RNA–Protein interactions for RNA: ENST00000291386.3

SSU72-201, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSU72, Length 1,290 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-201ENST00000291386 CNTLNQ9NXG0 1405 aa40.93■■■■■ 4.14
SSU72-201ENST00000291386 ITGAEP38570 1179 aa40.91■■■■■ 4.14
SSU72-201ENST00000291386 FAM135AQ9P2D6 1515 aa40.91■■■■■ 4.14
SSU72-201ENST00000291386 ESF1Q9H501 851 aaKnown RBP40.88■■■■■ 4.13
SSU72-201ENST00000291386 MROH2AA6NES4 1674 aa40.87■■■■■ 4.13
SSU72-201ENST00000291386 ANKRD50Q9ULJ7 1429 aa40.84■■■■■ 4.13
SSU72-201ENST00000291386 MROH1Q8NDA8 1641 aa40.83■■■■■ 4.13
SSU72-201ENST00000291386 CLTCQ00610 1675 aaKnown RBP40.82■■■■■ 4.13
SSU72-201ENST00000291386 DEPDC5O75140 1603 aa40.82■■■■■ 4.12
SSU72-201ENST00000291386 KDM5DQ9BY66 1539 aa40.79■■■■■ 4.12
SSU72-201ENST00000291386 C3P01024 1663 aa40.78■■■■■ 4.12
SSU72-201ENST00000291386 PRDM15P57071 1507 aaPredicted RBP40.77■■■■■ 4.12
SSU72-201ENST00000291386 ZC3H13Q5T200 1668 aaKnown RBP40.75■■■■■ 4.11
SSU72-201ENST00000291386 ZMYM3Q14202 1370 aa40.74■■■■■ 4.11
SSU72-201ENST00000291386 WASHC2CQ9Y4E1 1318 aa40.72■■■■■ 4.11
SSU72-201ENST00000291386 CEBPAP49715 358 aaPredicted RBP40.7■■■■■ 4.11
SSU72-201ENST00000291386 ABCC3O15438 1527 aa40.69■■■■■ 4.1
SSU72-201ENST00000291386 GCC2Q8IWJ2 1684 aa40.67■■■■■ 4.1
SSU72-201ENST00000291386 VWDEQ8N2E2 1590 aa40.66■■■■■ 4.1
SSU72-201ENST00000291386 NAIPQ13075 1403 aa40.66■■■■■ 4.1
SSU72-201ENST00000291386 HFM1A2PYH4 1435 aa40.65■■■■■ 4.1
SSU72-201ENST00000291386 KANK1Q14678 1352 aa40.62■■■■■ 4.09
SSU72-201ENST00000291386 CEP152O94986 1710 aa40.62■■■■■ 4.09
SSU72-201ENST00000291386 UNC13BO14795 1591 aa40.62■■■■■ 4.09
SSU72-201ENST00000291386 PLPPR3Q6T4P5 718 aa40.62■■■■■ 4.09
SSU72-201ENST00000291386 SETD1BQ9UPS6 1966 aaKnown RBP40.62■■■■■ 4.09
SSU72-201ENST00000291386 NPATQ14207 1427 aa40.6■■■■■ 4.09
SSU72-201ENST00000291386 LMTK2Q8IWU2 1503 aa40.59■■■■■ 4.09
SSU72-201ENST00000291386 GRWD1Q9BQ67 446 aaKnown RBP eCLIP40.58■■■■■ 4.091e-7■■■□□ 17.8
SSU72-201ENST00000291386 PZPP20742 1482 aa40.58■■■■■ 4.09
SSU72-201ENST00000291386 CAMSAP1Q5T5Y3 1602 aa40.56■■■■■ 4.08
SSU72-201ENST00000291386 ARHGAP31Q2M1Z3 1444 aa40.51■■■■■ 4.08
SSU72-201ENST00000291386 PREX1Q8TCU6 1659 aa40.51■■■■■ 4.08
SSU72-201ENST00000291386 IQGAP3Q86VI3 1631 aa40.45■■■■■ 4.07
SSU72-201ENST00000291386 LMTK3Q96Q04 1460 aa40.45■■■■■ 4.07
SSU72-201ENST00000291386 EFCAB6Q5THR3 1501 aa40.42■■■■■ 4.06
SSU72-201ENST00000291386 TET3O43151 1660 aa40.41■■■■■ 4.06
SSU72-201ENST00000291386 FBXO31Q5XUX0 539 aaPredicted RBP40.41■■■■■ 4.06
SSU72-201ENST00000291386 UHRF1BP1Q6BDS2 1440 aa40.41■■■■■ 4.06
SSU72-201ENST00000291386 SPATA31D1Q6ZQQ2 1576 aa40.4■■■■■ 4.06
SSU72-201ENST00000291386 NUP155O75694 1391 aa40.39■■■■■ 4.06
SSU72-201ENST00000291386 ERVK-7P63135 1459 aa40.37■■■■■ 4.05
SSU72-201ENST00000291386 TNRQ92752 1358 aa40.35■■■■■ 4.05
SSU72-201ENST00000291386 MYO3AQ8NEV4 1616 aa40.35■■■■■ 4.05
SSU72-201ENST00000291386 RPRD2Q5VT52 1461 aaKnown RBP40.33■■■■■ 4.05
SSU72-201ENST00000291386 CFAP65Q6ZU64 1925 aaKnown RBP40.32■■■■■ 4.05
SSU72-201ENST00000291386 SETD5Q9C0A6 1442 aa40.32■■■■■ 4.04
SSU72-201ENST00000291386 ZNF142P52746 1687 aaPredicted RBP40.3■■■■■ 4.04
SSU72-201ENST00000291386 ACIN1Q9UKV3 1341 aaKnown RBP40.27■■■■■ 4.04
SSU72-201ENST00000291386 NLRP1Q9C000 1473 aa40.26■■■■■ 4.03
SSU72-201ENST00000291386 E9PCH4 1651 aa40.25■■■■■ 4.03
SSU72-201ENST00000291386 CEP170BQ9Y4F5 1589 aaPredicted RBP40.24■■■■■ 4.03
SSU72-201ENST00000291386 NOS1P29475 1434 aa40.24■■■■■ 4.03
SSU72-201ENST00000291386 A2ML1A8K2U0 1454 aa40.23■■■■■ 4.03
SSU72-201ENST00000291386 TRIM52Q96A61 297 aa40.19■■■■■ 4.02
SSU72-201ENST00000291386 RAB3GAP2Q9H2M9 1393 aa40.16■■■■■ 4.02
SSU72-201ENST00000291386 HSPA2P54652 639 aa40.16■■■■■ 4.02
SSU72-201ENST00000291386 SYNMO15061 1565 aa40.15■■■■■ 4.02
SSU72-201ENST00000291386 HRCP23327 699 aa40.13■■■■■ 4.01
SSU72-201ENST00000291386 UGGT1Q9NYU2 1555 aa40.07■■■■■ 4.01
SSU72-201ENST00000291386 TRIM26Q12899 539 aaPredicted RBP40.06■■■■■ 4
SSU72-201ENST00000291386 SLC52A1Q9NWF4 448 aa40.06■■■■■ 4
SSU72-201ENST00000291386 SLC4A1APQ9BWU0 796 aaKnown RBP40.05■■■■■ 4
SSU72-201ENST00000291386 PTPRTO14522 1441 aa40.04■■■■■ 4
SSU72-201ENST00000291386 PLA2R1Q13018 1463 aa40.04■■■■■ 4
SSU72-201ENST00000291386 KDM5AP29375 1690 aaKnown RBP40.02■■■■■ 4
SSU72-201ENST00000291386 SPHKAPQ2M3C7 1700 aa40.02■■■■■ 4
SSU72-201ENST00000291386 UBR1Q8IWV7 1749 aa40.02■■■■■ 4
SSU72-201ENST00000291386 PIK3C2BO00750 1634 aa40.02■■■■■ 4
SSU72-201ENST00000291386 IDI1Q13907 227 aa40.01■■■■■ 4
SSU72-201ENST00000291386 PKD2Q13563 968 aa40■■■■□ 3.99
SSU72-201ENST00000291386 THEMISQ8N1K5 641 aaPredicted RBP40■■■■□ 3.99
SSU72-201ENST00000291386 STRCQ7RTU9 1775 aa40■■■■□ 3.99
SSU72-201ENST00000291386 MPHOSPH9Q99550 1183 aa39.98■■■■□ 3.99
SSU72-201ENST00000291386 TRPM2O94759 1503 aa39.92■■■■□ 3.98
SSU72-201ENST00000291386 ADGRB3O60242 1522 aa39.91■■■■□ 3.98
SSU72-201ENST00000291386 SLIT1O75093 1534 aa39.86■■■■□ 3.97
SSU72-201ENST00000291386 STAG3Q9UJ98 1225 aa39.85■■■■□ 3.97
SSU72-201ENST00000291386 ARHGAP23Q9P227 1491 aa39.85■■■■□ 3.97
SSU72-201ENST00000291386 TMEM131LA2VDJ0 1609 aa39.84■■■■□ 3.97
SSU72-201ENST00000291386 POLR1AO95602 1720 aaPredicted RBP39.83■■■■□ 3.97
SSU72-201ENST00000291386 DMRT2Q9Y5R5 561 aa39.83■■■■□ 3.97
SSU72-201ENST00000291386 ANKLE2Q86XL3 938 aa39.8■■■■□ 3.96
SSU72-201ENST00000291386 NCKAP5LQ9HCH0 1330 aa39.8■■■■□ 3.96
SSU72-201ENST00000291386 CLTCL1P53675 1640 aa39.8■■■■□ 3.96
SSU72-201ENST00000291386 FOXD1Q16676 465 aa39.79■■■■□ 3.96
SSU72-201ENST00000291386 TMEM2Q9UHN6 1383 aa39.79■■■■□ 3.96
SSU72-201ENST00000291386 MYO5BQ9ULV0 1848 aa39.78■■■■□ 3.96
SSU72-201ENST00000291386 NEURL4Q96JN8 1562 aa39.76■■■■□ 3.95
SSU72-201ENST00000291386 MED14O60244 1454 aa39.74■■■■□ 3.95
SSU72-201ENST00000291386 KIF1BO60333 1816 aa39.7■■■■□ 3.95
SSU72-201ENST00000291386 SCAF11Q99590 1463 aaKnown RBP39.7■■■■□ 3.95
SSU72-201ENST00000291386 CHGAP10645 457 aaKnown RBP39.68■■■■□ 3.94
SSU72-201ENST00000291386 LTKP29376 864 aa39.67■■■■□ 3.94
SSU72-201ENST00000291386 EID1Q9Y6B2 187 aa39.67■■■■□ 3.94
SSU72-201ENST00000291386 ZFYVE9O95405 1425 aa39.66■■■■□ 3.94
SSU72-201ENST00000291386 TXNDC2Q86VQ3 553 aa39.66■■■■□ 3.94
SSU72-201ENST00000291386 CCDC144AA2RUR9 1427 aa39.65■■■■□ 3.94
SSU72-201ENST00000291386 NPHP4O75161 1426 aaPredicted RBP39.64■■■■□ 3.94
SSU72-201ENST00000291386 RIMS2Q9UQ26 1411 aa39.62■■■■□ 3.93
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms