RNA–Protein interactions for RNA: ENST00000295008.8

MRPL55-201, Transcript of mitochondrial ribosomal protein L55, humanhuman

APPRIS P1 TSL 2 BASIC

Gene MRPL55, Length 632 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-201ENST00000295008 MROH1Q8NDA8 1641 aa23.77■■□□□ 1.4
MRPL55-201ENST00000295008 PRDM15P57071 1507 aaPredicted RBP23.75■■□□□ 1.39
MRPL55-201ENST00000295008 KIF3BO15066 747 aa23.75■■□□□ 1.39
MRPL55-201ENST00000295008 ARID4BQ4LE39 1312 aaPredicted RBP23.71■■□□□ 1.39
MRPL55-201ENST00000295008 KDM5DQ9BY66 1539 aa23.69■■□□□ 1.38
MRPL55-201ENST00000295008 VWDEQ8N2E2 1590 aa23.69■■□□□ 1.38
MRPL55-201ENST00000295008 IQGAP3Q86VI3 1631 aa23.68■■□□□ 1.38
MRPL55-201ENST00000295008 HRCP23327 699 aa23.66■■□□□ 1.38
MRPL55-201ENST00000295008 GGT6Q6P531 493 aa23.66■■□□□ 1.38
MRPL55-201ENST00000295008 CEP152O94986 1710 aa23.65■■□□□ 1.38
MRPL55-201ENST00000295008 ZC3H13Q5T200 1668 aaKnown RBP23.65■■□□□ 1.38
MRPL55-201ENST00000295008 MLECQ14165 292 aa23.65■■□□□ 1.38
MRPL55-201ENST00000295008 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.65■■□□□ 1.38
MRPL55-201ENST00000295008 TRIM52Q96A61 297 aa23.64■■□□□ 1.37
MRPL55-201ENST00000295008 NUP155O75694 1391 aa23.64■■□□□ 1.37
MRPL55-201ENST00000295008 FAM135AQ9P2D6 1515 aa23.64■■□□□ 1.37
MRPL55-201ENST00000295008 ABCC3O15438 1527 aa23.63■■□□□ 1.37
MRPL55-201ENST00000295008 KANK1Q14678 1352 aa23.63■■□□□ 1.37
MRPL55-201ENST00000295008 PZPP20742 1482 aa23.62■■□□□ 1.37
MRPL55-201ENST00000295008 ACIN1Q9UKV3 1341 aaKnown RBP23.61■■□□□ 1.37
MRPL55-201ENST00000295008 CLTCQ00610 1675 aaKnown RBP23.6■■□□□ 1.37
MRPL55-201ENST00000295008 FER1L4A9Z1Z3 1794 aa23.6■■□□□ 1.37
MRPL55-201ENST00000295008 LMTK2Q8IWU2 1503 aa23.6■■□□□ 1.37
MRPL55-201ENST00000295008 TET3O43151 1660 aa23.59■■□□□ 1.37
MRPL55-201ENST00000295008 ADAMTSL3P82987 1691 aa23.59■■□□□ 1.37
MRPL55-201ENST00000295008 CAMSAP1Q5T5Y3 1602 aa23.59■■□□□ 1.37
MRPL55-201ENST00000295008 MADDQ8WXG6 1647 aa23.58■■□□□ 1.36
MRPL55-201ENST00000295008 EFCAB6Q5THR3 1501 aa23.56■■□□□ 1.36
MRPL55-201ENST00000295008 PPP6R1Q9UPN7 881 aa23.55■■□□□ 1.36
MRPL55-201ENST00000295008 WASHC2CQ9Y4E1 1318 aa23.55■■□□□ 1.36
MRPL55-201ENST00000295008 MROH2AA6NES4 1674 aa23.54■■□□□ 1.36
MRPL55-201ENST00000295008 RIMS1Q86UR5 1692 aaKnown RBP23.53■■□□□ 1.36
MRPL55-201ENST00000295008 CNTLNQ9NXG0 1405 aa23.52■■□□□ 1.36
MRPL55-201ENST00000295008 E9PCH4 1651 aa23.52■■□□□ 1.36
MRPL55-201ENST00000295008 SLC4A1APQ9BWU0 796 aaKnown RBP23.51■■□□□ 1.35
MRPL55-201ENST00000295008 MPHOSPH9Q99550 1183 aa23.5■■□□□ 1.35
MRPL55-201ENST00000295008 DHX57Q6P158 1386 aaKnown RBP23.5■■□□□ 1.35
MRPL55-201ENST00000295008 ESF1Q9H501 851 aaKnown RBP23.49■■□□□ 1.35
MRPL55-201ENST00000295008 C3P01024 1663 aa23.46■■□□□ 1.35
MRPL55-201ENST00000295008 NPATQ14207 1427 aa23.46■■□□□ 1.35
MRPL55-201ENST00000295008 ARHGAP31Q2M1Z3 1444 aa23.46■■□□□ 1.35
MRPL55-201ENST00000295008 PKD2Q13563 968 aa23.45■■□□□ 1.34
MRPL55-201ENST00000295008 RPRD2Q5VT52 1461 aaKnown RBP23.44■■□□□ 1.34
MRPL55-201ENST00000295008 KDM4FA0A1W2PPD8 638 aa23.43■■□□□ 1.34
MRPL55-201ENST00000295008 ZMYM3Q14202 1370 aa23.42■■□□□ 1.34
MRPL55-201ENST00000295008 PREX1Q8TCU6 1659 aa23.42■■□□□ 1.34
MRPL55-201ENST00000295008 SPHKAPQ2M3C7 1700 aa23.42■■□□□ 1.34
MRPL55-201ENST00000295008 FOXD1Q16676 465 aa23.41■■□□□ 1.34
MRPL55-201ENST00000295008 ERVK-7P63135 1459 aa23.38■■□□□ 1.33
MRPL55-201ENST00000295008 SPATA31D1Q6ZQQ2 1576 aa23.38■■□□□ 1.33
MRPL55-201ENST00000295008 PTPRMP28827 1452 aa23.37■■□□□ 1.33
MRPL55-201ENST00000295008 TRPM2O94759 1503 aa23.36■■□□□ 1.33
MRPL55-201ENST00000295008 SYNMO15061 1565 aa23.35■■□□□ 1.33
MRPL55-201ENST00000295008 PTPRTO14522 1441 aa23.35■■□□□ 1.33
MRPL55-201ENST00000295008 NOS1P29475 1434 aa23.35■■□□□ 1.33
MRPL55-201ENST00000295008 PLA2R1Q13018 1463 aa23.35■■□□□ 1.33
MRPL55-201ENST00000295008 CEBPAP49715 358 aaPredicted RBP23.33■■□□□ 1.33
MRPL55-201ENST00000295008 FBXO31Q5XUX0 539 aaPredicted RBP23.33■■□□□ 1.33
MRPL55-201ENST00000295008 CFAP65Q6ZU64 1925 aaKnown RBP23.33■■□□□ 1.32
MRPL55-201ENST00000295008 ANKRD30BQ9BXX2 1392 aa23.32■■□□□ 1.32
MRPL55-201ENST00000295008 PLPPR3Q6T4P5 718 aa23.31■■□□□ 1.32
MRPL55-201ENST00000295008 CCER1Q8TC90 406 aaPredicted RBP23.31■■□□□ 1.32
MRPL55-201ENST00000295008 UGGT1Q9NYU2 1555 aa23.31■■□□□ 1.32
MRPL55-201ENST00000295008 CLTCL1P53675 1640 aa23.3■■□□□ 1.32
MRPL55-201ENST00000295008 PIK3C2BO00750 1634 aa23.3■■□□□ 1.32
MRPL55-201ENST00000295008 TNRQ92752 1358 aa23.27■■□□□ 1.32
MRPL55-201ENST00000295008 MYO3AQ8NEV4 1616 aa23.26■■□□□ 1.31
MRPL55-201ENST00000295008 CCDC144AA2RUR9 1427 aa23.25■■□□□ 1.31
MRPL55-201ENST00000295008 CLSPNQ9HAW4 1339 aa23.23■■□□□ 1.31
MRPL55-201ENST00000295008 NLRP1Q9C000 1473 aa23.19■■□□□ 1.3
MRPL55-201ENST00000295008 KIF1BO60333 1816 aa23.18■■□□□ 1.3
MRPL55-201ENST00000295008 SIN3AQ96ST3 1273 aa23.18■■□□□ 1.3
MRPL55-201ENST00000295008 ZNF142P52746 1687 aaPredicted RBP23.18■■□□□ 1.3
MRPL55-201ENST00000295008 ADGRB3O60242 1522 aa23.18■■□□□ 1.3
MRPL55-201ENST00000295008 SLC52A1Q9NWF4 448 aa23.17■■□□□ 1.3
MRPL55-201ENST00000295008 IDI1Q13907 227 aa23.16■■□□□ 1.3
MRPL55-201ENST00000295008 TMEM131LA2VDJ0 1609 aa23.15■■□□□ 1.3
MRPL55-201ENST00000295008 CEP170BQ9Y4F5 1589 aaPredicted RBP23.15■■□□□ 1.3
MRPL55-201ENST00000295008 UBR1Q8IWV7 1749 aa23.14■■□□□ 1.3
MRPL55-201ENST00000295008 KDM5AP29375 1690 aaKnown RBP23.14■■□□□ 1.29
MRPL55-201ENST00000295008 A2ML1A8K2U0 1454 aa23.13■■□□□ 1.29
MRPL55-201ENST00000295008 NEUROD1Q13562 356 aa23.13■■□□□ 1.29
MRPL55-201ENST00000295008 NEURL4Q96JN8 1562 aa23.13■■□□□ 1.29
MRPL55-201ENST00000295008 MYO5BQ9ULV0 1848 aa23.12■■□□□ 1.29
MRPL55-201ENST00000295008 UHRF1BP1Q6BDS2 1440 aa23.12■■□□□ 1.29
MRPL55-201ENST00000295008 SPATA31E1Q6ZUB1 1445 aa23.12■■□□□ 1.29
MRPL55-201ENST00000295008 ILDR1Q86SU0 546 aaPredicted RBP23.11■■□□□ 1.29
MRPL55-201ENST00000295008 CHGAP10645 457 aaKnown RBP23.09■■□□□ 1.29
MRPL55-201ENST00000295008 SETD1BQ9UPS6 1966 aaKnown RBP23.08■■□□□ 1.29
MRPL55-201ENST00000295008 STAG3Q9UJ98 1225 aa23.05■■□□□ 1.28
MRPL55-201ENST00000295008 IFT172Q9UG01 1749 aa23.05■■□□□ 1.28
MRPL55-201ENST00000295008 NEXMIFQ5QGS0 1516 aa23.03■■□□□ 1.28
MRPL55-201ENST00000295008 TONSLQ96HA7 1378 aa23.02■■□□□ 1.28
MRPL55-201ENST00000295008 PPLO60437 1756 aa23.02■■□□□ 1.28
MRPL55-201ENST00000295008 RGL3Q3MIN7 710 aa23.02■■□□□ 1.28
MRPL55-201ENST00000295008 LMTK3Q96Q04 1460 aa23.02■■□□□ 1.28
MRPL55-201ENST00000295008 ZNF326Q5BKZ1 582 aaKnown RBP23■■□□□ 1.27
MRPL55-201ENST00000295008 SLIT1O75093 1534 aa22.99■■□□□ 1.27
MRPL55-201ENST00000295008 ARHGAP23Q9P227 1491 aa22.98■■□□□ 1.27
MRPL55-201ENST00000295008 TMEM2Q9UHN6 1383 aa22.98■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms