RNA–Protein interactions for RNA: ENST00000288050.8

PDPR-201, Transcript of pyruvate dehydrogenase phosphatase regulatory subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDPR, Length 9,255 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPR-201ENST00000288050 HSP90AB2PQ58FF8 381 aa12.17□□□□□ -0.46
PDPR-201ENST00000288050 CLASRPQ8N2M8 674 aaKnown RBP12.17□□□□□ -0.46
PDPR-201ENST00000288050 NAP1L1P55209 391 aaKnown RBP12.17□□□□□ -0.46
PDPR-201ENST00000288050 ZNF330Q9Y3S2 320 aaPredicted RBP12.17□□□□□ -0.46
PDPR-201ENST00000288050 TSPYL1Q9H0U9 437 aa12.17□□□□□ -0.46
PDPR-201ENST00000288050 PODXL2Q9NZ53 605 aa12.17□□□□□ -0.46
PDPR-201ENST00000288050 CEP162Q5TB80 1403 aa12.17□□□□□ -0.46
PDPR-201ENST00000288050 H3BQV1 296 aa12.17□□□□□ -0.46
PDPR-201ENST00000288050 IFFO2Q5TF58 517 aa12.17□□□□□ -0.46
PDPR-201ENST00000288050 RTF1Q92541 710 aaKnown RBP12.16□□□□□ -0.46
PDPR-201ENST00000288050 CC2D1BQ5T0F9 858 aaKnown RBP12.15□□□□□ -0.46
PDPR-201ENST00000288050 CARD11Q9BXL7 1154 aa12.15□□□□□ -0.46
PDPR-201ENST00000288050 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.15□□□□□ -0.46
PDPR-201ENST00000288050 CCAR1Q8IX12 1150 aaKnown RBP12.15□□□□□ -0.46
PDPR-201ENST00000288050 ATP6V1DQ9Y5K8 247 aa12.15□□□□□ -0.46
PDPR-201ENST00000288050 LEKR1Q6ZMV7 388 aa12.15□□□□□ -0.46
PDPR-201ENST00000288050 ANKRD18AQ8IVF6 992 aa12.15□□□□□ -0.46
PDPR-201ENST00000288050 HOOK1Q9UJC3 728 aaKnown RBP12.15□□□□□ -0.46
PDPR-201ENST00000288050 ERCC4Q92889 916 aaPredicted RBP12.15□□□□□ -0.47
PDPR-201ENST00000288050 ST18O60284 1047 aa12.14□□□□□ -0.47
PDPR-201ENST00000288050 EZRP15311 586 aaKnown RBP12.14□□□□□ -0.47
PDPR-201ENST00000288050 TAF3Q5VWG9 929 aa12.14□□□□□ -0.47
PDPR-201ENST00000288050 CHMP3Q9Y3E7 222 aa12.14□□□□□ -0.47
PDPR-201ENST00000288050 B4GALNT3Q6L9W6 998 aa12.14□□□□□ -0.47
PDPR-201ENST00000288050 MYO15BQ96JP2 1530 aa12.13□□□□□ -0.47
PDPR-201ENST00000288050 MTERF4Q7Z6M4 381 aaKnown RBP12.13□□□□□ -0.47
PDPR-201ENST00000288050 MNS1Q8NEH6 495 aa12.13□□□□□ -0.47
PDPR-201ENST00000288050 IPO8O15397 1037 aaKnown RBP12.13□□□□□ -0.47
PDPR-201ENST00000288050 KIAA0754O94854 1291 aa12.13□□□□□ -0.47
PDPR-201ENST00000288050 TRIM6-TRIM34B2RNG4 842 aa12.13□□□□□ -0.47
PDPR-201ENST00000288050 CCDC47Q96A33 483 aaKnown RBP12.13□□□□□ -0.47
PDPR-201ENST00000288050 CHMP4CQ96CF2 233 aa12.12□□□□□ -0.47
PDPR-201ENST00000288050 AKAP17AQ02040 695 aaKnown RBP12.12□□□□□ -0.47
PDPR-201ENST00000288050 PKNOX2Q96KN3 472 aa12.12□□□□□ -0.47
PDPR-201ENST00000288050 GIMAP7Q8NHV1 300 aa12.11□□□□□ -0.47
PDPR-201ENST00000288050 ENOX2Q16206 610 aaKnown RBP12.11□□□□□ -0.47
PDPR-201ENST00000288050 TOMM22Q9NS69 142 aa12.1□□□□□ -0.47
PDPR-201ENST00000288050 STK26Q9P289 416 aa12.1□□□□□ -0.47
PDPR-201ENST00000288050 PAF1Q8N7H5 531 aa12.1□□□□□ -0.47
PDPR-201ENST00000288050 CCDC43Q96MW1 224 aaKnown RBP12.1□□□□□ -0.47
PDPR-201ENST00000288050 KANK1Q14678 1352 aa12.1□□□□□ -0.47
PDPR-201ENST00000288050 SKOR2Q2VWA4 1001 aaPredicted RBP12.1□□□□□ -0.47
PDPR-201ENST00000288050 USP8P40818 1118 aa12.1□□□□□ -0.47
PDPR-201ENST00000288050 ZFYVE27Q5T4F4 411 aa12.09□□□□□ -0.47
PDPR-201ENST00000288050 CCNB3Q8WWL7 1395 aa12.09□□□□□ -0.47
PDPR-201ENST00000288050 GOLGA6L10A6NI86 522 aa12.09□□□□□ -0.47
PDPR-201ENST00000288050 PAK3O75914 559 aaPredicted RBP12.09□□□□□ -0.47
PDPR-201ENST00000288050 EPS15P42566 896 aa12.09□□□□□ -0.47
PDPR-201ENST00000288050 SEPT7Q16181 437 aaKnown RBP12.09□□□□□ -0.47
PDPR-201ENST00000288050 NOL8Q76FK4 1167 aaKnown RBP12.09□□□□□ -0.47
PDPR-201ENST00000288050 NF2P35240 595 aa12.09□□□□□ -0.47
PDPR-201ENST00000288050 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.09□□□□□ -0.47
PDPR-201ENST00000288050 MFAP1P55081 439 aaKnown RBP12.09□□□□□ -0.47
PDPR-201ENST00000288050 SRPK2P78362 688 aaKnown RBP12.08□□□□□ -0.48
PDPR-201ENST00000288050 RWDD1Q9H446 243 aaPredicted RBP12.08□□□□□ -0.48
PDPR-201ENST00000288050 CTDP1Q9Y5B0 961 aaPredicted RBP12.08□□□□□ -0.48
PDPR-201ENST00000288050 TIMELESSQ9UNS1 1208 aa12.07□□□□□ -0.48
PDPR-201ENST00000288050 GGT6Q6P531 493 aa12.07□□□□□ -0.48
PDPR-201ENST00000288050 ABCC8Q09428 1581 aa12.07□□□□□ -0.48
PDPR-201ENST00000288050 FRAT2O75474 233 aaPredicted RBP12.07□□□□□ -0.48
PDPR-201ENST00000288050 BAZ1AQ9NRL2 1556 aaPredicted RBP12.07□□□□□ -0.48
PDPR-201ENST00000288050 CUX2O14529 1486 aa12.07□□□□□ -0.48
PDPR-201ENST00000288050 AXDND1Q5T1B0 1012 aaPredicted RBP12.07□□□□□ -0.48
PDPR-201ENST00000288050 ITPRIPQ8IWB1 547 aa12.07□□□□□ -0.48
PDPR-201ENST00000288050 ANKRD62A6NC57 917 aa12.06□□□□□ -0.48
PDPR-201ENST00000288050 DEF6Q9H4E7 631 aa12.06□□□□□ -0.48
PDPR-201ENST00000288050 RALBP1Q15311 655 aa12.06□□□□□ -0.48
PDPR-201ENST00000288050 ERLIN2O94905 339 aa12.06□□□□□ -0.48
PDPR-201ENST00000288050 FAM184AQ8NB25 1140 aa12.06□□□□□ -0.48
PDPR-201ENST00000288050 HDAC5Q9UQL6 1122 aa12.06□□□□□ -0.48
PDPR-201ENST00000288050 R3HCC1Q9Y3T6 440 aaKnown RBP12.06□□□□□ -0.48
PDPR-201ENST00000288050 CEP164Q9UPV0 1460 aa12.06□□□□□ -0.48
PDPR-201ENST00000288050 TRIM34Q9BYJ4 488 aa12.05□□□□□ -0.48
PDPR-201ENST00000288050 PMFBP1Q8TBY8 1022 aa12.05□□□□□ -0.48
PDPR-201ENST00000288050 FOXD4L5Q5VV16 416 aaPredicted RBP12.05□□□□□ -0.48
PDPR-201ENST00000288050 SPATA24Q86W54 205 aa12.05□□□□□ -0.48
PDPR-201ENST00000288050 FOXD4L4Q8WXT5 416 aaPredicted RBP12.05□□□□□ -0.48
PDPR-201ENST00000288050 IFT57Q9NWB7 429 aa12.05□□□□□ -0.48
PDPR-201ENST00000288050 RBM19Q9Y4C8 960 aaKnown RBP12.05□□□□□ -0.48
PDPR-201ENST00000288050 HMGN5P82970 282 aaKnown RBP12.05□□□□□ -0.48
PDPR-201ENST00000288050 DCAF11Q8TEB1 546 aa12.04□□□□□ -0.48
PDPR-201ENST00000288050 FOXD4L1Q9NU39 408 aa12.04□□□□□ -0.48
PDPR-201ENST00000288050 MCTP1Q6DN14 999 aa12.04□□□□□ -0.48
PDPR-201ENST00000288050 CHMP4AQ9BY43 222 aa12.04□□□□□ -0.48
PDPR-201ENST00000288050 CECR2Q9BXF3 1484 aa12.04□□□□□ -0.48
PDPR-201ENST00000288050 CT47B1P0C2W7 299 aaPredicted RBP12.04□□□□□ -0.48
PDPR-201ENST00000288050 EEA1Q15075 1411 aa12.04□□□□□ -0.48
PDPR-201ENST00000288050 SIN3AQ96ST3 1273 aa12.03□□□□□ -0.48
PDPR-201ENST00000288050 CCDC9Q9Y3X0 531 aaKnown RBP12.03□□□□□ -0.48
PDPR-201ENST00000288050 TRIM29Q14134 588 aa12.03□□□□□ -0.48
PDPR-201ENST00000288050 CFAP57Q96MR6 1250 aa12.03□□□□□ -0.48
PDPR-201ENST00000288050 CWC22Q9HCG8 908 aaKnown RBP12.03□□□□□ -0.48
PDPR-201ENST00000288050 SKIDA1Q1XH10 827 aa12.02□□□□□ -0.48
PDPR-201ENST00000288050 CCDC175P0C221 793 aa12.02□□□□□ -0.48
PDPR-201ENST00000288050 CSB-PGBD3P0DP91 1061 aa12.02□□□□□ -0.48
PDPR-201ENST00000288050 CEP63Q96MT8 703 aa12.02□□□□□ -0.48
PDPR-201ENST00000288050 CCDC97Q96F63 343 aaPredicted RBP12.02□□□□□ -0.49
PDPR-201ENST00000288050 AMOTL1Q8IY63 956 aa12.02□□□□□ -0.49
PDPR-201ENST00000288050 DDX49Q9Y6V7 483 aaKnown RBP12.02□□□□□ -0.49
PDPR-201ENST00000288050 OFD1O75665 1012 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms