RNA–Protein interactions for RNA: ENST00000288025.3

TMED6-201, Transcript of transmembrane p24 trafficking protein 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMED6, Length 938 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMED6-201ENST00000288025 CDC42BPAQ5VT25 1732 aa14.32□□□□□ -0.12
TMED6-201ENST00000288025 FYCO1Q9BQS8 1478 aa14.32□□□□□ -0.12
TMED6-201ENST00000288025 CASKIN1Q8WXD9 1431 aa14.32□□□□□ -0.12
TMED6-201ENST00000288025 PAK3O75914 559 aaPredicted RBP14.31□□□□□ -0.12
TMED6-201ENST00000288025 ABCC1P33527 1531 aa14.3□□□□□ -0.12
TMED6-201ENST00000288025 ARHGEF12Q9NZN5 1544 aa14.3□□□□□ -0.12
TMED6-201ENST00000288025 DIP2CQ9Y2E4 1556 aa14.29□□□□□ -0.12
TMED6-201ENST00000288025 ABCA6Q8N139 1617 aa14.29□□□□□ -0.12
TMED6-201ENST00000288025 ESF1Q9H501 851 aaKnown RBP14.28□□□□□ -0.12
TMED6-201ENST00000288025 REREQ9P2R6 1566 aa14.26□□□□□ -0.13
TMED6-201ENST00000288025 GALR2O43603 387 aaPredicted RBP14.26□□□□□ -0.13
TMED6-201ENST00000288025 FBXO41Q8TF61 875 aa14.25□□□□□ -0.13
TMED6-201ENST00000288025 HSPA2P54652 639 aa14.23□□□□□ -0.13
TMED6-201ENST00000288025 SETD1BQ9UPS6 1966 aaKnown RBP14.23□□□□□ -0.13
TMED6-201ENST00000288025 MLH3Q9UHC1 1453 aa14.23□□□□□ -0.13
TMED6-201ENST00000288025 C3P01024 1663 aa14.23□□□□□ -0.13
TMED6-201ENST00000288025 UHRF1BP1Q6BDS2 1440 aa14.23□□□□□ -0.13
TMED6-201ENST00000288025 KIDINS220Q9ULH0 1771 aa14.22□□□□□ -0.13
TMED6-201ENST00000288025 SYCP2Q9BX26 1530 aa14.22□□□□□ -0.13
TMED6-201ENST00000288025 MNX1P50219 401 aaPredicted RBP14.22□□□□□ -0.13
TMED6-201ENST00000288025 AFAP1Q8N556 730 aa14.22□□□□□ -0.13
TMED6-201ENST00000288025 ZNF777Q9ULD5 760 aaPredicted RBP14.21□□□□□ -0.13
TMED6-201ENST00000288025 SAMD9LQ8IVG5 1584 aa14.21□□□□□ -0.14
TMED6-201ENST00000288025 SUPT6HQ7KZ85 1726 aaKnown RBP14.21□□□□□ -0.14
TMED6-201ENST00000288025 MTUS2Q5JR59 1369 aa14.2□□□□□ -0.14
TMED6-201ENST00000288025 PLEKHH2Q8IVE3 1493 aa14.19□□□□□ -0.14
TMED6-201ENST00000288025 TRAPPC8Q9Y2L5 1435 aa14.19□□□□□ -0.14
TMED6-201ENST00000288025 PHF12Q96QT6 1004 aa14.19□□□□□ -0.14
TMED6-201ENST00000288025 AGLP35573 1532 aa14.19□□□□□ -0.14
TMED6-201ENST00000288025 MROH2AA6NES4 1674 aa14.18□□□□□ -0.14
TMED6-201ENST00000288025 EHBP1L1Q8N3D4 1523 aa14.18□□□□□ -0.14
TMED6-201ENST00000288025 CCNB3Q8WWL7 1395 aa14.18□□□□□ -0.14
TMED6-201ENST00000288025 CNTLNQ9NXG0 1405 aa14.17□□□□□ -0.14
TMED6-201ENST00000288025 ATP7AQ04656 1500 aa14.17□□□□□ -0.14
TMED6-201ENST00000288025 PROM2Q8N271 834 aa14.16□□□□□ -0.14
TMED6-201ENST00000288025 ADGBQ8N7X0 1667 aa14.16□□□□□ -0.14
TMED6-201ENST00000288025 INO80Q9ULG1 1556 aaPredicted RBP14.15□□□□□ -0.14
TMED6-201ENST00000288025 CEBPAP49715 358 aaPredicted RBP14.15□□□□□ -0.14
TMED6-201ENST00000288025 SPAG9O60271 1321 aaKnown RBP14.15□□□□□ -0.15
TMED6-201ENST00000288025 CFDP1Q9UEE9 299 aaPredicted RBP14.14□□□□□ -0.15
TMED6-201ENST00000288025 CLTCQ00610 1675 aaKnown RBP14.14□□□□□ -0.15
TMED6-201ENST00000288025 GPATCH8Q9UKJ3 1502 aaKnown RBP14.13□□□□□ -0.15
TMED6-201ENST00000288025 STRCQ7RTU9 1775 aa14.12□□□□□ -0.15
TMED6-201ENST00000288025 TIAM1Q13009 1591 aa14.12□□□□□ -0.15
TMED6-201ENST00000288025 CEP162Q5TB80 1403 aa14.09□□□□□ -0.15
TMED6-201ENST00000288025 KIAA1107Q9UPP5 1409 aa14.09□□□□□ -0.15
TMED6-201ENST00000288025 PLXNC1O60486 1568 aa14.09□□□□□ -0.15
TMED6-201ENST00000288025 A2MP01023 1474 aa14.08□□□□□ -0.16
TMED6-201ENST00000288025 HNRNPMP52272 730 aaKnown RBP eCLIP14.08□□□□□ -0.16
TMED6-201ENST00000288025 CERKQ8TCT0 537 aa14.08□□□□□ -0.16
TMED6-201ENST00000288025 MYO3AQ8NEV4 1616 aa14.08□□□□□ -0.16
TMED6-201ENST00000288025 ZNF142P52746 1687 aaPredicted RBP14.07□□□□□ -0.16
TMED6-201ENST00000288025 NPATQ14207 1427 aa14.06□□□□□ -0.16
TMED6-201ENST00000288025 CAMSAP1Q5T5Y3 1602 aa14.04□□□□□ -0.16
TMED6-201ENST00000288025 CEP170BQ9Y4F5 1589 aaPredicted RBP14.02□□□□□ -0.16
TMED6-201ENST00000288025 CAMSAP2Q08AD1 1489 aa14.02□□□□□ -0.16
TMED6-201ENST00000288025 CCDC141Q6ZP82 1450 aa14.02□□□□□ -0.16
TMED6-201ENST00000288025 PTPRTO14522 1441 aa14.02□□□□□ -0.16
TMED6-201ENST00000288025 GGT6Q6P531 493 aa14.02□□□□□ -0.17
TMED6-201ENST00000288025 OTUD5Q96G74 571 aa14.02□□□□□ -0.17
TMED6-201ENST00000288025 ZMYM3Q14202 1370 aa14.01□□□□□ -0.17
TMED6-201ENST00000288025 NCOA2Q15596 1464 aa14□□□□□ -0.17
TMED6-201ENST00000288025 NCOA1Q15788 1441 aa14□□□□□ -0.17
TMED6-201ENST00000288025 POTEB2H3BUK9 544 aa14□□□□□ -0.17
TMED6-201ENST00000288025 PELP1Q8IZL8 1130 aaKnown RBP14□□□□□ -0.17
TMED6-201ENST00000288025 MS4A3Q96HJ5 214 aa14□□□□□ -0.17
TMED6-201ENST00000288025 RTEL1-TNFRSF6BF6WH68 1400 aa13.99□□□□□ -0.17
TMED6-201ENST00000288025 POLR1AO95602 1720 aaPredicted RBP13.99□□□□□ -0.17
TMED6-201ENST00000288025 ASTLQ6HA08 431 aaPredicted RBP13.98□□□□□ -0.17
TMED6-201ENST00000288025 KDM5DQ9BY66 1539 aa13.98□□□□□ -0.17
TMED6-201ENST00000288025 FAM135AQ9P2D6 1515 aa13.98□□□□□ -0.17
TMED6-201ENST00000288025 TSPYL2Q9H2G4 693 aaPredicted RBP13.96□□□□□ -0.17
TMED6-201ENST00000288025 ARHGEF5Q12774 1597 aa13.96□□□□□ -0.18
TMED6-201ENST00000288025 ZNF644Q9H582 1327 aaPredicted RBP13.95□□□□□ -0.18
TMED6-201ENST00000288025 PLA2R1Q13018 1463 aa13.95□□□□□ -0.18
TMED6-201ENST00000288025 IQSEC2Q5JU85 1478 aa13.95□□□□□ -0.18
TMED6-201ENST00000288025 MBD5Q9P267 1494 aa13.95□□□□□ -0.18
TMED6-201ENST00000288025 VPS8Q8N3P4 1428 aa13.95□□□□□ -0.18
TMED6-201ENST00000288025 ZC3H13Q5T200 1668 aaKnown RBP13.95□□□□□ -0.18
TMED6-201ENST00000288025 ATMINO43313 823 aaPredicted RBP13.94□□□□□ -0.18
TMED6-201ENST00000288025 PTPRKQ15262 1439 aa13.94□□□□□ -0.18
TMED6-201ENST00000288025 RSPH4AQ5TD94 716 aa13.93□□□□□ -0.18
TMED6-201ENST00000288025 SLC39A7Q92504 469 aa13.93□□□□□ -0.18
TMED6-201ENST00000288025 DHX29Q7Z478 1369 aaKnown RBP13.93□□□□□ -0.18
TMED6-201ENST00000288025 KIF3BO15066 747 aa13.92□□□□□ -0.18
TMED6-201ENST00000288025 TSPY4P0CV99 314 aa13.92□□□□□ -0.18
TMED6-201ENST00000288025 TSPY10P0CW01 314 aa13.92□□□□□ -0.18
TMED6-201ENST00000288025 C7P10643 843 aa13.92□□□□□ -0.18
TMED6-201ENST00000288025 CCDC61Q9Y6R9 512 aa13.92□□□□□ -0.18
TMED6-201ENST00000288025 A2ML1A8K2U0 1454 aa13.92□□□□□ -0.18
TMED6-201ENST00000288025 LRRC9Q6ZRR7 1453 aa13.92□□□□□ -0.18
TMED6-201ENST00000288025 DNMT1P26358 1616 aaKnown RBP13.91□□□□□ -0.18
TMED6-201ENST00000288025 LTBP4Q8N2S1 1624 aa13.91□□□□□ -0.18
TMED6-201ENST00000288025 EIF2AK4Q9P2K8 1649 aaKnown RBP13.91□□□□□ -0.18
TMED6-201ENST00000288025 PLEKHG5O94827 1062 aa13.91□□□□□ -0.18
TMED6-201ENST00000288025 PKD2Q13563 968 aa13.91□□□□□ -0.18
TMED6-201ENST00000288025 METRNQ9UJH8 293 aa13.91□□□□□ -0.18
TMED6-201ENST00000288025 PZPP20742 1482 aa13.9□□□□□ -0.18
TMED6-201ENST00000288025 SPATA31D1Q6ZQQ2 1576 aa13.9□□□□□ -0.18
TMED6-201ENST00000288025 NCKAP5LQ9HCH0 1330 aa13.9□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms