RNA–Protein interactions for RNA: ENST00000274254.9

SKP2-201, Transcript of S-phase kinase associated protein 2, humanhuman

TSL 1 (best) BASIC

Gene SKP2, Length 1,537 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP2-201ENST00000274254 UNC13BO14795 1591 aa25.66■■□□□ 1.7
SKP2-201ENST00000274254 MROH1Q8NDA8 1641 aa25.65■■□□□ 1.7
SKP2-201ENST00000274254 ACIN1Q9UKV3 1341 aaKnown RBP25.64■■□□□ 1.7
SKP2-201ENST00000274254 PRDM15P57071 1507 aaPredicted RBP25.63■■□□□ 1.69
SKP2-201ENST00000274254 ARID4BQ4LE39 1312 aaPredicted RBP25.62■■□□□ 1.69
SKP2-201ENST00000274254 GGT6Q6P531 493 aa25.6■■□□□ 1.69
SKP2-201ENST00000274254 KDM5DQ9BY66 1539 aa25.59■■□□□ 1.69
SKP2-201ENST00000274254 VWDEQ8N2E2 1590 aa25.58■■□□□ 1.69
SKP2-201ENST00000274254 NUP155O75694 1391 aa25.58■■□□□ 1.68
SKP2-201ENST00000274254 GRWD1Q9BQ67 446 aaKnown RBP eCLIP25.57■■□□□ 1.681e-6■■□□□ 12.2
SKP2-201ENST00000274254 TRIM52Q96A61 297 aa25.56■■□□□ 1.68
SKP2-201ENST00000274254 PPP6R1Q9UPN7 881 aa25.56■■□□□ 1.68
SKP2-201ENST00000274254 IQGAP3Q86VI3 1631 aa25.55■■□□□ 1.68
SKP2-201ENST00000274254 KANK1Q14678 1352 aa25.54■■□□□ 1.68
SKP2-201ENST00000274254 MLECQ14165 292 aa25.54■■□□□ 1.68
SKP2-201ENST00000274254 FAM135AQ9P2D6 1515 aa25.53■■□□□ 1.68
SKP2-201ENST00000274254 PZPP20742 1482 aa25.53■■□□□ 1.68
SKP2-201ENST00000274254 ABCC3O15438 1527 aa25.51■■□□□ 1.67
SKP2-201ENST00000274254 LMTK2Q8IWU2 1503 aa25.51■■□□□ 1.67
SKP2-201ENST00000274254 ZC3H13Q5T200 1668 aaKnown RBP25.49■■□□□ 1.67
SKP2-201ENST00000274254 WASHC2CQ9Y4E1 1318 aa25.49■■□□□ 1.67
SKP2-201ENST00000274254 CEP152O94986 1710 aa25.48■■□□□ 1.67
SKP2-201ENST00000274254 MPHOSPH9Q99550 1183 aa25.47■■□□□ 1.67
SKP2-201ENST00000274254 ADAMTSL3P82987 1691 aa25.46■■□□□ 1.67
SKP2-201ENST00000274254 TET3O43151 1660 aa25.45■■□□□ 1.66
SKP2-201ENST00000274254 SLC4A1APQ9BWU0 796 aaKnown RBP25.45■■□□□ 1.66
SKP2-201ENST00000274254 CNTLNQ9NXG0 1405 aa25.43■■□□□ 1.66
SKP2-201ENST00000274254 CLTCQ00610 1675 aaKnown RBP25.43■■□□□ 1.66
SKP2-201ENST00000274254 FER1L4A9Z1Z3 1794 aa25.43■■□□□ 1.66
SKP2-201ENST00000274254 DHX57Q6P158 1386 aaKnown RBP25.42■■□□□ 1.66
SKP2-201ENST00000274254 CAMSAP1Q5T5Y3 1602 aa25.42■■□□□ 1.66
SKP2-201ENST00000274254 EFCAB6Q5THR3 1501 aa25.42■■□□□ 1.66
SKP2-201ENST00000274254 MADDQ8WXG6 1647 aa25.41■■□□□ 1.66
SKP2-201ENST00000274254 ESF1Q9H501 851 aaKnown RBP25.4■■□□□ 1.66
SKP2-201ENST00000274254 ARHGAP31Q2M1Z3 1444 aa25.4■■□□□ 1.66
SKP2-201ENST00000274254 MROH2AA6NES4 1674 aa25.39■■□□□ 1.66
SKP2-201ENST00000274254 PKD2Q13563 968 aa25.38■■□□□ 1.65
SKP2-201ENST00000274254 NPATQ14207 1427 aa25.37■■□□□ 1.65
SKP2-201ENST00000274254 E9PCH4 1651 aa25.37■■□□□ 1.65
SKP2-201ENST00000274254 RPRD2Q5VT52 1461 aaKnown RBP25.37■■□□□ 1.65
SKP2-201ENST00000274254 ZMYM3Q14202 1370 aa25.36■■□□□ 1.65
SKP2-201ENST00000274254 RIMS1Q86UR5 1692 aaKnown RBP25.33■■□□□ 1.65
SKP2-201ENST00000274254 FOXD1Q16676 465 aa25.32■■□□□ 1.64
SKP2-201ENST00000274254 C3P01024 1663 aa25.29■■□□□ 1.64
SKP2-201ENST00000274254 KDM4FA0A1W2PPD8 638 aa25.28■■□□□ 1.64
SKP2-201ENST00000274254 PTPRTO14522 1441 aa25.28■■□□□ 1.64
SKP2-201ENST00000274254 NOS1P29475 1434 aa25.27■■□□□ 1.64
SKP2-201ENST00000274254 CFAP65Q6ZU64 1925 aaKnown RBP25.26■■□□□ 1.63
SKP2-201ENST00000274254 PLA2R1Q13018 1463 aa25.26■■□□□ 1.63
SKP2-201ENST00000274254 ANKRD30BQ9BXX2 1392 aa25.26■■□□□ 1.63
SKP2-201ENST00000274254 PREX1Q8TCU6 1659 aa25.25■■□□□ 1.63
SKP2-201ENST00000274254 PTPRMP28827 1452 aa25.25■■□□□ 1.63
SKP2-201ENST00000274254 ERVK-7P63135 1459 aa25.25■■□□□ 1.63
SKP2-201ENST00000274254 FBXO31Q5XUX0 539 aaPredicted RBP25.25■■□□□ 1.63
SKP2-201ENST00000274254 SPATA31D1Q6ZQQ2 1576 aa25.25■■□□□ 1.63
SKP2-201ENST00000274254 SPHKAPQ2M3C7 1700 aa25.24■■□□□ 1.63
SKP2-201ENST00000274254 CEBPAP49715 358 aaPredicted RBP25.24■■□□□ 1.63
SKP2-201ENST00000274254 TRPM2O94759 1503 aa25.22■■□□□ 1.63
SKP2-201ENST00000274254 CCER1Q8TC90 406 aaPredicted RBP25.22■■□□□ 1.63
SKP2-201ENST00000274254 SYNMO15061 1565 aa25.2■■□□□ 1.62
SKP2-201ENST00000274254 CLSPNQ9HAW4 1339 aa25.2■■□□□ 1.62
SKP2-201ENST00000274254 TNRQ92752 1358 aa25.15■■□□□ 1.62
SKP2-201ENST00000274254 PIK3C2BO00750 1634 aa25.14■■□□□ 1.62
SKP2-201ENST00000274254 UGGT1Q9NYU2 1555 aa25.14■■□□□ 1.61
SKP2-201ENST00000274254 CCDC144AA2RUR9 1427 aa25.13■■□□□ 1.61
SKP2-201ENST00000274254 PLPPR3Q6T4P5 718 aa25.13■■□□□ 1.61
SKP2-201ENST00000274254 CLTCL1P53675 1640 aa25.13■■□□□ 1.61
SKP2-201ENST00000274254 SLC52A1Q9NWF4 448 aa25.12■■□□□ 1.61
SKP2-201ENST00000274254 SETD1BQ9UPS6 1966 aaKnown RBP25.11■■□□□ 1.61
SKP2-201ENST00000274254 IDI1Q13907 227 aa25.09■■□□□ 1.61
SKP2-201ENST00000274254 SIN3AQ96ST3 1273 aa25.09■■□□□ 1.61
SKP2-201ENST00000274254 NLRP1Q9C000 1473 aa25.08■■□□□ 1.61
SKP2-201ENST00000274254 MYO3AQ8NEV4 1616 aa25.05■■□□□ 1.6
SKP2-201ENST00000274254 KIF1BO60333 1816 aa25.02■■□□□ 1.6
SKP2-201ENST00000274254 NEURL4Q96JN8 1562 aa25.02■■□□□ 1.6
SKP2-201ENST00000274254 SPATA31E1Q6ZUB1 1445 aa25.02■■□□□ 1.6
SKP2-201ENST00000274254 NEUROD1Q13562 356 aa25.01■■□□□ 1.59
SKP2-201ENST00000274254 ADGRB3O60242 1522 aa25■■□□□ 1.59
SKP2-201ENST00000274254 TMEM131LA2VDJ0 1609 aa25■■□□□ 1.59
SKP2-201ENST00000274254 KDM5AP29375 1690 aaKnown RBP24.99■■□□□ 1.59
SKP2-201ENST00000274254 A2ML1A8K2U0 1454 aa24.99■■□□□ 1.59
SKP2-201ENST00000274254 CEP170BQ9Y4F5 1589 aaPredicted RBP24.98■■□□□ 1.59
SKP2-201ENST00000274254 ZNF142P52746 1687 aaPredicted RBP24.98■■□□□ 1.59
SKP2-201ENST00000274254 UBR1Q8IWV7 1749 aa24.97■■□□□ 1.59
SKP2-201ENST00000274254 UHRF1BP1Q6BDS2 1440 aa24.96■■□□□ 1.59
SKP2-201ENST00000274254 MYO5BQ9ULV0 1848 aa24.94■■□□□ 1.58
SKP2-201ENST00000274254 CHGAP10645 457 aaKnown RBP24.94■■□□□ 1.58
SKP2-201ENST00000274254 STAG3Q9UJ98 1225 aa24.93■■□□□ 1.58
SKP2-201ENST00000274254 RGL3Q3MIN7 710 aa24.91■■□□□ 1.58
SKP2-201ENST00000274254 TIMELESSQ9UNS1 1208 aa24.9■■□□□ 1.58
SKP2-201ENST00000274254 TONSLQ96HA7 1378 aa24.89■■□□□ 1.58
SKP2-201ENST00000274254 THEMISQ8N1K5 641 aaPredicted RBP24.87■■□□□ 1.57
SKP2-201ENST00000274254 L3MBTL2Q969R5 705 aa24.87■■□□□ 1.57
SKP2-201ENST00000274254 RPGRIP1LQ68CZ1 1315 aa24.87■■□□□ 1.57
SKP2-201ENST00000274254 ZNF326Q5BKZ1 582 aaKnown RBP24.86■■□□□ 1.57
SKP2-201ENST00000274254 LMTK3Q96Q04 1460 aa24.86■■□□□ 1.57
SKP2-201ENST00000274254 NEXMIFQ5QGS0 1516 aa24.86■■□□□ 1.57
SKP2-201ENST00000274254 TMEM2Q9UHN6 1383 aa24.85■■□□□ 1.57
SKP2-201ENST00000274254 SLIT1O75093 1534 aa24.85■■□□□ 1.57
SKP2-201ENST00000274254 IFT172Q9UG01 1749 aa24.85■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms