RNA–Protein interactions for RNA: ENST00000288368.4

PREX2-201, Transcript of phosphatidylinositol-3,4,5-trisphosphate dependent Rac exchange factor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PREX2, Length 10,750 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PREX2-201ENST00000288368 NUTM2DQ5VT03 806 aaPredicted RBP13.77□□□□□ -0.21
PREX2-201ENST00000288368 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.77□□□□□ -0.21
PREX2-201ENST00000288368 GOLGA6L3A6NEY3 463 aa13.76□□□□□ -0.21
PREX2-201ENST00000288368 PES1O00541 588 aaKnown RBP13.76□□□□□ -0.21
PREX2-201ENST00000288368 SMARCA4P51532 1647 aa13.76□□□□□ -0.21
PREX2-201ENST00000288368 RBM19Q9Y4C8 960 aaKnown RBP13.75□□□□□ -0.21
PREX2-201ENST00000288368 FRAT2O75474 233 aaPredicted RBP13.75□□□□□ -0.21
PREX2-201ENST00000288368 TNNT3P45378 269 aaPredicted RBP13.75□□□□□ -0.21
PREX2-201ENST00000288368 TCEAL9Q9UHQ7 104 aa13.75□□□□□ -0.21
PREX2-201ENST00000288368 CENPJQ9HC77 1338 aaPredicted RBP13.75□□□□□ -0.21
PREX2-201ENST00000288368 TPM3P06753 285 aa13.74□□□□□ -0.21
PREX2-201ENST00000288368 LTV1Q96GA3 475 aaPredicted RBP13.74□□□□□ -0.21
PREX2-201ENST00000288368 CHMP4AQ9BY43 222 aa13.74□□□□□ -0.21
PREX2-201ENST00000288368 EID1Q9Y6B2 187 aa13.74□□□□□ -0.21
PREX2-201ENST00000288368 ST18O60284 1047 aa13.74□□□□□ -0.21
PREX2-201ENST00000288368 MARCH6O60337 910 aa13.73□□□□□ -0.21
PREX2-201ENST00000288368 H3BQV1 296 aa13.73□□□□□ -0.21
PREX2-201ENST00000288368 IFFO2Q5TF58 517 aa13.73□□□□□ -0.21
PREX2-201ENST00000288368 CECR2Q9BXF3 1484 aa13.73□□□□□ -0.21
PREX2-201ENST00000288368 LMOD3Q0VAK6 560 aa13.73□□□□□ -0.21
PREX2-201ENST00000288368 CEP89Q96ST8 783 aa13.73□□□□□ -0.21
PREX2-201ENST00000288368 AMPHP49418 695 aa13.72□□□□□ -0.21
PREX2-201ENST00000288368 NGDNQ8NEJ9 315 aaKnown RBP13.72□□□□□ -0.21
PREX2-201ENST00000288368 HDAC5Q9UQL6 1122 aa13.72□□□□□ -0.21
PREX2-201ENST00000288368 KIF15Q9NS87 1388 aa13.72□□□□□ -0.21
PREX2-201ENST00000288368 TPD52L1Q16890 204 aaPredicted RBP13.72□□□□□ -0.21
PREX2-201ENST00000288368 TCERG1O14776 1098 aaKnown RBP13.71□□□□□ -0.21
PREX2-201ENST00000288368 PDS5BQ9NTI5 1447 aa13.71□□□□□ -0.21
PREX2-201ENST00000288368 GTF2E1P29083 439 aaPredicted RBP13.71□□□□□ -0.21
PREX2-201ENST00000288368 UACAQ9BZF9 1416 aa13.71□□□□□ -0.22
PREX2-201ENST00000288368 USP35Q9P2H5 1018 aa13.7□□□□□ -0.22
PREX2-201ENST00000288368 FHOD3Q2V2M9 1422 aa13.7□□□□□ -0.22
PREX2-201ENST00000288368 PHLDB1Q86UU1 1377 aa13.7□□□□□ -0.22
PREX2-201ENST00000288368 MROH2BQ7Z745 1585 aa13.7□□□□□ -0.22
PREX2-201ENST00000288368 MPHOSPH9Q99550 1183 aa13.69□□□□□ -0.22
PREX2-201ENST00000288368 CCDC144AA2RUR9 1427 aa13.69□□□□□ -0.22
PREX2-201ENST00000288368 CLUAP1Q96AJ1 413 aa13.68□□□□□ -0.22
PREX2-201ENST00000288368 TRIM34Q9BYJ4 488 aa13.68□□□□□ -0.22
PREX2-201ENST00000288368 KIF3AQ9Y496 699 aa13.68□□□□□ -0.22
PREX2-201ENST00000288368 DDX11L8A8MPP1 907 aa13.68□□□□□ -0.22
PREX2-201ENST00000288368 SF3A1Q15459 793 aaKnown RBP13.67□□□□□ -0.22
PREX2-201ENST00000288368 TSR1Q2NL82 804 aaKnown RBP13.67□□□□□ -0.22
PREX2-201ENST00000288368 WASHC2CQ9Y4E1 1318 aa13.67□□□□□ -0.22
PREX2-201ENST00000288368 TPM2P07951 284 aa13.67□□□□□ -0.22
PREX2-201ENST00000288368 RRP7AQ9Y3A4 280 aaKnown RBP13.66□□□□□ -0.22
PREX2-201ENST00000288368 CCAR2Q8N163 923 aaKnown RBP13.66□□□□□ -0.22
PREX2-201ENST00000288368 RAD21O60216 631 aa13.66□□□□□ -0.22
PREX2-201ENST00000288368 MCTP1Q6DN14 999 aa13.66□□□□□ -0.22
PREX2-201ENST00000288368 SETQ01105 290 aaPredicted RBP13.66□□□□□ -0.22
PREX2-201ENST00000288368 AKAP17AQ02040 695 aaKnown RBP13.66□□□□□ -0.22
PREX2-201ENST00000288368 FBXO3Q9UK99 471 aa13.65□□□□□ -0.22
PREX2-201ENST00000288368 CGNL1Q0VF96 1302 aa13.65□□□□□ -0.22
PREX2-201ENST00000288368 CUX1P39880 1505 aa13.65□□□□□ -0.22
PREX2-201ENST00000288368 RILPL2Q969X0 211 aa13.65□□□□□ -0.22
PREX2-201ENST00000288368 C1orf141Q5JVX7 400 aa13.65□□□□□ -0.22
PREX2-201ENST00000288368 CFAP65Q6ZU64 1925 aaKnown RBP13.65□□□□□ -0.22
PREX2-201ENST00000288368 NUTM2FA1L443 756 aa13.65□□□□□ -0.22
PREX2-201ENST00000288368 IPO9Q96P70 1041 aaKnown RBP13.64□□□□□ -0.23
PREX2-201ENST00000288368 TIMELESSQ9UNS1 1208 aa13.64□□□□□ -0.23
PREX2-201ENST00000288368 KANK4Q5T7N3 995 aaPredicted RBP13.64□□□□□ -0.23
PREX2-201ENST00000288368 NOL10Q9BSC4 688 aaKnown RBP13.63□□□□□ -0.23
PREX2-201ENST00000288368 TPM1P09493 284 aa13.63□□□□□ -0.23
PREX2-201ENST00000288368 RAPGEF2Q9Y4G8 1499 aa13.63□□□□□ -0.23
PREX2-201ENST00000288368 KIF3BO15066 747 aa13.63□□□□□ -0.23
PREX2-201ENST00000288368 FOXD4L6Q3SYB3 417 aaPredicted RBP13.63□□□□□ -0.23
PREX2-201ENST00000288368 FOXD4L3Q6VB84 417 aaPredicted RBP13.63□□□□□ -0.23
PREX2-201ENST00000288368 CCDC70Q6NSX1 233 aa13.62□□□□□ -0.23
PREX2-201ENST00000288368 EFCAB2Q5VUJ9 269 aa13.62□□□□□ -0.23
PREX2-201ENST00000288368 FBXW7Q969H0 707 aa13.62□□□□□ -0.23
PREX2-201ENST00000288368 AMOTL1Q8IY63 956 aa13.62□□□□□ -0.23
PREX2-201ENST00000288368 MSH5O43196 834 aa13.61□□□□□ -0.23
PREX2-201ENST00000288368 HNRNPMP52272 730 aaKnown RBP eCLIP13.61□□□□□ -0.23
PREX2-201ENST00000288368 PATL2C9JE40 543 aaKnown RBP13.61□□□□□ -0.23
PREX2-201ENST00000288368 GOLGA6L19H0YKK7 550 aa13.61□□□□□ -0.23
PREX2-201ENST00000288368 DIAPH3Q9NSV4 1193 aa13.61□□□□□ -0.23
PREX2-201ENST00000288368 MEX3CQ5U5Q3 659 aaKnown RBP13.61□□□□□ -0.23
PREX2-201ENST00000288368 CTDP1Q9Y5B0 961 aaPredicted RBP13.61□□□□□ -0.23
PREX2-201ENST00000288368 FAM184AQ8NB25 1140 aa13.61□□□□□ -0.23
PREX2-201ENST00000288368 VPS37DQ86XT2 251 aa13.6□□□□□ -0.23
PREX2-201ENST00000288368 EVA1CP58658 441 aa13.6□□□□□ -0.23
PREX2-201ENST00000288368 ATP6V1DQ9Y5K8 247 aa13.59□□□□□ -0.23
PREX2-201ENST00000288368 NLRP13Q86W25 1043 aa13.59□□□□□ -0.23
PREX2-201ENST00000288368 TTC5Q8N0Z6 440 aa13.59□□□□□ -0.23
PREX2-201ENST00000288368 CNKSR2Q8WXI2 1034 aa13.59□□□□□ -0.23
PREX2-201ENST00000288368 COG3Q96JB2 828 aa13.59□□□□□ -0.23
PREX2-201ENST00000288368 MYBBP1AQ9BQG0 1328 aaKnown RBP13.59□□□□□ -0.23
PREX2-201ENST00000288368 WWC1Q8IX03 1113 aa13.59□□□□□ -0.23
PREX2-201ENST00000288368 SUPT6HQ7KZ85 1726 aaKnown RBP13.58□□□□□ -0.24
PREX2-201ENST00000288368 KRI1Q8N9T8 703 aaKnown RBP13.58□□□□□ -0.24
PREX2-201ENST00000288368 ANO2Q9NQ90 1003 aa13.58□□□□□ -0.24
PREX2-201ENST00000288368 ANKRD45Q5TZF3 282 aa13.58□□□□□ -0.24
PREX2-201ENST00000288368 PCMTD1Q96MG8 357 aaPredicted RBP13.58□□□□□ -0.24
PREX2-201ENST00000288368 C9orf78Q9NZ63 289 aaPredicted RBP13.57□□□□□ -0.24
PREX2-201ENST00000288368 USP47Q96K76 1375 aa13.57□□□□□ -0.24
PREX2-201ENST00000288368 SYNE3Q6ZMZ3 975 aa13.57□□□□□ -0.24
PREX2-201ENST00000288368 LRRFIP1Q32MZ4 808 aaKnown RBP13.57□□□□□ -0.24
PREX2-201ENST00000288368 TDRD9Q8NDG6 1382 aaKnown RBP13.57□□□□□ -0.24
PREX2-201ENST00000288368 NGEFQ8N5V2 710 aa13.56□□□□□ -0.24
PREX2-201ENST00000288368 ROCK1Q13464 1354 aa13.56□□□□□ -0.24
PREX2-201ENST00000288368 APPP05067 770 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms