RNA–Protein interactions for RNA: ENST00000285398.6

ERCC3-201, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ERCC3, Length 2,750 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-201ENST00000285398 MPHOSPH9Q99550 1183 aa14.5□□□□□ -0.09
ERCC3-201ENST00000285398 SLC4A1APQ9BWU0 796 aaKnown RBP14.5□□□□□ -0.09
ERCC3-201ENST00000285398 GCC2Q8IWJ2 1684 aa14.5□□□□□ -0.09
ERCC3-201ENST00000285398 DEKP35659 375 aaKnown RBP14.49□□□□□ -0.09
ERCC3-201ENST00000285398 ERICH6BQ5W0A0 696 aa14.49□□□□□ -0.09
ERCC3-201ENST00000285398 ADGBQ8N7X0 1667 aa14.49□□□□□ -0.09
ERCC3-201ENST00000285398 NUP155O75694 1391 aa14.47□□□□□ -0.09
ERCC3-201ENST00000285398 PPRC1Q5VV67 1664 aaKnown RBP14.47□□□□□ -0.09
ERCC3-201ENST00000285398 NEO1Q92859 1461 aa14.47□□□□□ -0.09
ERCC3-201ENST00000285398 DENND4BO75064 1496 aaPredicted RBP14.46□□□□□ -0.09
ERCC3-201ENST00000285398 POGZQ7Z3K3 1410 aa14.46□□□□□ -0.09
ERCC3-201ENST00000285398 ZFYVE16Q7Z3T8 1539 aa14.46□□□□□ -0.1
ERCC3-201ENST00000285398 ZNF518AQ6AHZ1 1483 aa14.45□□□□□ -0.1
ERCC3-201ENST00000285398 CFAP74Q9C0B2 1584 aa14.45□□□□□ -0.1
ERCC3-201ENST00000285398 MAST1Q9Y2H9 1570 aa14.45□□□□□ -0.1
ERCC3-201ENST00000285398 KIF3BO15066 747 aa14.45□□□□□ -0.1
ERCC3-201ENST00000285398 COL17A1Q9UMD9 1497 aaPredicted RBP14.44□□□□□ -0.1
ERCC3-201ENST00000285398 PKD2Q13563 968 aa14.44□□□□□ -0.1
ERCC3-201ENST00000285398 ATP7AQ04656 1500 aa14.44□□□□□ -0.1
ERCC3-201ENST00000285398 YEATS2Q9ULM3 1422 aa14.42□□□□□ -0.1
ERCC3-201ENST00000285398 HIRIP3Q9BW71 556 aaPredicted RBP14.41□□□□□ -0.1
ERCC3-201ENST00000285398 PZPP20742 1482 aa14.41□□□□□ -0.1
ERCC3-201ENST00000285398 RTEL1-TNFRSF6BF6WH68 1400 aa14.41□□□□□ -0.1
ERCC3-201ENST00000285398 TEX14Q8IWB6 1497 aa14.4□□□□□ -0.1
ERCC3-201ENST00000285398 GGT6Q6P531 493 aa14.4□□□□□ -0.1
ERCC3-201ENST00000285398 PPP4R2Q9NY27 417 aa14.4□□□□□ -0.1
ERCC3-201ENST00000285398 PLXNC1O60486 1568 aa14.4□□□□□ -0.1
ERCC3-201ENST00000285398 INO80Q9ULG1 1556 aaPredicted RBP14.4□□□□□ -0.1
ERCC3-201ENST00000285398 KIDINS220Q9ULH0 1771 aa14.39□□□□□ -0.11
ERCC3-201ENST00000285398 EIF5BO60841 1220 aaKnown RBP14.39□□□□□ -0.11
ERCC3-201ENST00000285398 KDM5CP41229 1560 aa14.39□□□□□ -0.11
ERCC3-201ENST00000285398 HNRNPUQ00839 825 aaKnown RBP eCLIP14.39□□□□□ -0.11
ERCC3-201ENST00000285398 DUOX2Q9NRD8 1548 aa14.38□□□□□ -0.11
ERCC3-201ENST00000285398 RICTORQ6R327 1708 aa14.38□□□□□ -0.11
ERCC3-201ENST00000285398 FRMPD1Q5SYB0 1578 aa14.37□□□□□ -0.11
ERCC3-201ENST00000285398 IRX6P78412 446 aaPredicted RBP14.36□□□□□ -0.11
ERCC3-201ENST00000285398 DHX29Q7Z478 1369 aaKnown RBP14.36□□□□□ -0.11
ERCC3-201ENST00000285398 MLH3Q9UHC1 1453 aa14.36□□□□□ -0.11
ERCC3-201ENST00000285398 TONSLQ96HA7 1378 aa14.36□□□□□ -0.11
ERCC3-201ENST00000285398 NOP58Q9Y2X3 529 aaKnown RBP14.35□□□□□ -0.11
ERCC3-201ENST00000285398 ERBINQ96RT1 1412 aa14.35□□□□□ -0.11
ERCC3-201ENST00000285398 HECW2Q9P2P5 1572 aa14.35□□□□□ -0.11
ERCC3-201ENST00000285398 A2MP01023 1474 aa14.34□□□□□ -0.11
ERCC3-201ENST00000285398 MLECQ14165 292 aa14.34□□□□□ -0.11
ERCC3-201ENST00000285398 ABCA6Q8N139 1617 aa14.33□□□□□ -0.11
ERCC3-201ENST00000285398 FAM135AQ9P2D6 1515 aa14.33□□□□□ -0.12
ERCC3-201ENST00000285398 ANKRD30BQ9BXX2 1392 aa14.32□□□□□ -0.12
ERCC3-201ENST00000285398 DIP2CQ9Y2E4 1556 aa14.29□□□□□ -0.12
ERCC3-201ENST00000285398 NBR1Q14596 966 aa14.28□□□□□ -0.12
ERCC3-201ENST00000285398 L3MBTL2Q969R5 705 aa14.27□□□□□ -0.12
ERCC3-201ENST00000285398 ZMYM4Q5VZL5 1548 aa14.27□□□□□ -0.12
ERCC3-201ENST00000285398 UNC13BO14795 1591 aa14.27□□□□□ -0.13
ERCC3-201ENST00000285398 WASHC2CQ9Y4E1 1318 aa14.27□□□□□ -0.13
ERCC3-201ENST00000285398 ARID4BQ4LE39 1312 aaPredicted RBP14.26□□□□□ -0.13
ERCC3-201ENST00000285398 RGL3Q3MIN7 710 aa14.26□□□□□ -0.13
ERCC3-201ENST00000285398 KDM5DQ9BY66 1539 aa14.26□□□□□ -0.13
ERCC3-201ENST00000285398 ANO8Q9HCE9 1232 aaPredicted RBP14.26□□□□□ -0.13
ERCC3-201ENST00000285398 ZNF326Q5BKZ1 582 aaKnown RBP14.25□□□□□ -0.13
ERCC3-201ENST00000285398 RTL5Q5HYW3 569 aaPredicted RBP14.25□□□□□ -0.13
ERCC3-201ENST00000285398 MAGI2Q86UL8 1455 aa14.25□□□□□ -0.13
ERCC3-201ENST00000285398 KANK1Q14678 1352 aa14.24□□□□□ -0.13
ERCC3-201ENST00000285398 PLA2R1Q13018 1463 aa14.24□□□□□ -0.13
ERCC3-201ENST00000285398 MROH1Q8NDA8 1641 aa14.24□□□□□ -0.13
ERCC3-201ENST00000285398 PLEKHG5O94827 1062 aa14.23□□□□□ -0.13
ERCC3-201ENST00000285398 B4GALNT3Q6L9W6 998 aa14.23□□□□□ -0.13
ERCC3-201ENST00000285398 ATP10AO60312 1499 aa14.23□□□□□ -0.13
ERCC3-201ENST00000285398 KDM2AQ9Y2K7 1162 aa14.22□□□□□ -0.13
ERCC3-201ENST00000285398 WASHC2AQ641Q2 1341 aa14.22□□□□□ -0.13
ERCC3-201ENST00000285398 DEPDC5O75140 1603 aa14.22□□□□□ -0.13
ERCC3-201ENST00000285398 IQGAP3Q86VI3 1631 aa14.22□□□□□ -0.13
ERCC3-201ENST00000285398 PAK3O75914 559 aaPredicted RBP14.22□□□□□ -0.13
ERCC3-201ENST00000285398 SIGLEC1Q9BZZ2 1709 aa14.22□□□□□ -0.13
ERCC3-201ENST00000285398 EIF2AK4Q9P2K8 1649 aaKnown RBP14.21□□□□□ -0.13
ERCC3-201ENST00000285398 CFAP65Q6ZU64 1925 aaKnown RBP14.21□□□□□ -0.13
ERCC3-201ENST00000285398 ANP32AP39687 249 aaKnown RBP14.21□□□□□ -0.13
ERCC3-201ENST00000285398 RPRD2Q5VT52 1461 aaKnown RBP14.21□□□□□ -0.13
ERCC3-201ENST00000285398 CNTLNQ9NXG0 1405 aa14.2□□□□□ -0.14
ERCC3-201ENST00000285398 PRDM15P57071 1507 aaPredicted RBP14.19□□□□□ -0.14
ERCC3-201ENST00000285398 IPO9Q96P70 1041 aaKnown RBP14.19□□□□□ -0.14
ERCC3-201ENST00000285398 CCDC144AA2RUR9 1427 aa14.19□□□□□ -0.14
ERCC3-201ENST00000285398 SENP3Q9H4L4 574 aaPredicted RBP14.18□□□□□ -0.14
ERCC3-201ENST00000285398 FBXO31Q5XUX0 539 aaPredicted RBP14.18□□□□□ -0.14
ERCC3-201ENST00000285398 E9PCH4 1651 aa14.17□□□□□ -0.14
ERCC3-201ENST00000285398 VWDEQ8N2E2 1590 aa14.17□□□□□ -0.14
ERCC3-201ENST00000285398 UGGT1Q9NYU2 1555 aa14.17□□□□□ -0.14
ERCC3-201ENST00000285398 ARHGEF40Q8TER5 1519 aa14.17□□□□□ -0.14
ERCC3-201ENST00000285398 NBPF8Q3BBV2 869 aa14.17□□□□□ -0.14
ERCC3-201ENST00000285398 DCAF11Q8TEB1 546 aa14.17□□□□□ -0.14
ERCC3-201ENST00000285398 CEP152O94986 1710 aa14.17□□□□□ -0.14
ERCC3-201ENST00000285398 ZBED9Q6R2W3 1325 aa14.17□□□□□ -0.14
ERCC3-201ENST00000285398 HSPA5P11021 654 aaKnown RBP14.17□□□□□ -0.14
ERCC3-201ENST00000285398 ZBTB47Q9UFB7 747 aaPredicted RBP14.17□□□□□ -0.14
ERCC3-201ENST00000285398 RNF17Q9BXT8 1623 aaKnown RBP14.17□□□□□ -0.14
ERCC3-201ENST00000285398 NPATQ14207 1427 aa14.17□□□□□ -0.14
ERCC3-201ENST00000285398 CHGAP10645 457 aaKnown RBP14.17□□□□□ -0.14
ERCC3-201ENST00000285398 SALL2Q9Y467 1007 aaPredicted RBP14.16□□□□□ -0.14
ERCC3-201ENST00000285398 BCORL1Q5H9F3 1711 aa14.14□□□□□ -0.15
ERCC3-201ENST00000285398 ABCC3O15438 1527 aa14.14□□□□□ -0.15
ERCC3-201ENST00000285398 CCDC184Q52MB2 194 aa14.14□□□□□ -0.15
ERCC3-201ENST00000285398 TET3O43151 1660 aa14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms