RNA–Protein interactions for RNA: ENST00000287814.4

TIMP4-201, Transcript of TIMP metallopeptidase inhibitor 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TIMP4, Length 1,650 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP4-201ENST00000287814 ROCK1Q13464 1354 aa30.24■■■□□ 2.43
TIMP4-201ENST00000287814 PPP6R1Q9UPN7 881 aa30.22■■■□□ 2.43
TIMP4-201ENST00000287814 EIF2AK4Q9P2K8 1649 aaKnown RBP30.21■■■□□ 2.43
TIMP4-201ENST00000287814 CNTLNQ9NXG0 1405 aa30.19■■■□□ 2.42
TIMP4-201ENST00000287814 RNF17Q9BXT8 1623 aaKnown RBP30.18■■■□□ 2.42
TIMP4-201ENST00000287814 ANKRD50Q9ULJ7 1429 aa30.17■■■□□ 2.42
TIMP4-201ENST00000287814 ZMYM3Q14202 1370 aa30.17■■■□□ 2.42
TIMP4-201ENST00000287814 MROH1Q8NDA8 1641 aa30.16■■■□□ 2.42
TIMP4-201ENST00000287814 CLTCQ00610 1675 aaKnown RBP30.16■■■□□ 2.42
TIMP4-201ENST00000287814 WASHC2CQ9Y4E1 1318 aa30.15■■■□□ 2.42
TIMP4-201ENST00000287814 GRWD1Q9BQ67 446 aaKnown RBP eCLIP30.12■■■□□ 2.41
TIMP4-201ENST00000287814 C3P01024 1663 aa30.11■■■□□ 2.41
TIMP4-201ENST00000287814 KDM5DQ9BY66 1539 aa30.1■■■□□ 2.41
TIMP4-201ENST00000287814 MROH2AA6NES4 1674 aa30.09■■■□□ 2.41
TIMP4-201ENST00000287814 DEPDC5O75140 1603 aa30.07■■■□□ 2.4
TIMP4-201ENST00000287814 ABCC3O15438 1527 aa30.06■■■□□ 2.4
TIMP4-201ENST00000287814 PRDM15P57071 1507 aaPredicted RBP30.06■■■□□ 2.4
TIMP4-201ENST00000287814 FAM135AQ9P2D6 1515 aa30.06■■■□□ 2.4
TIMP4-201ENST00000287814 NAIPQ13075 1403 aa30.05■■■□□ 2.4
TIMP4-201ENST00000287814 FBXO31Q5XUX0 539 aaPredicted RBP30.01■■■□□ 2.39
TIMP4-201ENST00000287814 VWDEQ8N2E2 1590 aa29.99■■■□□ 2.39
TIMP4-201ENST00000287814 CEP152O94986 1710 aa29.99■■■□□ 2.39
TIMP4-201ENST00000287814 HFM1A2PYH4 1435 aa29.99■■■□□ 2.39
TIMP4-201ENST00000287814 KANK1Q14678 1352 aa29.98■■■□□ 2.39
TIMP4-201ENST00000287814 ZC3H13Q5T200 1668 aaKnown RBP29.97■■■□□ 2.39
TIMP4-201ENST00000287814 NPATQ14207 1427 aa29.97■■■□□ 2.39
TIMP4-201ENST00000287814 PZPP20742 1482 aa29.96■■■□□ 2.39
TIMP4-201ENST00000287814 LMTK3Q96Q04 1460 aa29.94■■■□□ 2.38
TIMP4-201ENST00000287814 UNC13BO14795 1591 aa29.94■■■□□ 2.38
TIMP4-201ENST00000287814 GCC2Q8IWJ2 1684 aa29.93■■■□□ 2.38
TIMP4-201ENST00000287814 LMTK2Q8IWU2 1503 aa29.92■■■□□ 2.38
TIMP4-201ENST00000287814 CAMSAP1Q5T5Y3 1602 aa29.92■■■□□ 2.38
TIMP4-201ENST00000287814 SETD1BQ9UPS6 1966 aaKnown RBP29.91■■■□□ 2.38
TIMP4-201ENST00000287814 NUP155O75694 1391 aa29.89■■■□□ 2.38
TIMP4-201ENST00000287814 ARHGAP31Q2M1Z3 1444 aa29.89■■■□□ 2.37
TIMP4-201ENST00000287814 HSPA2P54652 639 aa29.88■■■□□ 2.37
TIMP4-201ENST00000287814 UHRF1BP1Q6BDS2 1440 aa29.87■■■□□ 2.37
TIMP4-201ENST00000287814 PREX1Q8TCU6 1659 aa29.87■■■□□ 2.37
TIMP4-201ENST00000287814 TNRQ92752 1358 aa29.85■■■□□ 2.37
TIMP4-201ENST00000287814 ERVK-7P63135 1459 aa29.83■■■□□ 2.37
TIMP4-201ENST00000287814 EFCAB6Q5THR3 1501 aa29.82■■■□□ 2.36
TIMP4-201ENST00000287814 IQGAP3Q86VI3 1631 aa29.81■■■□□ 2.36
TIMP4-201ENST00000287814 SPATA31D1Q6ZQQ2 1576 aa29.81■■■□□ 2.36
TIMP4-201ENST00000287814 CFAP65Q6ZU64 1925 aaKnown RBP29.81■■■□□ 2.36
TIMP4-201ENST00000287814 MYO3AQ8NEV4 1616 aa29.78■■■□□ 2.36
TIMP4-201ENST00000287814 SETD5Q9C0A6 1442 aa29.78■■■□□ 2.36
TIMP4-201ENST00000287814 TET3O43151 1660 aa29.78■■■□□ 2.36
TIMP4-201ENST00000287814 TRIM52Q96A61 297 aa29.77■■■□□ 2.36
TIMP4-201ENST00000287814 NOS1P29475 1434 aa29.72■■■□□ 2.35
TIMP4-201ENST00000287814 RPRD2Q5VT52 1461 aaKnown RBP29.72■■■□□ 2.35
TIMP4-201ENST00000287814 CEP170BQ9Y4F5 1589 aaPredicted RBP29.72■■■□□ 2.35
TIMP4-201ENST00000287814 A2ML1A8K2U0 1454 aa29.71■■■□□ 2.35
TIMP4-201ENST00000287814 RAB3GAP2Q9H2M9 1393 aa29.7■■■□□ 2.35
TIMP4-201ENST00000287814 NLRP1Q9C000 1473 aa29.7■■■□□ 2.35
TIMP4-201ENST00000287814 E9PCH4 1651 aa29.7■■■□□ 2.35
TIMP4-201ENST00000287814 ZNF142P52746 1687 aaPredicted RBP29.7■■■□□ 2.34
TIMP4-201ENST00000287814 SYNMO15061 1565 aa29.68■■■□□ 2.34
TIMP4-201ENST00000287814 IDI1Q13907 227 aa29.65■■■□□ 2.34
TIMP4-201ENST00000287814 SLC4A1APQ9BWU0 796 aaKnown RBP29.64■■■□□ 2.34
TIMP4-201ENST00000287814 PKD2Q13563 968 aa29.63■■■□□ 2.33
TIMP4-201ENST00000287814 UGGT1Q9NYU2 1555 aa29.61■■■□□ 2.33
TIMP4-201ENST00000287814 MPHOSPH9Q99550 1183 aa29.59■■■□□ 2.33
TIMP4-201ENST00000287814 SLC52A1Q9NWF4 448 aa29.59■■■□□ 2.33
TIMP4-201ENST00000287814 THEMISQ8N1K5 641 aaPredicted RBP29.58■■■□□ 2.33
TIMP4-201ENST00000287814 TRIM26Q12899 539 aaPredicted RBP29.57■■■□□ 2.32
TIMP4-201ENST00000287814 STRCQ7RTU9 1775 aa29.57■■■□□ 2.32
TIMP4-201ENST00000287814 PTPRTO14522 1441 aa29.56■■■□□ 2.32
TIMP4-201ENST00000287814 PIK3C2BO00750 1634 aa29.56■■■□□ 2.32
TIMP4-201ENST00000287814 FOXD1Q16676 465 aa29.56■■■□□ 2.32
TIMP4-201ENST00000287814 NCKAP5LQ9HCH0 1330 aa29.56■■■□□ 2.32
TIMP4-201ENST00000287814 HRCP23327 699 aa29.55■■■□□ 2.32
TIMP4-201ENST00000287814 PLA2R1Q13018 1463 aa29.54■■■□□ 2.32
TIMP4-201ENST00000287814 ACIN1Q9UKV3 1341 aaKnown RBP29.53■■■□□ 2.32
TIMP4-201ENST00000287814 UBR1Q8IWV7 1749 aa29.53■■■□□ 2.32
TIMP4-201ENST00000287814 STAG3Q9UJ98 1225 aa29.5■■■□□ 2.31
TIMP4-201ENST00000287814 SPHKAPQ2M3C7 1700 aa29.49■■■□□ 2.31
TIMP4-201ENST00000287814 ADGRB3O60242 1522 aa29.45■■■□□ 2.31
TIMP4-201ENST00000287814 ANKLE2Q86XL3 938 aa29.45■■■□□ 2.31
TIMP4-201ENST00000287814 TRPM2O94759 1503 aa29.44■■■□□ 2.3
TIMP4-201ENST00000287814 CHGAP10645 457 aaKnown RBP29.44■■■□□ 2.3
TIMP4-201ENST00000287814 ARHGAP23Q9P227 1491 aa29.43■■■□□ 2.3
TIMP4-201ENST00000287814 LTKP29376 864 aa29.43■■■□□ 2.3
TIMP4-201ENST00000287814 DMRT2Q9Y5R5 561 aa29.43■■■□□ 2.3
TIMP4-201ENST00000287814 TMEM2Q9UHN6 1383 aa29.43■■■□□ 2.3
TIMP4-201ENST00000287814 KDM5AP29375 1690 aaKnown RBP29.42■■■□□ 2.3
TIMP4-201ENST00000287814 SLIT1O75093 1534 aa29.41■■■□□ 2.3
TIMP4-201ENST00000287814 TMEM131LA2VDJ0 1609 aa29.41■■■□□ 2.3
TIMP4-201ENST00000287814 CLTCL1P53675 1640 aa29.4■■■□□ 2.3
TIMP4-201ENST00000287814 NEURL4Q96JN8 1562 aa29.39■■■□□ 2.3
TIMP4-201ENST00000287814 TXNDC2Q86VQ3 553 aa29.39■■■□□ 2.3
TIMP4-201ENST00000287814 MYO5BQ9ULV0 1848 aa29.37■■■□□ 2.29
TIMP4-201ENST00000287814 POLR1AO95602 1720 aaPredicted RBP29.35■■■□□ 2.29
TIMP4-201ENST00000287814 MED14O60244 1454 aa29.34■■■□□ 2.29
TIMP4-201ENST00000287814 SCAF11Q99590 1463 aaKnown RBP29.34■■■□□ 2.29
TIMP4-201ENST00000287814 EID1Q9Y6B2 187 aa29.34■■■□□ 2.29
TIMP4-201ENST00000287814 NPHP4O75161 1426 aaPredicted RBP29.32■■■□□ 2.28
TIMP4-201ENST00000287814 ZFYVE9O95405 1425 aa29.32■■■□□ 2.28
TIMP4-201ENST00000287814 RIMS2Q9UQ26 1411 aa29.3■■■□□ 2.28
TIMP4-201ENST00000287814 NUTM2DQ5VT03 806 aaPredicted RBP29.28■■■□□ 2.28
TIMP4-201ENST00000287814 CCDC144AA2RUR9 1427 aa29.28■■■□□ 2.28
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms