RNA–Protein interactions for RNA: ENST00000288723.8

RAB28-201, Transcript of RAB28, member RAS oncogene family, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RAB28, Length 1,810 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB28-201ENST00000288723 DUOX2Q9NRD8 1548 aa31.53■■■□□ 2.64
RAB28-201ENST00000288723 WASHC2CQ9Y4E1 1318 aa31.52■■■□□ 2.64
RAB28-201ENST00000288723 UHRF1BP1Q6BDS2 1440 aa31.51■■■□□ 2.63
RAB28-201ENST00000288723 SETD1BQ9UPS6 1966 aaKnown RBP31.5■■■□□ 2.63
RAB28-201ENST00000288723 ANKRD30AQ9BXX3 1397 aa31.49■■■□□ 2.63
RAB28-201ENST00000288723 KDM5DQ9BY66 1539 aa31.47■■■□□ 2.63
RAB28-201ENST00000288723 NPATQ14207 1427 aa31.47■■■□□ 2.63
RAB28-201ENST00000288723 PTPRKQ15262 1439 aa31.46■■■□□ 2.63
RAB28-201ENST00000288723 NCOA1Q15788 1441 aa31.46■■■□□ 2.63
RAB28-201ENST00000288723 EIF2AK4Q9P2K8 1649 aaKnown RBP31.46■■■□□ 2.63
RAB28-201ENST00000288723 RNF17Q9BXT8 1623 aaKnown RBP31.45■■■□□ 2.62
RAB28-201ENST00000288723 ERBINQ96RT1 1412 aa31.43■■■□□ 2.62
RAB28-201ENST00000288723 FBXO31Q5XUX0 539 aaPredicted RBP31.42■■■□□ 2.62
RAB28-201ENST00000288723 ITGAEP38570 1179 aa31.4■■■□□ 2.62
RAB28-201ENST00000288723 MROH1Q8NDA8 1641 aa31.4■■■□□ 2.62
RAB28-201ENST00000288723 ADGRL2O95490 1459 aa31.4■■■□□ 2.62
RAB28-201ENST00000288723 FAM135AQ9P2D6 1515 aa31.39■■■□□ 2.62
RAB28-201ENST00000288723 GRWD1Q9BQ67 446 aaKnown RBP eCLIP31.38■■■□□ 2.61
RAB28-201ENST00000288723 ABCC3O15438 1527 aa31.37■■■□□ 2.61
RAB28-201ENST00000288723 PZPP20742 1482 aa31.35■■■□□ 2.61
RAB28-201ENST00000288723 MYO3AQ8NEV4 1616 aa31.31■■■□□ 2.6
RAB28-201ENST00000288723 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP31.3■■■□□ 2.6
RAB28-201ENST00000288723 CEP152O94986 1710 aa31.29■■■□□ 2.6
RAB28-201ENST00000288723 ZC3H13Q5T200 1668 aaKnown RBP31.29■■■□□ 2.6
RAB28-201ENST00000288723 PRDM15P57071 1507 aaPredicted RBP31.29■■■□□ 2.6
RAB28-201ENST00000288723 TNRQ92752 1358 aa31.29■■■□□ 2.6
RAB28-201ENST00000288723 ANKRD50Q9ULJ7 1429 aa31.28■■■□□ 2.6
RAB28-201ENST00000288723 RRBP1Q9P2E9 1410 aaKnown RBP31.26■■■□□ 2.59
RAB28-201ENST00000288723 DEPDC5O75140 1603 aa31.26■■■□□ 2.59
RAB28-201ENST00000288723 STRCQ7RTU9 1775 aa31.25■■■□□ 2.59
RAB28-201ENST00000288723 CEP170BQ9Y4F5 1589 aaPredicted RBP31.24■■■□□ 2.59
RAB28-201ENST00000288723 ROCK1Q13464 1354 aa31.24■■■□□ 2.59
RAB28-201ENST00000288723 KANK1Q14678 1352 aa31.24■■■□□ 2.59
RAB28-201ENST00000288723 CAMSAP1Q5T5Y3 1602 aa31.23■■■□□ 2.59
RAB28-201ENST00000288723 ZNF142P52746 1687 aaPredicted RBP31.21■■■□□ 2.59
RAB28-201ENST00000288723 A2ML1A8K2U0 1454 aa31.19■■■□□ 2.58
RAB28-201ENST00000288723 CFAP65Q6ZU64 1925 aaKnown RBP31.17■■■□□ 2.58
RAB28-201ENST00000288723 ERVK-7P63135 1459 aa31.17■■■□□ 2.58
RAB28-201ENST00000288723 NCKAP5LQ9HCH0 1330 aa31.16■■■□□ 2.58
RAB28-201ENST00000288723 VWDEQ8N2E2 1590 aa31.16■■■□□ 2.58
RAB28-201ENST00000288723 DMRT2Q9Y5R5 561 aa31.15■■■□□ 2.58
RAB28-201ENST00000288723 SPATA31D1Q6ZQQ2 1576 aa31.15■■■□□ 2.58
RAB28-201ENST00000288723 ARHGAP31Q2M1Z3 1444 aa31.14■■■□□ 2.58
RAB28-201ENST00000288723 LMTK2Q8IWU2 1503 aa31.12■■■□□ 2.57
RAB28-201ENST00000288723 NLRP1Q9C000 1473 aa31.11■■■□□ 2.57
RAB28-201ENST00000288723 PLA2R1Q13018 1463 aa31.08■■■□□ 2.57
RAB28-201ENST00000288723 PTPRTO14522 1441 aa31.06■■■□□ 2.56
RAB28-201ENST00000288723 UGGT1Q9NYU2 1555 aa31.05■■■□□ 2.56
RAB28-201ENST00000288723 PKD2Q13563 968 aa31.04■■■□□ 2.56
RAB28-201ENST00000288723 THEMISQ8N1K5 641 aaPredicted RBP31.04■■■□□ 2.56
RAB28-201ENST00000288723 UNC13BO14795 1591 aa31.04■■■□□ 2.56
RAB28-201ENST00000288723 EFCAB6Q5THR3 1501 aa31.03■■■□□ 2.56
RAB28-201ENST00000288723 NUP155O75694 1391 aa30.99■■■□□ 2.55
RAB28-201ENST00000288723 ILDR1Q86SU0 546 aaPredicted RBP30.97■■■□□ 2.55
RAB28-201ENST00000288723 NAIPQ13075 1403 aa30.97■■■□□ 2.55
RAB28-201ENST00000288723 ANKLE2Q86XL3 938 aa30.96■■■□□ 2.55
RAB28-201ENST00000288723 TET3O43151 1660 aa30.95■■■□□ 2.55
RAB28-201ENST00000288723 IDI1Q13907 227 aa30.94■■■□□ 2.54
RAB28-201ENST00000288723 NOS1P29475 1434 aa30.94■■■□□ 2.54
RAB28-201ENST00000288723 SYNMO15061 1565 aa30.93■■■□□ 2.54
RAB28-201ENST00000288723 IQGAP3Q86VI3 1631 aa30.92■■■□□ 2.54
RAB28-201ENST00000288723 CERKQ8TCT0 537 aa30.91■■■□□ 2.54
RAB28-201ENST00000288723 UBR1Q8IWV7 1749 aa30.91■■■□□ 2.54
RAB28-201ENST00000288723 RPRD2Q5VT52 1461 aaKnown RBP30.91■■■□□ 2.54
RAB28-201ENST00000288723 STAG3Q9UJ98 1225 aa30.9■■■□□ 2.54
RAB28-201ENST00000288723 PIK3C2BO00750 1634 aa30.9■■■□□ 2.54
RAB28-201ENST00000288723 GCC2Q8IWJ2 1684 aa30.89■■■□□ 2.54
RAB28-201ENST00000288723 NEURL4Q96JN8 1562 aa30.89■■■□□ 2.54
RAB28-201ENST00000288723 POLR1AO95602 1720 aaPredicted RBP30.88■■■□□ 2.53
RAB28-201ENST00000288723 HFM1A2PYH4 1435 aa30.88■■■□□ 2.53
RAB28-201ENST00000288723 E9PCH4 1651 aa30.87■■■□□ 2.53
RAB28-201ENST00000288723 ZNF335Q9H4Z2 1342 aaPredicted RBP30.86■■■□□ 2.53
RAB28-201ENST00000288723 SLC52A1Q9NWF4 448 aa30.84■■■□□ 2.53
RAB28-201ENST00000288723 LTKP29376 864 aa30.82■■■□□ 2.52
RAB28-201ENST00000288723 NPHP4O75161 1426 aaPredicted RBP30.82■■■□□ 2.52
RAB28-201ENST00000288723 FBXO41Q8TF61 875 aa30.82■■■□□ 2.52
RAB28-201ENST00000288723 LTBP4Q8N2S1 1624 aa30.81■■■□□ 2.52
RAB28-201ENST00000288723 TXNDC2Q86VQ3 553 aa30.81■■■□□ 2.52
RAB28-201ENST00000288723 TRIM52Q96A61 297 aa30.8■■■□□ 2.52
RAB28-201ENST00000288723 MED14O60244 1454 aa30.79■■■□□ 2.52
RAB28-201ENST00000288723 ARHGAP23Q9P227 1491 aa30.79■■■□□ 2.52
RAB28-201ENST00000288723 SLIT1O75093 1534 aa30.78■■■□□ 2.52
RAB28-201ENST00000288723 TMEM2Q9UHN6 1383 aa30.78■■■□□ 2.52
RAB28-201ENST00000288723 SCAF11Q99590 1463 aaKnown RBP30.76■■■□□ 2.52
RAB28-201ENST00000288723 EID1Q9Y6B2 187 aa30.75■■■□□ 2.51
RAB28-201ENST00000288723 ADGRB3O60242 1522 aa30.75■■■□□ 2.51
RAB28-201ENST00000288723 CHGAP10645 457 aaKnown RBP30.73■■■□□ 2.51
RAB28-201ENST00000288723 KDM5AP29375 1690 aaKnown RBP30.73■■■□□ 2.51
RAB28-201ENST00000288723 IQGAP1P46940 1657 aa30.73■■■□□ 2.51
RAB28-201ENST00000288723 SLC4A1APQ9BWU0 796 aaKnown RBP30.66■■■□□ 2.5
RAB28-201ENST00000288723 TMEM131LA2VDJ0 1609 aa30.66■■■□□ 2.5
RAB28-201ENST00000288723 SENP3Q9H4L4 574 aaPredicted RBP30.66■■■□□ 2.5
RAB28-201ENST00000288723 MYO5BQ9ULV0 1848 aa30.65■■■□□ 2.5
RAB28-201ENST00000288723 SPHKAPQ2M3C7 1700 aa30.62■■■□□ 2.49
RAB28-201ENST00000288723 RIMS2Q9UQ26 1411 aa30.6■■■□□ 2.49
RAB28-201ENST00000288723 NUTM2DQ5VT03 806 aaPredicted RBP30.59■■■□□ 2.49
RAB28-201ENST00000288723 ZFYVE9O95405 1425 aa30.59■■■□□ 2.49
RAB28-201ENST00000288723 SETD5Q9C0A6 1442 aa30.58■■■□□ 2.49
RAB28-201ENST00000288723 BCANQ96GW7 911 aa30.58■■■□□ 2.49
RAB28-201ENST00000288723 SLC26A8Q96RN1 970 aa30.58■■■□□ 2.49
Retrieved 100 of 20,778 RNA–protein pairs in 90.1 ms