RNA–Protein interactions for RNA: ENST00000273156.11

SEC22C-202, Transcript of SEC22 homolog C, vesicle trafficking protein, humanhuman

TSL 1 (best) BASIC

Gene SEC22C, Length 1,608 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22C-202ENST00000273156 KDM5DQ9BY66 1539 aa26.87■■□□□ 1.89
SEC22C-202ENST00000273156 PTPN23Q9H3S7 1636 aa26.86■■□□□ 1.89
SEC22C-202ENST00000273156 ABCC5O15440 1437 aa26.85■■□□□ 1.89
SEC22C-202ENST00000273156 TCOF1Q13428 1488 aaKnown RBP26.85■■□□□ 1.89
SEC22C-202ENST00000273156 FBXO41Q8TF61 875 aa26.83■■□□□ 1.89
SEC22C-202ENST00000273156 RRBP1Q9P2E9 1410 aaKnown RBP26.83■■□□□ 1.89
SEC22C-202ENST00000273156 DUOX2Q9NRD8 1548 aa26.82■■□□□ 1.88
SEC22C-202ENST00000273156 PTPRTO14522 1441 aa26.81■■□□□ 1.88
SEC22C-202ENST00000273156 DAPK1P53355 1430 aa26.81■■□□□ 1.88
SEC22C-202ENST00000273156 KIF15Q9NS87 1388 aa26.81■■□□□ 1.88
SEC22C-202ENST00000273156 PZPP20742 1482 aa26.8■■□□□ 1.88
SEC22C-202ENST00000273156 NCOA1Q15788 1441 aa26.8■■□□□ 1.88
SEC22C-202ENST00000273156 EIF2AK4Q9P2K8 1649 aaKnown RBP26.79■■□□□ 1.88
SEC22C-202ENST00000273156 RRP7BPQ9NSQ0 103 aa26.78■■□□□ 1.88
SEC22C-202ENST00000273156 TNRQ92752 1358 aa26.77■■□□□ 1.88
SEC22C-202ENST00000273156 ERBINQ96RT1 1412 aa26.77■■□□□ 1.88
SEC22C-202ENST00000273156 ANKRD30AQ9BXX3 1397 aa26.77■■□□□ 1.88
SEC22C-202ENST00000273156 RNF17Q9BXT8 1623 aaKnown RBP26.76■■□□□ 1.87
SEC22C-202ENST00000273156 PKD2Q13563 968 aa26.76■■□□□ 1.87
SEC22C-202ENST00000273156 STRCQ7RTU9 1775 aa26.75■■□□□ 1.87
SEC22C-202ENST00000273156 DNMT1P26358 1616 aaKnown RBP26.75■■□□□ 1.87
SEC22C-202ENST00000273156 FBXO31Q5XUX0 539 aaPredicted RBP26.75■■□□□ 1.87
SEC22C-202ENST00000273156 MYO3AQ8NEV4 1616 aa26.74■■□□□ 1.87
SEC22C-202ENST00000273156 CEP170BQ9Y4F5 1589 aaPredicted RBP26.74■■□□□ 1.87
SEC22C-202ENST00000273156 CERKQ8TCT0 537 aa26.74■■□□□ 1.87
SEC22C-202ENST00000273156 CAMSAP1Q5T5Y3 1602 aa26.74■■□□□ 1.87
SEC22C-202ENST00000273156 A2ML1A8K2U0 1454 aa26.74■■□□□ 1.87
SEC22C-202ENST00000273156 PLA2R1Q13018 1463 aa26.74■■□□□ 1.87
SEC22C-202ENST00000273156 FAM50AQ14320 339 aaKnown RBP26.73■■□□□ 1.87
SEC22C-202ENST00000273156 ZNF142P52746 1687 aaPredicted RBP26.71■■□□□ 1.87
SEC22C-202ENST00000273156 CROCC2H7BZ55 1655 aa26.71■■□□□ 1.87
SEC22C-202ENST00000273156 ABCC3O15438 1527 aa26.71■■□□□ 1.87
SEC22C-202ENST00000273156 CHIC2Q9UKJ5 165 aa26.69■■□□□ 1.86
SEC22C-202ENST00000273156 ZC3H13Q5T200 1668 aaKnown RBP26.68■■□□□ 1.86
SEC22C-202ENST00000273156 NLRP1Q9C000 1473 aa26.67■■□□□ 1.86
SEC22C-202ENST00000273156 KANK1Q14678 1352 aa26.66■■□□□ 1.86
SEC22C-202ENST00000273156 THEMISQ8N1K5 641 aaPredicted RBP26.66■■□□□ 1.86
SEC22C-202ENST00000273156 NCKAP5LQ9HCH0 1330 aa26.66■■□□□ 1.86
SEC22C-202ENST00000273156 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP26.64■■□□□ 1.85
SEC22C-202ENST00000273156 ADGRL2O95490 1459 aa26.63■■□□□ 1.85
SEC22C-202ENST00000273156 MROH1Q8NDA8 1641 aa26.63■■□□□ 1.85
SEC22C-202ENST00000273156 PRDM15P57071 1507 aaPredicted RBP26.62■■□□□ 1.85
SEC22C-202ENST00000273156 GRWD1Q9BQ67 446 aaKnown RBP eCLIP26.61■■□□□ 1.85
SEC22C-202ENST00000273156 ARHGAP31Q2M1Z3 1444 aa26.61■■□□□ 1.85
SEC22C-202ENST00000273156 ANKLE2Q86XL3 938 aa26.58■■□□□ 1.85
SEC22C-202ENST00000273156 SPATA31D1Q6ZQQ2 1576 aa26.58■■□□□ 1.85
SEC22C-202ENST00000273156 ERVK-7P63135 1459 aa26.58■■□□□ 1.85
SEC22C-202ENST00000273156 UGGT1Q9NYU2 1555 aa26.55■■□□□ 1.84
SEC22C-202ENST00000273156 ITGAEP38570 1179 aa26.54■■□□□ 1.84
SEC22C-202ENST00000273156 DEPDC5O75140 1603 aa26.54■■□□□ 1.84
SEC22C-202ENST00000273156 ANKRD50Q9ULJ7 1429 aa26.54■■□□□ 1.84
SEC22C-202ENST00000273156 ROCK1Q13464 1354 aa26.51■■□□□ 1.83
SEC22C-202ENST00000273156 LMTK2Q8IWU2 1503 aa26.5■■□□□ 1.83
SEC22C-202ENST00000273156 HRCP23327 699 aa26.5■■□□□ 1.83
SEC22C-202ENST00000273156 CEP152O94986 1710 aa26.49■■□□□ 1.83
SEC22C-202ENST00000273156 LTBP4Q8N2S1 1624 aa26.49■■□□□ 1.83
SEC22C-202ENST00000273156 IQSEC2Q5JU85 1478 aa26.48■■□□□ 1.83
SEC22C-202ENST00000273156 ZNF335Q9H4Z2 1342 aaPredicted RBP26.46■■□□□ 1.83
SEC22C-202ENST00000273156 VWDEQ8N2E2 1590 aa26.46■■□□□ 1.83
SEC22C-202ENST00000273156 MED14O60244 1454 aa26.43■■□□□ 1.82
SEC22C-202ENST00000273156 NPHP4O75161 1426 aaPredicted RBP26.41■■□□□ 1.82
SEC22C-202ENST00000273156 CCER1Q8TC90 406 aaPredicted RBP26.41■■□□□ 1.82
SEC22C-202ENST00000273156 STAG3Q9UJ98 1225 aa26.4■■□□□ 1.82
SEC22C-202ENST00000273156 POLR1AO95602 1720 aaPredicted RBP26.39■■□□□ 1.82
SEC22C-202ENST00000273156 NEURL4Q96JN8 1562 aa26.39■■□□□ 1.82
SEC22C-202ENST00000273156 SLC52A1Q9NWF4 448 aa26.39■■□□□ 1.81
SEC22C-202ENST00000273156 RPRD2Q5VT52 1461 aaKnown RBP26.38■■□□□ 1.81
SEC22C-202ENST00000273156 EID1Q9Y6B2 187 aa26.38■■□□□ 1.81
SEC22C-202ENST00000273156 EFCAB6Q5THR3 1501 aa26.38■■□□□ 1.81
SEC22C-202ENST00000273156 ZEB1P37275 1124 aaPredicted RBP26.37■■□□□ 1.81
SEC22C-202ENST00000273156 NOS1P29475 1434 aa26.35■■□□□ 1.81
SEC22C-202ENST00000273156 IDI1Q13907 227 aa26.35■■□□□ 1.81
SEC22C-202ENST00000273156 TXNDC2Q86VQ3 553 aa26.34■■□□□ 1.81
SEC22C-202ENST00000273156 SCAF11Q99590 1463 aaKnown RBP26.33■■□□□ 1.81
SEC22C-202ENST00000273156 CPS1P31327 1500 aa26.32■■□□□ 1.8
SEC22C-202ENST00000273156 UBR1Q8IWV7 1749 aa26.32■■□□□ 1.8
SEC22C-202ENST00000273156 ARHGAP23Q9P227 1491 aa26.32■■□□□ 1.8
SEC22C-202ENST00000273156 SLIT1O75093 1534 aa26.32■■□□□ 1.8
SEC22C-202ENST00000273156 CFAP65Q6ZU64 1925 aaKnown RBP26.32■■□□□ 1.8
SEC22C-202ENST00000273156 TMEM2Q9UHN6 1383 aa26.31■■□□□ 1.8
SEC22C-202ENST00000273156 SETD5Q9C0A6 1442 aa26.3■■□□□ 1.8
SEC22C-202ENST00000273156 UNC13BO14795 1591 aa26.29■■□□□ 1.8
SEC22C-202ENST00000273156 LTKP29376 864 aa26.28■■□□□ 1.8
SEC22C-202ENST00000273156 IQGAP1P46940 1657 aa26.27■■□□□ 1.8
SEC22C-202ENST00000273156 NUP155O75694 1391 aa26.27■■□□□ 1.8
SEC22C-202ENST00000273156 UBAP1LF5GYI3 381 aa26.27■■□□□ 1.8
SEC22C-202ENST00000273156 TET3O43151 1660 aa26.27■■□□□ 1.8
SEC22C-202ENST00000273156 KDM5AP29375 1690 aaKnown RBP26.27■■□□□ 1.8
SEC22C-202ENST00000273156 PIK3C2BO00750 1634 aa26.26■■□□□ 1.79
SEC22C-202ENST00000273156 SYNMO15061 1565 aa26.25■■□□□ 1.79
SEC22C-202ENST00000273156 RAB3GAP2Q9H2M9 1393 aa26.24■■□□□ 1.79
SEC22C-202ENST00000273156 HDGFP51858 240 aaKnown RBP26.23■■□□□ 1.79
SEC22C-202ENST00000273156 ADGRB3O60242 1522 aa26.2■■□□□ 1.78
SEC22C-202ENST00000273156 HFM1A2PYH4 1435 aa26.2■■□□□ 1.78
SEC22C-202ENST00000273156 TOM1O60784 492 aa26.2■■□□□ 1.78
SEC22C-202ENST00000273156 IQGAP3Q86VI3 1631 aa26.19■■□□□ 1.78
SEC22C-202ENST00000273156 GCC2Q8IWJ2 1684 aa26.18■■□□□ 1.78
SEC22C-202ENST00000273156 NAIPQ13075 1403 aa26.14■■□□□ 1.77
SEC22C-202ENST00000273156 ABCF1Q8NE71 845 aaKnown RBP eCLIP26.13■■□□□ 1.77
SEC22C-202ENST00000273156 DHX57Q6P158 1386 aaKnown RBP26.12■■□□□ 1.77
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms