 aa13.42□□□□□ -0.26
RTP3-201ENST00000296142 SHANK2Q9UPX8 1470 aa13.41□□□□□ -0.26
RTP3-201ENST00000296142 RTEL1-TNFRSF6BF6WH68 1400 aa13.4□□□□□ -0.26
RTP3-201ENST00000296142 KDM5DQ9BY66 1539 aa13.4□□□□□ -0.27
RTP3-201ENST00000296142 TOM1O60784 492 aa13.39□□□□□ -0.27
RTP3-201ENST00000296142 PZPP20742 1482 aa13.39□□□□□ -0.27
RTP3-201ENST00000296142 NCOA2Q15596 1464 aa13.39□□□□□ -0.27
RTP3-201ENST00000296142 CCDC141Q6ZP82 1450 aa13.39□□□□□ -0.27
RTP3-201ENST00000296142 CEP162Q5TB80 1403 aa13.39□□□□□ -0.27
RTP3-201ENST00000296142 ANKLE2Q86XL3 938 aa13.39□□□□□ -0.27
RTP3-201ENST00000296142 VWDEQ8N2E2 1590 aa13.38□□□□□ -0.27
RTP3-201ENST00000296142 CEP152O94986 1710 aa13.38□□□□□ -0.27
RTP3-201ENST00000296142 UGGT1Q9NYU2 1555 aa13.38□□□□□ -0.27
RTP3-201ENST00000296142 ALKQ9UM73 1620 aa13.37□□□□□ -0.27
RTP3-201ENST00000296142 CPS1P31327 1500 aa13.36□□□□□ -0.27
RTP3-201ENST00000296142 NPHP4O75161 1426 aaPredicted RBP13.36□□□□□ -0.27
RTP3-201ENST00000296142 MIA2Q96PC5 1412 aa13.36□□□□□ -0.27
RTP3-201ENST00000296142 IQGAP1P46940 1657 aa13.36□□□□□ -0.27
RTP3-201ENST00000296142 THEMISQ8N1K5 641 aaPredicted RBP13.36□□□□□ -0.27
RTP3-201ENST00000296142 PHF23Q9BUL5 403 aaPredicted RBP13.34□□□□□ -0.27
RTP3-201ENST00000296142 FAM135AQ9P2D6 1515 aa13.33□□□□□ -0.28
RTP3-201ENST00000296142 TSPY4P0CV99 314 aa13.33□□□□□ -0.28
RTP3-201ENST00000296142 TSPY10P0CW01 314 aa13.33□□□□□ -0.28
RTP3-201ENST00000296142 DEPDC5O75140 1603 aa13.32□□□□□ -0.28
RTP3-201ENST00000296142 ABCC3O15438 1527 aa13.31□□□□□ -0.28
RTP3-201ENST00000296142 XIRP1Q702N8 1843 aaKnown RBP13.31□□□□□ -0.28
RTP3-201ENST00000296142 NLRP1Q9C000 1473 aa13.31□□□□□ -0.28
RTP3-201ENST00000296142 LOC105371045A0A1W2PR82 267 aa13.31□□□□□ -0.28
RTP3-201ENST00000296142 ARHGEF5Q12774 1597 aa13.3□□□□□ -0.28
RTP3-201ENST00000296142 UBR1Q8IWV7 1749 aa13.3□□□□□ -0.28
RTP3-201ENST00000296142 KANK4Q5T7N3 995 aaPredicted RBP13.3□□□□□ -0.28
RTP3-201ENST00000296142 RNF17Q9BXT8 1623 aaKnown RBP13.3□□□□□ -0.28
RTP3-201ENST00000296142 ZC3H13Q5T200 1668 aaKnown RBP13.29□□□□□ -0.28
RTP3-201ENST00000296142 MED14O60244 1454 aa13.29□□□□□ -0.28
RTP3-201ENST00000296142 LRRC7Q96NW7 1537 aa13.29□□□□□ -0.28
RTP3-201ENST00000296142 MROH1Q8NDA8 1641 aa13.29□□□□□ -0.28
RTP3-201ENST00000296142 ERVK-7P63135 1459 aa13.28□□□□□ -0.28
RTP3-201ENST00000296142 RSPH4AQ5TD94 716 aa13.28□□□□□ -0.28
RTP3-201ENST00000296142 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.28□□□□□ -0.28
RTP3-201ENST00000296142 LTKP29376 864 aa13.27□□□□□ -0.29
RTP3-201ENST00000296142 RBM33Q96EV2 1170 aaKnown RBP13.27□□□□□ -0.29
RTP3-201ENST00000296142 LRRC9Q6ZRR7 1453 aa13.26□□□□□ -0.29
RTP3-201ENST00000296142 TXNDC2Q86VQ3 553 aa13.25□□□□□ -0.29
RTP3-201ENST00000296142 MAST1Q9Y2H9 1570 aa13.24□□□□□ -0.29
RTP3-201ENST00000296142 RRP7BPQ9NSQ0 103 aa13.24□□□□□ -0.29
RTP3-201ENST00000296142 EIF2AK4Q9P2K8 1649 aaKnown RBP13.24□□□□□ -0.29
RTP3-201ENST00000296142 PIK3C2BO00750 1634 aa13.23□□□□□ -0.29
RTP3-201ENST00000296142 SCAF11Q99590 1463 aaKnown RBP13.23□□□□□ -0.29
RTP3-201ENST00000296142 RGS17Q9UGC6 210 aaPredicted RBP13.22□□□□□ -0.29
RTP3-201ENST00000296142 SYNMO15061 1565 aa13.22□□□□□ -0.29
RTP3-201ENST00000296142 VPS8Q8N3P4 1428 aa13.21□□□□□ -0.3
RTP3-201ENST00000296142 STAG3Q9UJ98 1225 aa13.2□□□□□ -0.3
RTP3-201ENST00000296142 CHIC2Q9UKJ5 165 aa13.2□□□□□ -0.3
RTP3-201ENST00000296142 CROCC2H7BZ55 1655 aa13.2□□□□□ -0.3
RTP3-201ENST00000296142 SLC26A8Q96RN1 970 aa13.19□□□□□ -0.3
RTP3-201ENST00000296142 MYOM3Q5VTT5 1437 aa13.19□□□□□ -0.3
RTP3-201ENST00000296142 MYO5BQ9ULV0 1848 aa13.19□□□□□ -0.3
RTP3-201ENST00000296142 KIF15Q9NS87 1388 aa13.19□□□□□ -0.3
RTP3-201ENST00000296142 DUOX2Q9NRD8 1548 aa13.19□□□□□ -0.3
RTP3-201ENST00000296142 EID1Q9Y6B2 187 aa13.17□□□□□ -0.3
RTP3-201ENST00000296142 PTPN23Q9H3S7 1636 aa13.17□□□□□ -0.3
RTP3-201ENST00000296142 ARHGAP23Q9P227 1491 aa13.17□□□□□ -0.3
RTP3-201ENST00000296142 SLIT1O75093 1534 aa13.16□□□□□ -0.3
RTP3-201ENST00000296142 ABCC5O15440 1437 aa13.16□□□□□ -0.3
RTP3-201ENST00000296142 ROBO1Q9Y6N7 1651 aa13.16□□□□□ -0.3
RTP3-201ENST00000296142 POTEAQ6S8J7 498 aa13.15□□□□□ -0.3
RTP3-201ENST00000296142 PRDM15P57071 1507 aaPredicted RBP13.15□□□□□ -0.3
RTP3-201ENST00000296142 SETD1AO15047 1707 aaKnown RBP13.15□□□□□ -0.3
RTP3-201ENST00000296142 IDI1Q13907 227 aa13.14□□□□□ -0.31
RTP3-201ENST00000296142 PROSER2Q86WR7 435 aaPredicted RBP13.14□□□□□ -0.31
RTP3-201ENST00000296142 BCANQ96GW7 911 aa13.14□□□□□ -0.31
RTP3-201ENST00000296142 TMEM94Q12767 1356 aa13.14□□□□□ -0.31
RTP3-201ENST00000296142 TMEM2Q9UHN6 1383 aa13.13□□□□□ -0.31
RTP3-201ENST00000296142 EFCAB6Q5THR3 1501 aa13.12□□□□□ -0.31
RTP3-201ENST00000296142 DAPK1P53355 1430 aa13.12□□□□□ -0.31
RTP3-201ENST00000296142 ARHGAP31Q2M1Z3 1444 aa13.11□□□□□ -0.31
RTP3-201ENST00000296142 KANK1Q14678 1352 aa13.11□□□□□ -0.31
RTP3-201ENST00000296142 ERBINQ96RT1 1412 aa13.1□□□□□ -0.31
RTP3-201ENST00000296142 PHLPP1O60346 1717 aa13.1□□□□□ -0.31
RTP3-201ENST00000296142 MAP3K1Q13233 1512 aa13.1□□□□□ -0.31
RTP3-201ENST00000296142 KCNA6P17658 529 aa13.1□□□□□ -0.31
RTP3-201ENST00000296142 TET3O43151 1660 aa13.09□□□□□ -0.31
RTP3-201ENST00000296142 FAM135BQ49AJ0 1406 aa13.09□□□□□ -0.31
RTP3-201ENST00000296142 NUTM2DQ5VT03 806 aaPredicted RBP13.09□□□□□ -0.31
RTP3-201ENST00000296142 GCC2Q8IWJ2 1684 aa13.08□□□□□ -0.32
RTP3-201ENST00000296142 APLP2Q06481 763 aa13.08□□□□□ -0.32
RTP3-201ENST00000296142 CHD2O14647 1828 aaKnown RBP13.07□□□□□ -0.32
RTP3-201ENST00000296142 FGD6Q6ZV73 1430 aa13.06□□□□□ -0.32
RTP3-201ENST00000296142 CHGAP10645 457 aaKnown RBP13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms